Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01-
09] 8 sequences; 7,757,162 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq1 100 2e-16
seq5 84.2 2e-11
>seq1
Length=1515123
Score = 100 bits (110), Expect = 2e-16
Identities = 146/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTG 48582
|| || ||||||||||| ||||||||||| || || || || || | |||||||||||
Sbjct 1006385 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTC-GCTAAGCGTGCGGCCATCCTCCAGCTG 1006327
Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642
||| ||| | | || | |||||| || ||| || | || ||||||||| ||| ||
Sbjct 1006326 CTTGCCGGCAAAGATCAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGAATCTT 1006267
Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702
||||| | | || || || | ||||| ||||| || || || || |||||
Sbjct 1006266 GGCCTTGACATTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTTGCCGGT 1006207
Query 48703 GAGAGTTTTCACAAAAATCTGCAT 48726
|||||| || ||||| || |||||
Sbjct 1006206 GAGAGTCTTGACAAAGATTTGCAT 1006183
Score = 98.7 bits (108), Expect = 8e-16
Identities = 148/208 (71%), Gaps = 2/208 (1%)
Strand=Plus/Minus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTG 48582
|| || ||||||||||| ||||||||||| || || || || ||| | |||||||||||
Sbjct 1005929 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTC-GCTAAGCGTGCGCCCATCCTCCAGCTG 1005871
Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642
||| ||| | |||| | |||||| |||||| || | || ||||||||| ||| ||
Sbjct 1005870 CTTGCCGGCAAAAATCAGACGCTGTTGATCCGGAGGAATACCCTCCTTGTCCTGAATCTT 1005811
Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702
||||| | || || || | || || ||||| || || || || || ||
Sbjct 1005810 GGCCTTGACGTTGTCAATCGTGTCCGACGATTCGACCTCGAGAGTGATCGTCTTGCCAGT 1005751
Query 48703 GAGAGTTTTCACAAAAATCTGCATCGTG 48730
||| || || ||||| || ||||| |||
Sbjct 1005750 GAGGGTCTTAACAAAGATTTGCATTGTG 1005723
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/208 (71%), Gaps = 10/208 (5%)
Strand=Plus/Minus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTG 48582
|| || ||||||||||| ||||||||||| || || || || ||| | |||||||||||
Sbjct 1006157 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTC-GCTAAGCGTGCGCCCATCCTCCAGCTG 1006099
Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642
||| ||| | |||| |||||||| |||||| || | | ||||||||| || ||
Sbjct 1006098 CTTGCCGGCAAAAATCAAACGCTGTTGATCCGGAGGAATGCCCTCCTTGTCCTGGATCTT 1006039
Query 48643 CTGCTTGATAGACG----CTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTAC 48698
||| | |||| | || || || | || || |||| || || || || |
Sbjct 1006038 -GGCT---TTGACGTTGTCAATCGTGTCCGACGATTCGACTTCGAGAGTGATCGTCTTGC 1005983
Query 48699 CGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|||||||||| || ||||| || |||||
Sbjct 1005982 CGGTGAGAGTCTTGACAAAGATTTGCAT 1005955
>seq5
Length=679138
Score = 84.2 bits (92), Expect = 2e-11
Identities = 161/234 (69%), Gaps = 4/234 (2%)
Strand=Plus/Plus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTG 48582
|| || ||||||||||| || |||||||| || || | || || | |||||||||||
Sbjct 231797 TGGAGCGTGCTCTCCTTCTGGATGTTGTAGTC-GCTCAGCGTGCGACCATCCTCCAGCTG 231855
Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642
||| ||| || | || | ||||| || ||| || | || ||||||||| || ||
Sbjct 231856 CTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTT 231915
Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702
||| | | | | || || |||| ||||||| ||||| || || || || |||||
Sbjct 231916 GGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTTCCCGGT 231975
Query 48703 GAGAGTTTTCACAAAAATCTGCATCGTGTCT--TGATCGAAGAAAGAGTGATGT 48754
|| || || || || | ||||| || || | | | || |||| ||| |||
Sbjct 231976 AAGGGTCTTGACGAACACTTGCATGGTAACTGCTAACCAAACAAAGTGTGGTGT 232029
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421251158928008
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |