Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01- 09] 8 sequences; 7,757,162 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq8 269 7e-67 >seq8 Length=447081 Score = 269 bits (298), Expect = 7e-67 Identities = 629/936 (67%), Gaps = 36/936 (4%) Strand=Plus/Plus Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAACGCCCGCAG 363459 |||||| | ||| |||||||| || |||||||| | ||| || ||||| ||| Sbjct 57214 AAGACGCTCGAGCGCTCCTACCTGCTGCGGATCAATGGCAAGGTTGCGGAGCGCCCCCAG 57273 Query 363460 CATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCGATTGAA 363519 || ||| | ||||| || || | || ||||| || ||| || | |||||| || Sbjct 57274 CACATGCTCATGCGCGTCGCCGTCGGCATCCACGGCGAGGACGTGGCGAGCGCGATCGAG 57333 Query 363520 ACATATAAGCTTCTAAGTGCTCGTGTA----TTCACGCACGCCACGCCAACAATGTACAA 363575 || || || ||| || || | | || || ||||| |||| || ||| ||| Sbjct 57334 ACGTACAA----CTACATGTCCGAGAAGGCCTTTACACACGCGTCGCCGACCCTGTTCAA 57389 Query 363576 TGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTC 363635 ||| || || | || || || ||||| || ||||| ||| | | ||||||||||| || Sbjct 57390 TGCCGGCACGCCCAACCCCCAAATGTCGTCGTGCTTCCTTGTGAGTATGAAGGACGACTC 57449 Query 363636 CATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGG 363695 ||||||||||| | ||||| || |||| ||||| | || ||||| || ||||| Sbjct 57450 GATCGAGGGTATATACGACACGCTCAAGACCTGTGCGATGATCAGCAAGACGGCCGGCGG 57509 Query 363696 AATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTACATTCGCGGCAC-AGGGG 363754 |||||| | |||||||| ||||||| | | ||||| |||||| | || Sbjct 57510 TATTGGTCTGAACATCCACAACATTCGTGCGACGGGCTCGTACATCGCCGGCACGAACGG 57569 Query 363755 GATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCG 363814 | | || || | || |||||||| || |||| |||| || ||| | ||||| | Sbjct 57570 TGTGAGC-AACGGTATTGTGCCCATGCTCCGCGTGTACAACAACACGGCGCGCTACGTGG 57628 Query 363815 ACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCG 363874 ||||||| || |||||| || || ||||| || || || ||||| || | | Sbjct 57629 ACCAGGGCGGCAACAAGCGCCCGGGCGCCTTTGCGATCTACCTGGAGCCGTGGCACTCGG 57688 Query 363875 ATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTG 363934 | ||||||| ||| |||| || || || ||| || || |||||| |||| || || | Sbjct 57689 ACGTTTTTGAATTTATTGATCTGCGCAAGAACCATGGCAAGGAGGAAGTGCGCGCGCGCG 57748 Query 363935 ATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAG- 363993 | |||||| || || ||| || | || | || ||| || || || ||| | Sbjct 57749 ACCTGTTCCTGGCGCTGTGGATTCCCGATCTGTTCATGCGCCGTGTCGA-ACAGAACGGC 57807 Query 363994 AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGA-TG-TATGGGGTGACG 364051 | ||||| || | ||||| ||| || |||||||| | || || ||| || || | Sbjct 57808 GACTGGTCGCTGATGTGCCCCGCCGAGTGCCCAGGTCTGGCTGACTGCTAT--GGCGAGG 57865 Query 364052 ACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGG-------AAAGGCTCGTAAGACA 364104 | | || |||||| ||||| ||||| || ||||| || |||| | || Sbjct 57866 AGTTTGATGCTCTGTACGAGAAGTACGAGCGCGAGGGCCGCGCCAAGCGCTC---TGTCA 57922 Query 364105 ATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCC 364164 | || |||||||| |||| || ||| | || |||| |||||||| || | || Sbjct 57923 A----GGCGCAGAAGCTGTGGTACGCTATCCTCGAGGCGCAAATTGAGACGGGCAATCCT 57978 Query 364165 TATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATT 364224 | | | ||||||| || ||| ||||||||| |||||| || |||| || || | | Sbjct 57979 TTTGTCCTGTACAAGGACTCGGCGAACCGCAAGAGTAACCAGAAGAACCTGGGCACGA-T 58037 Query 364225 CAGCAGAGC---AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCC 364281 || ||||| ||||| || || |||||||| || |||| | | || |||||||| || Sbjct 58038 CA--AGAGCTCGAACCTCTGCACGGAGATTATCGAGTACAGCTCGCCGGACGAGACAGCT 58095 Query 364282 GTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTT 364317 || || ||||| |||||||| || || ||| ||||| Sbjct 58096 GTGTGCAACCTGGCGTCGATTGCTCTGCCGACGTTT 58131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353466406256