Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01- 09] 8 sequences; 7,757,162 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq8 232 6e-56 seq4 129 6e-25 seq5 123 2e-23 seq1 116 3e-21 >seq8 Length=447081 Score = 232 bits (256), Expect = 6e-56 Identities = 356/503 (71%), Gaps = 15/503 (3%) Strand=Plus/Minus Query 46100 AGAAAACCGACTGGGCGATGAAGTGGATCA---ACAGCAGCACCGCGACTTTCGCCGAGC 46156 |||| |||| ||||| || |||||| |||| || || || ||| | |||| Sbjct 45478 AGAAGGCCGAGTGGGCCCTGCGCTGGATCTCGGACAGGCGCGCCTCG---TTCTCGGAGC 45422 Query 46157 GTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCT 46216 | | ||||||||||| || |||||| ||||||| || ||| |||||| |||||| Sbjct 45421 GCCTTGTGGCCTTTGCCGCCGTCGAGGGCATCTTTTTCTCGGGCTCGTTTGCCTCCATCT 45362 Query 46217 TTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGC 46276 | | |||| | ||| ||||||| || ||| |||| |||||||| || |||| Sbjct 45361 TCTGGCTCAAGAAGCGCGGCCTCATGCCTGGTCTGTCGTTCTCGAACGAGCTCATCTCGC 45302 Query 46277 GCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACTCGCGTGCACGACA 46336 |||||||||||||||| || |||||||| |||||| || | || | | || | | Sbjct 45301 GCGACGAGGGCCTGCACACCGACTTTGCCTGTCTC--CTGTT-CAGCCACCTGAAG---A 45248 Query 46337 AGCTTGCGCCC---GACACCGTGCTGAGCATGTTCAAGGAGGCGGTGGCCATTGAGAAGG 46393 ||| ||||| | ||||| ||| |||| ||| ||||| |||||||||||| ||| Sbjct 45247 AGCGTGCGCACCCTGACACGGTGAACCGCATCATCACCGAGGCTGTGGCCATTGAGCAGG 45188 Query 46394 AGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAGTCAATGTGCG 46453 | ||||| || | ||| |||| | | | ||| | ||||||||||| | |||||| Sbjct 45187 ACTTTTTGACCGACGCCTTGCCTGTTTCGCTGATCGGCATGAACGCGCGCCTCATGTGCC 45128 Query 46454 ACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCCGAAGCATTTTC 46513 | |||||||||||||| |||||||| |||||||| | || | | |||||||| | Sbjct 45127 AGTACATCGAGTTTGTGGCGGACCGTCTGCTCGTCAACCTCGGCAACCCGAAGCACTACA 45068 Query 46514 ACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAACTAATTTTT 46573 || || || || || || |||||| | |||||||| || ||||||| | || |||| Sbjct 45067 ACTCGACGAACCCCTTCGACTTTATGGAGAACATCTCGCTCCAGGGCAAGTCGAACTTTT 45008 Query 46574 TCGAAAAGCGCGTCGGCGAGTAT 46596 |||| ||||| | ||| ||| Sbjct 45007 TCGAGCGCCGCGTTGCCGACTAT 44985 Score = 181 bits (200), Expect = 1e-40 Identities = 937/1457 (64%), Gaps = 51/1457 (4%) Strand=Plus/Minus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||| ||||| ||||| ||||| | |||||| |||| || | ||| |||| | || Sbjct 58691 TTGACCACCTGGAACTCACCGGCAAGCACACGGCGCATGTAAATGTTGCTCGTGTACGGC 58632 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 ||||| ||||||| ||| ||||| ||| || | || || |||||| ||||| | Sbjct 58631 TCAAAGCACTCGTTGAAGCCAAGGATCTGACTCGTGGAGGCCGTCGGCATGGGCGCCATC 58572 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | | || |||||||| ||||||| || | | |||| |||| |||| ||||| Sbjct 58571 AGCAGCGAGTTGCGCAGACCGTGCTGGGCAATCTTTGCCTTGAGCGAGGCCCAGTCCCAC 58512 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297 || | |||| | || ||||||||||||||||| | ||||| ||| |||||| Sbjct 58511 AGGTCCGACGGCGTGCGGTTCCACATGTCGTACTGCAGGAGGCCCTGCGAGGCAGGGCTG 58452 Query 145298 CCTTGAAAGGAACTGTAACTGCCCCAAGTTTTG--GCGAGCTCGCAACTCGCCTCCAGAG 145355 || | | | ||| || ||| || | || |||||||| || ||||| || Sbjct 58451 CCCTCGTACGTCTCGTA--TGTGCCATATTCGGCCGCCAGCTCGCAGCTGCGCTCCA-AG 58395 Query 145356 CGCCGAA--ATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTC 145413 |||| | ||||| ||||| || ||| || ||||| ||| || | ||| || Sbjct 58394 -GCCGCATGGTAAATGGTCTCAAAGATCTGCACATTCAGCAGGCGCGCCTCCTGGCTGTC 58336 Query 145414 GTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGG 145473 | |||| || || | | || |||||||| || ||||| | || | |||||||| Sbjct 58335 GAACGGATAGCCCATGATCATGAACGCATCGGCAAGGCCCTGGACACCGATACCGATGGG 58276 Query 145474 CCGATGTTTCATGTT-GCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATAA 145532 || || |||||| | | | | || ||| | ||| || || ||||| | Sbjct 58275 GCGGTGCCGCATGTTCGAGCGACGT-GCACTCTCCACAGGGTAGTAGTTGATATCGATGA 58217 Query 145533 TTTTATTCAAGTT-TCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAA- 145590 | |||| ||| | |||| || || || | | || ||| || |||| | Sbjct 58216 TGCGGTTCAGGTTCTTGCAC-ACCACTTTCGACACGTCGTGCAGGCGTTGGAAGTTGTAT 58158 Query 145591 ----CCGA-GCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAA 145645 ||| || || | | | | | | | || |||||||||| || || Sbjct 58157 GTCTTCGAGGCACCGGTGCCCTCAATAAACGTCGGCAGAGCAATCGACGCCAGGTTGCAC 58098 Query 145646 ACTGCCGTCTCCT-CGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTT 145704 || || ||||| | ||||| |||||| | | ||||| | ||| | || | || Sbjct 58097 ACAGCTGTCTCGTCCGGCG-AGCTGTACTCGATAATCTCCGTGCAGAGGTTCGAGCTCTT 58039 Query 145705 GATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTA 145764 ||| || ||||| || | ||| ||||| || | ||| || ||||||||| || | | Sbjct 58038 GATCGTGCCCAGGTTCTTCTGGTTACTCTTGCGGTTCGCCGAGTCCTTGTACAGGACAAA 57979 Query 145765 CGGTCCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCA-AG-TCCTGCGCACGC 145822 || ||| ||||| | |||| ||| | ||| | || || || | |||||| Sbjct 57978 AGGATTGCCCGTCTCAATTTGCGCCTCGAGGAT--AGCGTACCACAGCTTCTGCGCCTTG 57921 Query 145823 ACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAA 145882 || ||| | ||||||||| ||||| ||| ||| || | |||||| | Sbjct 57920 ACAGAGCGCTTGGCGCGGCCCTCGCGCTCGTACTTCTCGTACAGAGCATCAAACTCCTCG 57861 Query 145883 CCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTG 145942 || ||||| || | ||| || || |||| | ||| |||||||||||||| ||||||| Sbjct 57860 CCATAGCAGTCAGCCAGACCTGGGCACTCGGCGGGGCACATCAGCGACCAGTCGCCGTTC 57801 Query 145943 GCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCT 146002 | ||| || ||| |||| ||| || | ||||||||| | || ||||||||| Sbjct 57800 TGTTCGACACGGCGCATGAACAGATCGGGAATCCACAGCGCCAGGAACAGGTCGCGCGC- 57742 Query 146003 TTGCA-ATCCTCAGCACCCATGTTTC--GCTTCAAATTAAGCACACTATAGATGTCCGCG 146059 ||| ||||| ||||| ||| || || || || | | | | ||||| | Sbjct 57741 GCGCACTTCCTC-CTTGCCATGGTTCTTGC-GCAGATCAATAAATTCAAAAACGTCCGAG 57684 Query 146060 TGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCACG 146116 |||||||| || | |||| || | ||| || || ||||| |||||||||||| Sbjct 57683 TGCCACGGCTCCAGGTAGATCGCAAAGGCGCCCGGGCGCTTGTTGCCGCCCTGGTCCACG 57624 Query 146117 TGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTC 146176 | || || ||||||| | ||||| | ||||||| | | ||| || || |||||| Sbjct 57623 TAGCGCGCCGTGTTGTTGTACACGCGGAGCATGGGCACAATACCGTTGCTCACACCGTTC 57564 Query 146177 GTAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCA----ATGAACATTCACGCCGAGACC 146232 || | || | ||| || |||||| | || | |||| || | ||| Sbjct 57563 GTGCCGGCGATGTACGAGCC-CG---TCGCACGAATGTTGTGGATGTTCAGACCAATACC 57508 Query 146233 GCC-GCCGTACTTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGTCAATGC 146291 ||| ||||| |||| || || ||| |||||| ||||| || || || || Sbjct 57507 GCCGGCCGT-CTTGCTGATCATCGCACAGGTCTTGAGCGTGTCGTATATACCCTCGATCG 57449 Query 146292 TATCG--CTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGC 146349 ||| |||| || | | || |||||||| |||| || | | ||||| || || Sbjct 57448 AGTCGTCCTTC--ATACTCACAAGGAAGCACGACGACATTTGGGGGTTGGGCGTGCCGGC 57391 Query 146350 CGAGAACAACGTCGGGCTCGCGTGCGTAAA-CATTTTTCGGCTCATCATCCGATACGTTT 146408 ||||| ||||| |||||| ||||| || |||| ||| ||||| | Sbjct 57390 ATTGAACAGGGTCGGCGACGCGTGTGTAAAGGCCTTCTCGG-ACATGTAGTTGTACGTCT 57332 Query 146409 CGATAGCGTCTTG-AATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGT 146467 |||| ||| || | | ||| ||||| || ||||| | |||||||||||||||||||| Sbjct 57331 CGATCGCG-CTCGCCACGTCCTCGCCGTGGATGCCGACGGCGACGCGCATGAGCATGTGC 57273 Query 146468 TGGGGCCGCTCCGCCAC 146484 ||||| |||||||| || Sbjct 57272 TGGGGGCGCTCCGCAAC 57256 >seq4 Length=1215465 Score = 129 bits (142), Expect = 6e-25 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 || ||||| | || | ||| |||||| ||||||||||| ||||||| ||||| | Sbjct 412027 CGAAGCACAAGGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCG 411968 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139 ||||| |||||||| || ||| |||| | |||||| |||||||||||||| || || ||| Sbjct 411967 TCCTCGAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTG 411908 Query 131140 TCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACG 131199 || ||| || ||||| | || | || || | ||||||| || | ||||| Sbjct 411907 TCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCCGACGACTCGACCTCAAGGGTAATC 411848 Query 131200 GTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || || || || ||||| || ||||| || |||||| Sbjct 411847 GTCTTGCCAGTCAGAGTCTTGACGAAGATTTGCATG 411812 >seq5 Length=679138 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| |||||||| | || | || |||||| || |||||||| |||||| Sbjct 231773 CCACCACGCAGGCGCAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 231832 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| ||| |||| | ||||| |||||||||||| Sbjct 231833 AGCGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGG 231892 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||| | | ||| | || |||| ||||| | Sbjct 231893 ATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACC 231952 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| ||| | || || ||||| || || || ||||| | |||||| Sbjct 231953 TCGAGGGTGATCGTCTTCCCGGTAAGGGTCTTGACGAACACTTGCATG 232000 Score = 89.7 bits (98), Expect = 5e-13 Identities = 114/156 (73%), Gaps = 1/156 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||||| |||||| || | || | || |||||| || || ||||| || ||| Sbjct 141853 CCACCGCGCAGACGCAGGACAAGGTGCAGCGTGCTCTCCTTCTGGATATTGTAGTCACTC 141794 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| || |||||||| || |||| | |||||||||||||| || Sbjct 141793 AGGGTACGTCCATCCTCCAGTTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGCGGA 141734 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGC 131163 || || || ||||| ||| ||| ||||| |||| Sbjct 141733 ATGCCCTCCTTGTCCTGGATCTTCGTCTTGA-CTGC 141699 >seq1 Length=1515123 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||||||||| | || | || |||||| ||||||||||| ||||| Sbjct 1006409 CCACCACGGAGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTA 1006350 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| || |||| | |||||| ||||||||||| Sbjct 1006349 AGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGTTGGTCCGGAGGA 1006290 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||||| | || | || || | ||||||| Sbjct 1006289 ATACCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACC 1006230 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | || || ||||| ||||| || || || || ||||| Sbjct 1006229 TCGAGGGTGATCGTCTTGCCGGTGAGAGTCTTGACAAAGATTTGCAT 1006183 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||||||||| || || | || |||||| ||||||||||| ||||| Sbjct 1006638 GCCACCACGGAGACGCAGCACCAAGTGCAACGTGCTCTCCTTCTGAATGTTGTAGTCGCT 1006579 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||||| ||||| ||||||||||| || | || |||||||| ||||||||||| Sbjct 1006578 GAGCGTGCGACCATCCTCCAGCTGCTTGCCAGCAAAAATCAAACGCTGTTGGTCCGGAGG 1006519 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| ||| || ||||| | || | || || | || |||| Sbjct 1006518 AATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATCGTGTCCGACGATTCGAC 1006459 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || || || || || || || || || ||||| Sbjct 1006458 CTCGAGAGTGATCGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1006411 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||||||||| | || | || |||||| ||||||||||| ||||| Sbjct 1006181 CCACCACGGAGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTA 1006122 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||||||||| || | || |||||||| || |||||||| Sbjct 1006121 AGCGTGCGCCCATCCTCCAGCTGCTTGCCGGCAAAAATCAAACGCTGTTGATCCGGAGGA 1006062 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || |||| | || | || || | || |||| Sbjct 1006061 ATGCCCTCCTTGTCCTGGATCTTGGCTTTGACGTTGTCAATCGTGTCCGACGATTCGACT 1006002 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || ||||| ||||| || || || || ||||| Sbjct 1006001 TCGAGAGTGATCGTCTTGCCGGTGAGAGTCTTGACAAAGATTTGCAT 1005955 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||||||||| | || | || |||||| ||||||||||| ||||| Sbjct 1005953 CCACCACGGAGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTA 1005894 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||||||||| || | || | |||||| || |||||||| Sbjct 1005893 AGCGTGCGCCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGATCCGGAGGA 1005834 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||||| | || | || || | || |||| Sbjct 1005833 ATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCAATCGTGTCCGACGATTCGACC 1005774 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || || || || || || || || || ||||| Sbjct 1005773 TCGAGAGTGATCGTCTTGCCAGTGAGGGTCTTAACAAAGATTTGCAT 1005727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012752798720