Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01-
09] 8 sequences; 7,757,162 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq1 118 9e-22
seq5 113 4e-20
seq4 93.3 4e-14
>seq1
Length=1515123
Score = 118 bits (130), Expect = 9e-22
Identities = 157/216 (73%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| |||||| | ||||| || | ||||| ||||||| || |||||
Sbjct 1005955 ATGCAAATCTTTGTCAAGACTCTCACCGGCAAGACGATCACTCTCGAAGTCGAATCGTCG 1006014
Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
||||| || || |||| |||| || | || ||||| || || ||||| || ||
Sbjct 1006015 GACACGATTGACAACGTCA---AAGCCAAGATCCAG-GACAAGGAGGGCATTCCTCCGGA 1006070
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
|||||||| | |||||||||||||| || | || |||| ||||| | |||| ||
Sbjct 1006071 TCAACAGCGTTTGATTTTTGCCGGCAAGCAGCTGGAGGATGGGCGCACGCTTAGCGACTA 1006130
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
||| ||||| || || |||||| || | |||||
Sbjct 1006131 CAACATTCAGAAGGAGAGCACGCTGCACCTGGTGCT 1006166
Score = 118 bits (130), Expect = 9e-22
Identities = 157/215 (73%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| |||||| | ||||| || | ||||| |||| || ||||||||
Sbjct 1006183 ATGCAAATCTTTGTCAAGACTCTCACCGGCAAGACGATCACCCTCGAGGTCGAGTCGTCG 1006242
Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
||||| || || || || | || || | ||| ||||| || || ||||| || |||
Sbjct 1006243 GACACGATTGA--CAATGTCAAGGCCAAGATTCAG-GACAAGGAGGGTATTCCTCCGGAC 1006299
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
|||||||| | || ||||||||||| || | || |||| ||||| | |||| |||
Sbjct 1006300 CAACAGCGTCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTTAGCGACTAC 1006359
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| ||||| || || |||||| || | |||||
Sbjct 1006360 AACATTCAGAAGGAGAGCACGCTGCACCTGGTGCT 1006394
Score = 109 bits (120), Expect = 5e-19
Identities = 157/219 (72%), Gaps = 8/219 (4%)
Strand=Plus/Plus
Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055
||||||||||| ||||| ||||| | || || || | ||||| |||| || || |||
Sbjct 1005724 ACAATGCAAATCTTTGTTAAGACCCTCACTGGCAAGACGATCACTCTCGAGGTCGAATCG 1005783
Query 25056 TCTGACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACC 25111
|| ||||| || || |||| | || || | ||| ||||| || || ||||| ||
Sbjct 1005784 TCGGACACGATTGACAACGTCA---AGGCCAAGATTCAG-GACAAGGAGGGTATTCCTCC 1005839
Query 25112 TGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGA 25171
|| |||||||| | |||||||||||||| || | || |||| ||||| | ||||
Sbjct 1005840 GGATCAACAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGGCGCACGCTTAGCGA 1005899
Query 25172 TTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
||||| ||||| || || |||||| || | |||||
Sbjct 1005900 CTACAACATTCAGAAGGAGAGCACGCTGCACCTGGTGCT 1005938
Score = 107 bits (118), Expect = 2e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| ||||| | || || || | ||||| |||| || || |||||
Sbjct 1006411 ATGCAAATCTTTGTCAAGACCCTCACTGGCAAGACGATCACTCTCGAGGTCGAATCGTCG 1006470
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| || || | ||| || ||| ||||| || || ||||| || ||||||
Sbjct 1006471 GACACGATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 1006530
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||||| | |||||||| ||||| || | || |||| |||||| | |||| |||||
Sbjct 1006531 CAGCGTTTGATTTTTGCTGGCAAGCAGCTGGAGGATGGTCGCACGCTCAGCGACTACAAC 1006590
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
||||| || || |||| | || || |||||
Sbjct 1006591 ATTCAGAAGGAGAGCACGTTGCACTTGGTGCT 1006622
>seq5
Length=679138
Score = 113 bits (124), Expect = 4e-20
Identities = 154/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055
|| |||||| | || || ||||| | ||||| || | ||||| |||| ||||||||
Sbjct 232002 ACCATGCAAGTGTTCGTCAAGACCCTTACCGGGAAGACGATCACCCTCGAGGTGGAGTCT 231943
Query 25056 TCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
|| ||||| |||||| ||||| || ||| ||||| || || || || || |||
Sbjct 231942 TCCGACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGAC 231883
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
|||||||| | || || |||||||| || | || |||| |||||| || |||| |||
Sbjct 231882 CAACAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACGCTGAGCGACTAC 231823
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| || || || || |||||| || | |||||
Sbjct 231822 AACATCCAGAAGGAGAGCACGCTCCACCTTGTGCT 231788
>seq4
Length=1215465
Score = 93.3 bits (102), Expect = 4e-14
Identities = 150/214 (70%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || |||||| |||| || || | || || | || || ||||||||
Sbjct 411813 ATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATTACCCTTGAGGTCGAGTCGTCG 411872
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||||| ||||| || || ||| || ||| ||||| || || || || || ||||
Sbjct 411873 GACACGATCGA--CAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACC 411930
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
||||||| | || || || || || || | || || | |||||| || |||| ||||
Sbjct 411931 AACAGCGTCTGATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTGAGCGACTACA 411990
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
| ||||| || || ||| || || | |||||
Sbjct 411991 ACATTCAGAAGGAGAGCACCCTGCACCTTGTGCT 412024
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327957750520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |