Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01- 09] 8 sequences; 7,757,162 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq1 129 5e-25 seq5 87.8 2e-12 seq4 84.2 2e-11 >seq1 Length=1515123 Score = 129 bits (142), Expect = 5e-25 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| |||||||| || | || || || ||| ||||||| || || ||| | | Sbjct 1005727 ATGCAAATCTTTGTTAAGACCCTCACTGGCAAGACGATCACTCTCGAGGTCGAATCGTCG 1005786 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | |||| || ||||| ||||||||||||||||| || |||||| Sbjct 1005787 GACACGATTGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGTATTCCTCCGGATCAA 1005846 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||||||||| ||| | |||||| ||||| | ||| |||||| Sbjct 1005847 CAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGGCGCACGCTTAGCGACTACAAC 1005906 Query 22399 ATTCAAAAAGA 22409 ||||| || || Sbjct 1005907 ATTCAGAAGGA 1005917 Score = 129 bits (142), Expect = 5e-25 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || ||| | ||||| || ||| ||||||| ||||| ||| | | Sbjct 1005955 ATGCAAATCTTTGTCAAGACTCTCACCGGCAAGACGATCACTCTCGAAGTCGAATCGTCG 1006014 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | ||||| || || || ||||||||||| ||||| || |||||| Sbjct 1006015 GACACGATTGACAACGTCAAAGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGATCAA 1006074 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||| | || ||||||||||| ||| | |||||| ||||| | ||| |||||| Sbjct 1006075 CAGCGTTTGATTTTTGCCGGCAAGCAGCTGGAGGATGGGCGCACGCTTAGCGACTACAAC 1006134 Query 22399 ATTCAAAAAGA 22409 ||||| || || Sbjct 1006135 ATTCAGAAGGA 1006145 Score = 129 bits (142), Expect = 5e-25 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || ||| | ||||| || ||| |||| || || || || | | Sbjct 1006183 ATGCAAATCTTTGTCAAGACTCTCACCGGCAAGACGATCACCCTCGAGGTCGAGTCGTCG 1006242 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || |||| || ||||| ||||||||||||||||| || || ||| Sbjct 1006243 GACACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGTATTCCTCCGGACCAA 1006302 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||||||||| ||| | |||||| |||||| | ||| |||||| Sbjct 1006303 CAGCGTCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTTAGCGACTACAAC 1006362 Query 22399 ATTCAAAAAGA 22409 ||||| || || Sbjct 1006363 ATTCAGAAGGA 1006373 Score = 105 bits (116), Expect = 6e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || || | || || || ||| ||||||| || || ||| | | Sbjct 1006411 ATGCAAATCTTTGTCAAGACCCTCACTGGCAAGACGATCACTCTCGAGGTCGAATCGTCG 1006470 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | |||| || || || ||||||||||| ||||| || || ||| Sbjct 1006471 GACACGATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 1006530 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||| | || ||||| ||||| ||| | |||||| ||||| || ||| |||||| Sbjct 1006531 CAGCGTTTGATTTTTGCTGGCAAGCAGCTGGAGGATGGTCGCACGCTCAGCGACTACAAC 1006590 Query 22399 ATTCAAAAAGA 22409 ||||| || || Sbjct 1006591 ATTCAGAAGGA 1006601 >seq5 Length=679138 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||| | || || || || | ||||| || ||| |||| || || ||||| | || Sbjct 231999 ATGCAAGTGTTCGTCAAGACCCTTACCGGGAAGACGATCACCCTCGAGGTGGAGTCTTCC 231940 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | || || || || |||||||||||||| || || || ||| Sbjct 231939 GACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAA 231880 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || |||||||| ||| | |||||| ||||| | ||| |||||| Sbjct 231879 CAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACGCTGAGCGACTACAAC 231820 Query 22399 ATTCAAAAAGA 22409 || || || || Sbjct 231819 ATCCAGAAGGA 231809 >seq4 Length=1215465 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || ||| | || || || ||| | || ||||| || || | | Sbjct 411813 ATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATTACCCTTGAGGTCGAGTCGTCG 411872 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || |||| || || || ||||||||||| || || || || ||| Sbjct 411873 GACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAA 411932 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || || ||| | ||||| ||||| | ||| |||||| Sbjct 411933 CAGCGTCTGATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTGAGCGACTACAAC 411992 Query 22399 ATTCAAAAAGA 22409 ||||| || || Sbjct 411993 ATTCAGAAGGA 412003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727959076520