Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01- 09] 8 sequences; 7,757,162 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq8 154 3e-32 seq3 116 8e-21 >seq8 Length=447081 Score = 154 bits (170), Expect = 3e-32 Identities = 395/592 (67%), Gaps = 11/592 (2%) Strand=Plus/Plus Query 251554 ACACGGCGTTCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAG 251613 || ||||| ||||| || || |||||||||| || ||||| |||||| ||||||||| Sbjct 44995 ACGCGGCGCTCGAAAAAGTTCGACTTGCCCTGGAGCGAGATGTTCTCCATAAAGTCGAAG 45054 Query 251614 GGGTTTGTGGCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACA 251673 ||||| || | ||||| ||||| || | ||| || |||| | ||||| |||||| Sbjct 45055 GGGTTCGTCGAGTTGTAGTGCTTCGGGTTGCCGAGGTTGACGAGCAGACGGTCCGCCACA 45114 Query 251674 AACTCCAGATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACA-AGGAATTGC 251732 ||||| | ||||| | ||| || | ||||||||| |||| ||| | ||| | || Sbjct 45115 AACTCGATGTACTGGCACATGAGGCGCGCGTTCATGCCGATCA-GCGAAACAGGCAAGGC 45173 Query 251733 CTCACAGATGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGC 251792 || | || |||| || |||| || ||||| | || |||||| ||| Sbjct 45174 GTCGGTCAAAAAGTCCTGCTCAATGGCCACAGCCTCGGTGATGATGCGGTTCACC-GTGT 45232 Query 251793 CAGAGACAGCTTG-TTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGAC 251851 ||| | || | |||| ||| | | ||||||| | |||| | |||||| | Sbjct 45233 CAGGGTGCGCACGCTTCTTCAGGTGGCTGAACAGGAGACAGGCAAAGTCGGTGTGCAGGC 45292 Query 251852 CCTCGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCC 251911 |||||||||| ||||| |||||| || | ||| |||||||| | || || ||| Sbjct 45293 CCTCGTCGCGCGAGATGAGCTCGTTCGAGAACGACAGACCAGGCATGAGGCCGCGCTTCT 45352 Query 251912 TGAGCCAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATG 251971 ||||||||||||| | | ||| || || ||||| | | |||||||| | | | Sbjct 45353 TGAGCCAGAAGATGGAGGCAAACGAGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGG 45412 Query 251972 CAACAAGGCGCTCAGCAAACGACTTG-TCCTG--CGACAAGAACTTCTGTGCCCATGCTG 252028 | ||||||||||| | ||||| | |||| ||| | | | | ||||| | | Sbjct 45413 CCACAAGGCGCTCCGAGAACGAGGCGCGCCTGTCCGAGATCCAGCGCAGGGCCCACTCGG 45472 Query 252029 CCTTCTTTCCAACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTCCGCTCGGCAT 252088 |||||| || |||| || || ||||| || | ||||| | | |||| || Sbjct 45473 CCTTCTGCTTGACGACGGGAATCGTCTCGATAGCGTTGAAGAGGAACTCACGCT--GCTC 45530 Query 252089 CG--TCCTCGATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATG 252138 || || |||| || || | ||||| |||||| ||||||| |||||| Sbjct 45531 CGGCTCGCGGATGTACGTGTCGATGAGGAGCGAGTACGTCTCCGAGTGGATG 45582 >seq3 Length=1365147 Score = 116 bits (128), Expect = 8e-21 Identities = 397/613 (65%), Gaps = 18/613 (3%) Strand=Plus/Minus Query 218402 GCGAGCTCATCGACCGATCTTTCAACAAGTCTCGTCCTGATGAGCGCAAGACCTGGCTGC 218461 |||| ||| |||||| | ||||||||| | || || |||||| ||||||| Sbjct 277218 GCGATCTCGTCGACCTGGCCTTCAACAAGAAGAAGGCGGACGACCGCAAGGAGTGGCTGC 277159 Query 218462 TCGACTTCCAGCCCGGAAACCAGTTGGACCAGTCGAAGAC-CAACATCCCCGTCCCTGAC 218520 | | ||| ||| || | | | ||||||| || | | | | |||||| || | ||| Sbjct 277158 GCCAGTTCGTGCCGGGCACCTACCTGGACCAC-CGCATCCGCCAGATCCCCATCTCGGAC 277100 Query 218521 TTCATCGACAAGGAGCTCATTCTTTTCTC----GCGGTATGATGTGGAGCGTTCTATTCC 218576 || ||| |||||||||| || || ||||| |||| | || | || || || || Sbjct 277099 TTTATCAACAAGGAGCTGATCCTCTTCTCCATGGCGG-ACAATATC---CGCTCGATCCC 277044 Query 218577 CAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAAGCG 218636 |||||||| || ||||||||||| ||||| ||| |||| || | |||||||| Sbjct 277043 GAGCGTGGTCGACGGCCTCAAGCCGGGCCAGCGCAAGGTCCTGTTCGGTTGCTTCAAGCG 276984 Query 218637 GAACCTGGTTCAA----GAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTT 218692 |||| |||| ||||| ||||| ||| | ||||| || || || Sbjct 276983 TAACC----TCAAGACGGAAATCAAGGTGCAGCAGCTGCAGGGTTACGTGTCGGAGCACA 276928 Query 218693 CTGGCTACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACT 218752 | | || || ||||| || ||||||||| | ||||| ||| | || ||||||| Sbjct 276927 CGGCGTATCACCACGGCGACCAGAGTCTGGTAATGACGATTGTGGGCCTTGCGCAGGACT 276868 Query 218753 ATGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGTCTAT 218812 | ||||| |||||| |||| |||| | |||||||| || || || | || Sbjct 276867 TTTGCGGCAGCAACAACGTGAATATGCTCATGCCCAACGGCCAATTCGGCACGCGCAGCA 276808 Query 218813 TGGGTGGAAAGGATAGTGCTTCTGCCAGGTATATCTTTACAAAGTTGTCGCCCGTGACGC 218872 |||| || ||||| || ||| | || || || || || ||| | | |||| Sbjct 276807 TGGGCGGCAAGGACGCGGCGAGCGCCCGTTACATTTTCACGGCCGTGCCGCGCATCACGC 276748 Query 218873 GCCAGGTGTTCAATCAGGCCGATGATGTGCTCCTTAAGTATCTTGAGGACGATGGTTCTT 218932 ||||| | ||| | | | || || | ||||| || || || || || || || Sbjct 276747 GCCAGCTCTTCCACCCGAAGGACGACGCACTCCTCAACTACCTCGACGAGGACGGGCAGA 276688 Query 218933 CGATTGAGCCCGAGTGGTATGTGCCTGCTATTCCGTTTTTGCTCGTAAATGGTGCCAATG 218992 || |||||||||||||| || || | | ||| |||| | || || ||| | | Sbjct 276687 GCATCGAGCCCGAGTGGTACGTCCCGGTCGTGCCGCAGGTGCTGCTCAACGGCGCCGACG 276628 Query 218993 GTATCGGGACAGG 219005 ||||||| || || Sbjct 276627 GTATCGGCACGGG 276615 Score = 105 bits (116), Expect = 1e-17 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 || ||||| |||||| ||||| | |||||||| || || |||| ||||||||||| ||| Sbjct 397474 GGCGAGGACCTGTGTAACTGTCAGTTCTCGCTGGCCTACGGTGCCAAGATTCTGCTGAAC 397415 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 | || ||| | ||||||||||| |||| || |||||| |||| || || | Sbjct 397414 ACCGCCACCCTGCGCCTCAAGCGTGGCCACCGCTACGGTCTCTGTGGTCGTAACGGTTCC 397355 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 |||||| || || ||||||||||| ||||| ||| | | ||| |||| ||| Sbjct 397354 GGTAAGTCGACCCTGATGCGCGCCATCCAGAACGGCCAGGTCG-AGGGCTTCCCGTCGCC 397296 Query 279525 T-CTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGAC 279563 | ||||| | || ||| || ||||||||| ||||| Sbjct 397295 TGAGGAGGTCCGCACCTGGTACGTCGAGCACGACCTCGAC 397256 Score = 96.9 bits (106), Expect = 7e-15 Identities = 138/194 (71%), Gaps = 3/194 (2%) Strand=Plus/Minus Query 279705 CTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCCGAT 279764 |||||||||||||||||||||||||| ||||| | || ||| | || | ||||| Sbjct 397120 CTGTCGGGTGGTTGGAAGATGAAGCTCGCCCTGGCCCGTGCCGTGCTGTTCAAGGCCGAC 397061 Query 279765 GTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTAGTG 279824 | || ||||| |||||||| ||||||||| ||||| | |||||| |||||| | | Sbjct 397060 ATTCTGCTGCTCGATGAGCCGACCAACCACTTGGACGTGATCAACGTGGCCTGGATCACG 397001 Query 279825 TCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCTGGCTTC 279884 |||||| || | | ||| | | || ||||||| || |||||||| ||| Sbjct 397000 AACTACCTGTGCACT---ACGAACGCCACCTCGATCATTGTGTCGCACGACTCCAAGTTC 396944 Query 279885 CTAGATGCCGTGTG 279898 || | | |||||| Sbjct 396943 CTGAACGACGTGTG 396930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836694646728