Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01- 09] 8 sequences; 7,757,162 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq8 237 3e-57 seq1 147 4e-30 seq5 143 5e-29 seq3 132 9e-26 seq4 116 7e-21 >seq8 Length=447081 Score = 237 bits (262), Expect = 3e-57 Identities = 597/892 (67%), Gaps = 29/892 (3%) Strand=Plus/Plus Query 9938 GACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGAG 9997 |||||| ||||| || || | || ||||||||||| ||||| |||||||||| ||| Sbjct 44970 GACGCCGGCCTTGGCATAGTCGGCAACGCGGCGCTCGAAAAAGTTCGACTTGCCCTGGAG 45029 Query 9998 GGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACCGAG 10057 || ||| |||||| ||||| ||||||||| | | | ||||| |||| ||||| Sbjct 45030 CGAGATGTTCTCCATAAAGTCGAAGGGGTTCGTCGAGTTGTAGTGCTTCGGGTTGCCGAG 45089 Query 10058 TGCTGT-GAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTTCA 10116 | || || | ||||| ||||| |||||||||||||||| ||| ||| || ||||| Sbjct 45090 -GTTGACGAGCAGACGGTCCGCCACAAACTCGATGTACTGGCACATGAGGCGCGCGTTCA 45148 Query 10117 TGCCAATCATGCGGCAGGGG-ATGGCGTCG--CAAATGAAGTCCTTTTCGTTGGCGACCG 10173 |||| |||| ||| | || | ||||||| |||| ||||||| || |||| || | Sbjct 45149 TGCCGATCA-GCGAAACAGGCAAGGCGTCGGTCAAA--AAGTCCTGCTCAATGGCCACAG 45205 Query 10174 CTTCCTCGACGATGCTCTTTACCACGTCAAGGGACA---GCTTGTTCTCGAGCTTCGAAT 10230 | || || ||||| || ||| |||| || | |||| ||| | | | ||| Sbjct 45206 CCTCGGTGATGATGCGGTTCACCGTGTCAGGGTGCGCACGCTTCTTCAGGTGGCT-GAA- 45263 Query 10231 ACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACA 10290 |||||| |||| | ||| |||||||||||||| ||||| |||||| || | Sbjct 45264 -CAGGAGACAGGCAAAGTCGGTGTGCAGGCCCTCGTCGCGCGAGATGAGCTCGTTCGAGA 45322 Query 10291 AACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGG 10350 | |||||| |||||||| || || || |||||||| |||| | ||||| || | Sbjct 45323 ACGACAGACCAGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGGCAAACGAGCCCG 45382 Query 10351 AGAACAGAAGACCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGGAG---CGGT 10407 |||| | | ||||| ||| | |||| || |||||||| | ||| ||| || Sbjct 45383 AGAAAAAGATGCCCTCGACGGCGGCAAAGGCCACAAGGCGCTCCGAGAACGAGGCGCGCC 45442 Query 10408 CGCGCGAAAAGTATTTCGAGGCCCACGCTGCCTTCTTTCCCACGGCAGGGATCGTCTCGA 10467 | ||| | | | ||||||| | ||||||| ||| | || |||||||||| Sbjct 45443 TGTCCGAGATCCAGCGCAGGGCCCACTCGGCCTTCTGCTTGACGACGGGAATCGTCTCGA 45502 Query 10468 TAGCCTCGAAGAGCTTGTTAC---GCTCGGTCTCGTCCTCAATAAGAGCATCAAGGAGCA 10524 |||| | |||||| | || |||| | |||| | || | | || | ||| | Sbjct 45503 TAGCGTTGAAGAGGAACTCACGCTGCTCCGGCTCG-CGGATGTACGTG--TCGATGAGGA 45559 Query 10525 GGGAGTATTGCTCGCTGTGGACGCTCTCATTGTACCCCTGGTAAGCGTAGAACATACGTG 10584 | ||||| ||| ||||| | |||| | |||| | ||||||| || | Sbjct 45560 GCGAGTACGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGG 45619 Query 10585 CCGAGGGGTCCGTGACTTCCTCGGCAAAGTTGTTGTTCAGGTTCTCCATCACCATGCCAT 10644 || || | || || || || ||| | | ||||||||| | || || || | Sbjct 45620 CCTCGGCGGCCTGCACCTCGGCGCTGAAGCGCTCGACCAGGTTCTCGTTGACGATACCGT 45679 Query 10645 CGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAGTGGCGCTCATCATCGTTCA--- 10701 | | ||||||||| | |||| ||| | | ||||||||||||| ||||||| Sbjct 45680 CCGAAGCAGCAAAGAAGGCCAGGACGTGGCTCACAAAGTGGCGCTCATTGTCGTTCATGC 45739 Query 10702 GTTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACCTCCTCCACGGTCCAGAAAG 10761 | | || |||||| || |||| ||| | | |||||| |||||||||| | Sbjct 45740 GGTGGTC---CCAGTCGTGCAGGTCCTTCGAGAGGTCCATCTCCTCGGCGGTCCAGAACG 45796 Query 10762 TGGCAACGGCCTTCTTGTACATCTGGAAAATGTCGGGGTACCGGATGGGGAA 10813 ||| ||||||||||||||||||| | || ||| |||| ||||| ||||| Sbjct 45797 AGGCCTCGGCCTTCTTGTACATCTGCCAGATCTCGTGGTAGCGGATCGGGAA 45848 >seq1 Length=1515123 Score = 147 bits (162), Expect = 4e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| |||| ||| |||||| ||| || || ||||| || ||| Sbjct 1005953 CCACCACGGAGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTA 1005894 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||| || | |||||| ||||| || || || | ||||| || || ||| Sbjct 1005893 AGCGTGCGCCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGATCCGGAGGA 1005834 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| |||||||| ||||||||| || || ||||| | ||||| || Sbjct 1005833 ATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCAATCGTGTCCGACGATTCGACC 1005774 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 || | ||||| || || || ||||||||||| || || || |||||| || Sbjct 1005773 TCGAGAGTGATCGTCTTGCCAGTGAGGGTCTTAACAAAGATTTGCATTGTG 1005723 Score = 145 bits (160), Expect = 1e-29 Identities = 173/235 (74%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 68227 TTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTAT 68286 |||| | || || || || |||| |||||||| | |||| ||| || || ||||| | Sbjct 1006645 TTTACTGGCCACCACGGAGACGCAGCACCAAGTGCAACGTGCTCTCCTTCTGAATGTTGT 1006586 Query 68287 AATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGT 68346 | ||| ||| || | ||||| || | |||||| || || || || | | ||||||| Sbjct 1006585 AGTCGCTGAGCGTGCGACCATCCTCCAGCTGCTTGCCAGCAAAAATCAAACGCTGTTGGT 1006526 Query 68347 CGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG 68406 | || |||||||| |||||||| || ||||| ||||||||| || || ||||| | | Sbjct 1006525 CCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATCGTGTCCGACG 1006466 Query 68407 ATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| || || | ||||| || || || |||||||||||||| || || ||||| Sbjct 1006465 ATTCGACCTCGAGAGTGATCGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1006411 >seq5 Length=679138 Score = 143 bits (158), Expect = 5e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||||| || | ||| |||||| ||| || |||||||| || ||| Sbjct 231773 CCACCACGCAGGCGCAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 231832 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| |||||||| || || | |||||||| || || Sbjct 231833 AGCGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGG 231892 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||| ||||| || |||||| ||||| | || || || Sbjct 231893 ATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACC 231952 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||| || || || || |||||||||||||| | ||||| Sbjct 231953 TCGAGGGTGATCGTCTTCCCGGTAAGGGTCTTGACGAACACTTGCAT 231999 >seq3 Length=1365147 Score = 132 bits (146), Expect = 9e-26 Identities = 678/1067 (64%), Gaps = 58/1067 (5%) Strand=Plus/Plus Query 224956 CTCCAGGTCCTGGCCTGAGGCATACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAG 225015 ||||||||||| || | || ||||| | ||||||| || ||| ||||||| Sbjct 396446 CTCCAGGTCCTCACCGGTCTGGTAACGCCAGAGCATGTACTCCAGCGGCGTCTTGTCCAG 396505 Query 225016 GTGGTTCTCAATATGGTGGAAAGCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATG 225075 ||| | ||||| |||||||| || |||||||| ||||| | ||| || ||| || || Sbjct 396506 GTGCTGGTCAATGTGGTGGAACGCGTGCTGGGCAACGTAACCAATGACCAGGTTAGGGTG 396565 Query 225076 CTTCCACACAGAGC-CCCGAGTCGGT-TGTGCCTCGCCGGTGAGGACCTTGATGAGCGTA 225133 |||||||| | | ||||||| || | | || ||| | | ||| | ||||| Sbjct 396566 CTTCCACA--GCTCACCCGAGTTGGGCTCCGTGTCACCGACCACCAGCTTCACCAGCGTC 396623 Query 225134 GTCTTGCCCGCACCATTGGGGCCAATCACGCCAATCCGGGATGACATTGCAACCTGC--- 225190 | ||| |||| ||| ||||| || | ||| | | || || |||| | | |||| Sbjct 396624 GACTTACCCGAACCGTTGGGACCCAGCACAGCCACACGCGACGACAGCGACAGCTGCATC 396683 Query 225191 GAGTT--CACG---TTGCTGAAGATCTCAGG---GCCAGTTTGGTAAGCAAAGGCCACGC 225242 ||| | |||| |||| | | | || ||| | |||| ||| ||||| Sbjct 396684 GAGATACCACGCAATTGCGG-----CGCCGGCGTGCCGG---GGTACTGGAAGACCACGT 396735 Query 225243 CACGCAGCTTCATGATGGCACGGTCCTTGGAAGTAATACCCTCCAGGAACCCGGGCTCGG 225302 |||||| ||||| || | ||||||| | | ||| ||||| | | ||| | || Sbjct 396736 CACGCATCTTCACGAGCGACTTCTCCTTGGTCTTGACACCGTCCAGCAGCGGGGGGTTGG 396795 Query 225303 GGAACTCCCACTTGGTCACCGCGTCC---TTCAGGTCGTAGTAAGATGCAGCCTCGGGT- 225358 | | || || | || || || ||||| ||| || | |||||| || Sbjct 396796 GCAGCTTGAACGAGTAGTCCTCGCCCGAGTTCAGCTCGACATAGGCACGAGCCTCCGGCA 396855 Query 225359 --CGCTTTGCCACGAAAGCAGACAGGTTTCCGAGGTGCTTCGTGAGCTTGAGGTTCTTCT 225416 ||||| ||| || || |||||| ||| ||| | ||| ||||| | ||| Sbjct 396856 CACGCTT---CACAAAGGCGTCCAGGTTGCCGGGGTAACGCTTGATCTTGAAGCGGTTCA 396912 Query 225417 CGTAATGAACAATTGCCGAGCACACTGCGTCAAGGAAGCCAGAGTCGTGGGACACAATGA 225476 || | | ||| | | ||||| ||| ||||| |||||||| |||||||||| Sbjct 396913 GGT---GCAGAATGTCGGTACACACGTCGTTCAGGAACTTGGAGTCGTGCGACACAATGA 396969 Query 225477 TGGACGACACGTTCGTCAGGCCCTTGAGGTGCGTGATGAGCCATGCCACGTTGCTGACGT 225536 | || | ||||||| || | | || |||||| ||| ||||||||| | |||| Sbjct 396970 TCGAGGTGGCGTTCGTAGTGCACAGGTAGTTCGTGAT---CCAGGCCACGTTGATCACGT 397026 Query 225537 CCATGTGGTTTGTAGGTTCGTCCAGAAGCAGGATGTCAGCATCAATGAGGATGGCGCGCG 225596 ||| |||||| || || || || || ||||| ||||| || | | || | ||| || | Sbjct 397027 CCAAGTGGTTGGTCGGCTCATCGAGCAGCAGAATGTCGGCCTTGAACAGCACGGCACGGG 397086 Query 225597 TGAGAGACAGCTTCATTTTCCAGCCCCCGGACAGGGAGCCGATTGAAACAGAGTG-CTTA 225655 || | |||||||| ||||| || || ||||||| ||| | | | | || | Sbjct 397087 CCAGGGCGAGCTTCATCTTCCAACCACCCGACAGGGCCGTGATAGGACCGGCCTGACGCT 397146 Query 225656 GCTTCGTCAAAGCCGTACTCCAGGAGCGTCTGGATAATGCGCTCGGGAGAGCTGCGAGCG 225715 || ||||| ||||| ||| ||||||| | ||| || ||| | Sbjct 397147 GC-TCGTCGAAGCCCATCTCAGCCAGCGTCTTG---------GCGGCCGACTCGCG---G 397193 Query 225716 GCAACGTT--GG----GGTCGGACGAGAGGTAATCATATACGGTCATGTCCGAGACAGAC 225769 | ||||| || ||| | || | | || | | ||||| | || Sbjct 397194 TCGACGTTCAGGCGCTTGTCCTGCAGGATGAACTCCAGAATCGAAATGTCACCCTCCGAG 397253 Query 225770 GCGTCAATGTCGTGGTCCACGTACACCGTCCGGAGCTGAGAAGCATCGGGGAAGCCCTCC 225829 |||| | |||||| || |||||| || |||| || || ||||||||||| Sbjct 397254 CCGTCGAGGTCGTGCTCGACGTACCAGGTGCGGACCTCCTCAGGCGACGGGAAGCCCTCG 397313 Query 225830 AGCTGGCCATTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGCCGTTGGGACCGATG 225889 | |||||| || || || || | |||||| ||| || | ||||| |||| | Sbjct 397314 ACCTGGCCGTTCTGGATGGCGCGCATCAGGGTCGACTTACCGGAACCGTTACGACCACAG 397373 Query 225890 AGGCCGTAATGATTCCCGCGCTTGATGTTGAGGCGCGTGGAGTTCAGGAGGATCTTGCCA 225949 || ||||| | | || ||||||| | ||| | || |||||| || |||||| || Sbjct 397374 AGACCGTAGCGGTGGCCACGCTTGAGGCGCAGGGTGGCGGTGTTCAGCAGAATCTTGGCA 397433 Query 225950 CCATAGGCAAGGGAGAACTCGCAATCGCACAGGTCCTCACCCTCCTC 225996 || ||||| || ||||||| || | ||||||||||| |||||||| Sbjct 397434 CCGTAGGCCAGCGAGAACTGACAGTTACACAGGTCCTCGCCCTCCTC 397480 Score = 87.8 bits (96), Expect = 3e-12 Identities = 110/151 (73%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 224507 AGCGACTCGCGGTCAAGGAAGTTCGTCGGCTCATCCAGGATGATAACGTGGGGGCACTGC 224566 |||||||| ||||| | ||||||||||||||| ||||| | ||| | |||||| || Sbjct 395982 AGCGACTCACGGTCCAAGAAGTTCGTCGGCTCGTCCAGCACGATGATGTGGGGCATACGC 396041 Query 224567 CACAGGGCTGCACCAACCACCAGCTTCACCTTCTGACCGCCAGAGAGGCCGCGGATCCGC 224626 ||| || ||||| | ||| | ||| ||||||||||| || || || || || ||| Sbjct 396042 CACGTCGCAGCACCGAGCACGACCTTGACCTTCTGACCACCCGAAAGACCACGCATCGTG 396101 Query 224627 GAGTGAGTCGTGAATTCGGGGTCAAGACCAA 224657 ||| | ||||| || | || ||||||| Sbjct 396102 TTGTGCGAGGTGAACTCACGCTCGAGACCAA 396132 >seq4 Length=1215465 Score = 116 bits (128), Expect = 7e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 68258 GTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTG 68317 ||| || ||| ||| || || ||||| || ||| || || | || || || | ||| Sbjct 412016 GTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCGTCCTCGAGCTG 411957 Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377 ||| || ||||| || || | |||||||| || || ||||| |||||||| || ||||| Sbjct 411956 CTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTT 411897 Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGT 68437 |||||||| ||||| ||||| | || || || || | ||| || || || || || Sbjct 411896 GGCCTTGACATTGTCGATCGTGTCCGACGACTCGACCTCAAGGGTAATCGTCTTGCCAGT 411837 Query 68438 GAGGGTCTTGACGAATATCTGCAT 68461 || ||||||||||| || ||||| Sbjct 411836 CAGAGTCTTGACGAAGATTTGCAT 411813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921622307837760