Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01- 09] 8 sequences; 7,757,162 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq4 125 6e-24 seq1 118 9e-22 seq5 91.5 1e-13 >seq4 Length=1215465 Score = 125 bits (138), Expect = 6e-24 Identities = 144/194 (74%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251 || || ||||||||||| ||||||| || ||| || || || || ||||||||| || Sbjct 412003 TCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAG 411944 Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311 || |||||||||||||||||||| ||||| || ||||| ||||| || | | Sbjct 411943 ATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTG 411884 Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371 || | ||||| | || ||||| || | ||| | ||| ||||| |||||||| || || Sbjct 411883 TCGATCGTGTCCGACGACTCGACCTCAAGGGTAATCGTCTTGCCAGTCAGAGTCTTGACG 411824 Query 114372 AAAATCTGCATGGC 114385 || || |||||||| Sbjct 411823 AAGATTTGCATGGC 411810 >seq1 Length=1515123 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | || || | || | ||| || || ||||||||||| ||| Sbjct 1006412 ATACCACCACGGAGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCG 1006353 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || | || || ||| || || || || || || |||| |||||||||||||||||| Sbjct 1006352 CTAAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGTTGGTCCGGA 1006293 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| || || ||||| |||||| || | | |||| ||||| | || ||| Sbjct 1006292 GGAATACCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCG 1006233 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | ||| |||||||| ||||| || ||||| || ||||| Sbjct 1006232 ACCTCGAGGGTGATCGTCTTGCCGGTGAGAGTCTTGACAAAGATTTGCAT 1006183 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | || || | || | ||| || || ||||||||||| ||| Sbjct 1006184 ATACCACCACGGAGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCG 1006125 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || | || || ||| || || || || || || | || | ||||||||| |||||| Sbjct 1006124 CTAAGCGTGCGCCCATCCTCCAGCTGCTTGCCGGCAAAAATCAAACGCTGTTGATCCGGA 1006065 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || ||||| ||||| ||| | | |||| ||||| | |||||| Sbjct 1006064 GGAATGCCCTCCTTGTCCTGGATCTTGGCTTTGACGTTGTCAATCGTGTCCGACGATTCG 1006005 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | ||| |||||||| ||||| || ||||| || ||||| Sbjct 1006004 ACTTCGAGAGTGATCGTCTTGCCGGTGAGAGTCTTGACAAAGATTTGCAT 1005955 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || ||||| || | || || || || | ||| || || ||||||||||| ||||| Sbjct 1006637 CCACCACGGAGACGCAGCACCAAGTGCAACGTGCTCTCCTTCTGAATGTTGTAGTCGCTG 1006578 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | || ||| ||| || || || || ||||| | || | ||||||||||||||||||| Sbjct 1006577 AGCGTGCGACCATCCTCCAGCTGCTTGCCAGCAAAAATCAAACGCTGTTGGTCCGGAGGA 1006518 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 ||||| || ||||| ||||| || | | |||| ||||| | |||||||| Sbjct 1006517 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATCGTGTCCGACGATTCGACC 1006458 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | || | ||| ||||| || || || || ||||| || ||||| Sbjct 1006457 TCGAGAGTGATCGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1006411 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | || || | || | ||| || || ||||||||||| ||| Sbjct 1005956 ATACCACCACGGAGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCG 1005897 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || | || || ||| || || || || || || | || ||||||||||| |||||| Sbjct 1005896 CTAAGCGTGCGCCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGATCCGGA 1005837 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| || || ||||| |||||| || | | |||| ||||| | |||||| Sbjct 1005836 GGAATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCAATCGTGTCCGACGATTCG 1005777 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | ||| ||||| || || || || ||||| || ||||| Sbjct 1005776 ACCTCGAGAGTGATCGTCTTGCCAGTGAGGGTCTTAACAAAGATTTGCAT 1005727 >seq5 Length=679138 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251 || || || |||||||| ||||||| || ||| ||| || || || || || ||| || Sbjct 231809 TCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAG 231868 Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311 || || ||||||||||||||||| || || || ||||| ||||| || | | Sbjct 231869 ATCAGGCGCTGTTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTC 231928 Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371 || | ||||||| || || || || | ||| | ||| || ||||| || || || || Sbjct 231929 TCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTTCCCGGTAAGGGTCTTGACG 231988 Query 114372 AAAATCTGCATGG 114384 || | ||||||| Sbjct 231989 AACACTTGCATGG 232001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420134359036896