Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01-
09] 8 sequences; 7,757,162 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq1 125 6e-24
seq5 96.9 3e-15
>seq1
Length=1515123
Score = 125 bits (138), Expect = 6e-24
Identities = 163/220 (74%), Gaps = 4/220 (2%)
Strand=Plus/Minus
Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGT-CG 33968
|| ||||||||||| || |||||||||||||||||||||||||| || || || || ||
Sbjct 1006172 AGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTC-GCTAAGCGTGCG 1006114
Query 33969 CTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTC 34028
| | || |||| |||||||||||||| |||| ||||| |||||| || | || |||
Sbjct 1006113 CCCATCCTCCAGCTGCTTGCCGGCAAAAATCAAACGCTGTTGATCCGGAGGAATGCCCTC 1006054
Query 34029 TTTGTCCATAATTTTTTGCTTAATGGAACTCACAC-TATCAGTAGATTCGCATTCGACCG 34087
|||||| | | || |||| | ||| | | || | |||||| ||||| |
Sbjct 1006053 CTTGTCC-TGGATCTTGGCTTTGACGTTGTCAATCGTGTCCGACGATTCGACTTCGAGAG 1005995
Query 34088 TTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127
| || || || ||||| || || || ||||||||||||||
Sbjct 1005994 TGATCGTCTTGCCGGTGAGAGTCTTGACAAAGATTTGCAT 1005955
Score = 123 bits (136), Expect = 2e-23
Identities = 163/221 (74%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGT-CG 33968
|| ||||||||||| || |||||||||||||||||||||||||| || || || || ||
Sbjct 1005944 AGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTC-GCTAAGCGTGCG 1005886
Query 33969 CTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTC 34028
| | || |||| |||||||||||||| ||||| ||||| |||||| || | | |||
Sbjct 1005885 CCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGATCCGGAGGAATACCCTC 1005826
Query 34029 TTTGTCCATAATTTTTTGCTTAATGGAACTCACAC-TATCAGTAGATTCGCATTCGACCG 34087
|||||| ||| || ||| | | ||| | | || | |||||| |||| |
Sbjct 1005825 CTTGTCCTGAATCTTGGCCTTGA-CGTTGTCAATCGTGTCCGACGATTCGACCTCGAGAG 1005767
Query 34088 TTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATT 34128
| || || || || || || || || |||||||||||||||
Sbjct 1005766 TGATCGTCTTGCCAGTGAGGGTCTTAACAAAGATTTGCATT 1005726
Score = 111 bits (122), Expect = 1e-19
Identities = 160/222 (72%), Gaps = 8/222 (4%)
Strand=Plus/Minus
Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGT-CG 33968
|| ||||||||||| || |||||||||||||||||||||||||| || || || || ||
Sbjct 1006400 AGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTC-GCTAAGCGTGCG 1006342
Query 33969 CTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTC 34028
| || |||| |||||||||||||| ||||| ||||| || ||| || | | |||
Sbjct 1006341 GCCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGTTGGTCCGGAGGAATACCCTC 1006282
Query 34029 TTTGTCCATAATTTTTTGCTT---AATGGAACTCACACTATCAGTAGATTCGCATTCGAC 34085
|||||| ||| || ||| | || | || | || | || ||| ||||
Sbjct 1006281 CTTGTCCTGAATCTTGGCCTTGACATTGTCAATC---GTGTCCGACGACTCGACCTCGAG 1006225
Query 34086 CGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127
|| || || || ||||| || || || ||||||||||||||
Sbjct 1006224 GGTGATCGTCTTGCCGGTGAGAGTCTTGACAAAGATTTGCAT 1006183
Score = 89.7 bits (98), Expect = 4e-13
Identities = 155/220 (70%), Gaps = 4/220 (2%)
Strand=Plus/Minus
Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGT-CG 33968
|| |||||||||| || | |||||||||||||||||||||||| || || | || ||
Sbjct 1006628 AGACGCAGCACCAAGTGCAACGTGCTCTCCTTCTGAATGTTGTAGTC-GCTGAGCGTGCG 1006570
Query 33969 CTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTC 34028
| || |||| |||||||| ||||| |||| ||||| || ||| || | || |||
Sbjct 1006569 ACCATCCTCCAGCTGCTTGCCAGCAAAAATCAAACGCTGTTGGTCCGGAGGAATGCCCTC 1006510
Query 34029 TTTGTCCATAATTTTTTGCTTAATGGAACTCACAC-TATCAGTAGATTCGCATTCGACCG 34087
|||||| || || ||| | | ||| | | || | |||||| |||| |
Sbjct 1006509 CTTGTCCTGGATCTTGGCCTTGA-CGTTGTCAATCGTGTCCGACGATTCGACCTCGAGAG 1006451
Query 34088 TTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127
| || || || || || || || || ||||||||||||||
Sbjct 1006450 TGATCGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1006411
>seq5
Length=679138
Score = 96.9 bits (106), Expect = 3e-15
Identities = 103/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959
||| || | ||| ||||| || || || ||||||||||||||||| || ||||| ||
Sbjct 141854 ACCACCGCGCAGACGCAGGACAAGGTGCAGCGTGCTCTCCTTCTGGATATTGTAGTCACT 141795
Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019
|| || | || |||| ||||||||| ||||| |||||||||||||| ||| |||
Sbjct 141794 CAGGGTACGTCCATCCTCCAGTTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGCGG 141735
Query 34020 CACGCTCTCTTTGTCC 34035
| || ||| ||||||
Sbjct 141734 AATGCCCTCCTTGTCC 141719
Score = 91.5 bits (100), Expect = 1e-13
Identities = 104/137 (76%), Gaps = 2/137 (1%)
Strand=Plus/Plus
Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959
||| || | ||| |||||||| || || ||||||||||||||||| |||||||| || ||
Sbjct 231772 ACCACCACGCAGGCGCAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTC-GC 231830
Query 33960 CAATTGT-CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018
| || || | || |||| ||||||||||| || ||||||||||| || ||| |
Sbjct 231831 TCAGCGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAG 231890
Query 34019 GCACGCTCTCTTTGTCC 34035
| | | ||| ||||||
Sbjct 231891 GGATACCCTCCTTGTCC 231907
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397062361286416
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |