Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01- 09] 8 sequences; 7,757,162 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq1 125 6e-24 seq5 96.9 3e-15 >seq1 Length=1515123 Score = 125 bits (138), Expect = 6e-24 Identities = 163/220 (74%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGT-CG 33968 || ||||||||||| || |||||||||||||||||||||||||| || || || || || Sbjct 1006172 AGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTC-GCTAAGCGTGCG 1006114 Query 33969 CTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTC 34028 | | || |||| |||||||||||||| |||| ||||| |||||| || | || ||| Sbjct 1006113 CCCATCCTCCAGCTGCTTGCCGGCAAAAATCAAACGCTGTTGATCCGGAGGAATGCCCTC 1006054 Query 34029 TTTGTCCATAATTTTTTGCTTAATGGAACTCACAC-TATCAGTAGATTCGCATTCGACCG 34087 |||||| | | || |||| | ||| | | || | |||||| ||||| | Sbjct 1006053 CTTGTCC-TGGATCTTGGCTTTGACGTTGTCAATCGTGTCCGACGATTCGACTTCGAGAG 1005995 Query 34088 TTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 | || || || ||||| || || || |||||||||||||| Sbjct 1005994 TGATCGTCTTGCCGGTGAGAGTCTTGACAAAGATTTGCAT 1005955 Score = 123 bits (136), Expect = 2e-23 Identities = 163/221 (74%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGT-CG 33968 || ||||||||||| || |||||||||||||||||||||||||| || || || || || Sbjct 1005944 AGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTC-GCTAAGCGTGCG 1005886 Query 33969 CTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTC 34028 | | || |||| |||||||||||||| ||||| ||||| |||||| || | | ||| Sbjct 1005885 CCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGATCCGGAGGAATACCCTC 1005826 Query 34029 TTTGTCCATAATTTTTTGCTTAATGGAACTCACAC-TATCAGTAGATTCGCATTCGACCG 34087 |||||| ||| || ||| | | ||| | | || | |||||| |||| | Sbjct 1005825 CTTGTCCTGAATCTTGGCCTTGA-CGTTGTCAATCGTGTCCGACGATTCGACCTCGAGAG 1005767 Query 34088 TTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATT 34128 | || || || || || || || || ||||||||||||||| Sbjct 1005766 TGATCGTCTTGCCAGTGAGGGTCTTAACAAAGATTTGCATT 1005726 Score = 111 bits (122), Expect = 1e-19 Identities = 160/222 (72%), Gaps = 8/222 (4%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGT-CG 33968 || ||||||||||| || |||||||||||||||||||||||||| || || || || || Sbjct 1006400 AGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTC-GCTAAGCGTGCG 1006342 Query 33969 CTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTC 34028 | || |||| |||||||||||||| ||||| ||||| || ||| || | | ||| Sbjct 1006341 GCCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGTTGGTCCGGAGGAATACCCTC 1006282 Query 34029 TTTGTCCATAATTTTTTGCTT---AATGGAACTCACACTATCAGTAGATTCGCATTCGAC 34085 |||||| ||| || ||| | || | || | || | || ||| |||| Sbjct 1006281 CTTGTCCTGAATCTTGGCCTTGACATTGTCAATC---GTGTCCGACGACTCGACCTCGAG 1006225 Query 34086 CGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 || || || || ||||| || || || |||||||||||||| Sbjct 1006224 GGTGATCGTCTTGCCGGTGAGAGTCTTGACAAAGATTTGCAT 1006183 Score = 89.7 bits (98), Expect = 4e-13 Identities = 155/220 (70%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGT-CG 33968 || |||||||||| || | |||||||||||||||||||||||| || || | || || Sbjct 1006628 AGACGCAGCACCAAGTGCAACGTGCTCTCCTTCTGAATGTTGTAGTC-GCTGAGCGTGCG 1006570 Query 33969 CTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTC 34028 | || |||| |||||||| ||||| |||| ||||| || ||| || | || ||| Sbjct 1006569 ACCATCCTCCAGCTGCTTGCCAGCAAAAATCAAACGCTGTTGGTCCGGAGGAATGCCCTC 1006510 Query 34029 TTTGTCCATAATTTTTTGCTTAATGGAACTCACAC-TATCAGTAGATTCGCATTCGACCG 34087 |||||| || || ||| | | ||| | | || | |||||| |||| | Sbjct 1006509 CTTGTCCTGGATCTTGGCCTTGA-CGTTGTCAATCGTGTCCGACGATTCGACCTCGAGAG 1006451 Query 34088 TTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 | || || || || || || || || |||||||||||||| Sbjct 1006450 TGATCGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1006411 >seq5 Length=679138 Score = 96.9 bits (106), Expect = 3e-15 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| || | ||| ||||| || || || ||||||||||||||||| || ||||| || Sbjct 141854 ACCACCGCGCAGACGCAGGACAAGGTGCAGCGTGCTCTCCTTCTGGATATTGTAGTCACT 141795 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 || || | || |||| ||||||||| ||||| |||||||||||||| ||| ||| Sbjct 141794 CAGGGTACGTCCATCCTCCAGTTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGCGG 141735 Query 34020 CACGCTCTCTTTGTCC 34035 | || ||| |||||| Sbjct 141734 AATGCCCTCCTTGTCC 141719 Score = 91.5 bits (100), Expect = 1e-13 Identities = 104/137 (76%), Gaps = 2/137 (1%) Strand=Plus/Plus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| || | ||| |||||||| || || ||||||||||||||||| |||||||| || || Sbjct 231772 ACCACCACGCAGGCGCAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTC-GC 231830 Query 33960 CAATTGT-CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018 | || || | || |||| ||||||||||| || ||||||||||| || ||| | Sbjct 231831 TCAGCGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAG 231890 Query 34019 GCACGCTCTCTTTGTCC 34035 | | | ||| |||||| Sbjct 231891 GGATACCCTCCTTGTCC 231907 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397062361286416