Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01-
09] 8 sequences; 7,757,162 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq1 136 4e-27
seq4 118 1e-21
seq5 95.1 1e-14
>seq1
Length=1515123
Score = 136 bits (150), Expect = 4e-27
Identities = 162/217 (75%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
||||| |||||| ||||| ||||||||||| ||||| ||||| || || || || |
Sbjct 1006626 ACGCAGCACCAAGTGCAACGTGCTCTCCTTCTGAATGTTGTAGTCGCTGAGCGTGCGACC 1006567
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
|| || |||||||| ||||| || || | ||||| ||||| | || | || ||||||
Sbjct 1006566 ATCCTCCAGCTGCTTGCCAGCAAAAATCAAACGCTGTTGGTCCGGAGGAATGCCCTCCTT 1006507
Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCAC-CGTGTCGCTCGATTCCACATCGACCGTGA 42171
|||| ||| || |||| ||| | || |||||| |||||| || |||| ||||
Sbjct 1006506 GTCCTGGATCTTGGCCTTGA-CGTTGTCAATCGTGTCCGACGATTCGACCTCGAGAGTGA 1006448
Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| || ||||| || || ||||| ||||||||||||||
Sbjct 1006447 TCGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1006411
Score = 127 bits (140), Expect = 2e-24
Identities = 160/217 (74%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
||||| ||||| |||| ||||||||||| ||||| ||||| || || || ||| |
Sbjct 1006170 ACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTAAGCGTGCGCCC 1006111
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
|| || |||||||| || || || || | ||||| || || | || | || ||||||
Sbjct 1006110 ATCCTCCAGCTGCTTGCCGGCAAAAATCAAACGCTGTTGATCCGGAGGAATGCCCTCCTT 1006051
Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCAC-CGTGTCGCTCGATTCCACATCGACCGTGA 42171
|||| ||| || ||||| ||| | || |||||| |||||| || |||| ||||
Sbjct 1006050 GTCCTGGATCTTGGCTTTGA-CGTTGTCAATCGTGTCCGACGATTCGACTTCGAGAGTGA 1005992
Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| || ||||| || || ||||| ||||||||||||||
Sbjct 1005991 TCGTCTTGCCGGTGAGAGTCTTGACAAAGATTTGCAT 1005955
Score = 123 bits (136), Expect = 3e-23
Identities = 162/219 (74%), Gaps = 4/219 (2%)
Strand=Plus/Minus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
||||| ||||| |||| ||||||||||| ||||| ||||| || || || ||| |
Sbjct 1005942 ACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTAAGCGTGCGCCC 1005883
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
|| || |||||||| || || || || || ||||| || || | || | | ||||||
Sbjct 1005882 ATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGATCCGGAGGAATACCCTCCTT 1005823
Query 42113 GTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTG 42170
|||| ||| | || | |||| ||| | | | |||||| |||||| || |||| |||
Sbjct 1005822 GTCC-TGAATCTTGGCCTTGA-CGTTGTCAATCGTGTCCGACGATTCGACCTCGAGAGTG 1005765
Query 42171 ATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209
|| || ||||| || || ||||| |||||||||||||||
Sbjct 1005764 ATCGTCTTGCCAGTGAGGGTCTTAACAAAGATTTGCATT 1005726
Score = 114 bits (126), Expect = 1e-20
Identities = 157/217 (72%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
||||| ||||| |||| ||||||||||| ||||| ||||| || || || || |
Sbjct 1006398 ACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTAAGCGTGCGGCC 1006339
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
|| || |||||||| || || || || || ||||| ||||| | || | | ||||||
Sbjct 1006338 ATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGTTGGTCCGGAGGAATACCCTCCTT 1006279
Query 42113 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGA 42171
|||| ||| | || | |||| | | | |||||| ||| || || |||| ||||
Sbjct 1006278 GTCC-TGAATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGA 1006220
Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| || ||||| || || ||||| ||||||||||||||
Sbjct 1006219 TCGTCTTGCCGGTGAGAGTCTTGACAAAGATTTGCAT 1006183
>seq4
Length=1215465
Score = 118 bits (130), Expect = 1e-21
Identities = 148/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 42006 TGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGC 42065
|||| ||||||||||| ||||| ||||| || ||| || || |||| || ||||||
Sbjct 412015 TGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCGTCCTCGAGCTGC 411956
Query 42066 TTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTT 42125
||||||||||| || || ||||| ||||| | || | || |||||||||| ||| ||
Sbjct 411955 TTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTG 411896
Query 42126 TGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTT 42185
|||| | | | |||||| ||| || || || | || || || ||||| ||
Sbjct 411895 GCCTTGACATTGTCGATCGTGTCCGACGACTCGACCTCAAGGGTAATCGTCTTGCCAGTC 411836
Query 42186 AGCGTCTTTACAAAGATTTGCAT 42208
|| ||||| || |||||||||||
Sbjct 411835 AGAGTCTTGACGAAGATTTGCAT 411813
>seq5
Length=679138
Score = 95.1 bits (104), Expect = 1e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 41994 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 42053
|||| ||| | || | ||||||||||| || || ||||| || ||| || || |
Sbjct 231785 CGCAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGACCA 231844
Query 42054 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTG 42113
|| || |||||||| || ||||| || || ||||| ||||| | || | | |||||||
Sbjct 231845 TCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGGATACCCTCCTTG 231904
Query 42114 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 42173
||| ||| || || | || | | ||||||| || ||||| |||| |||||
Sbjct 231905 TCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATC 231964
Query 42174 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| || || || || ||||| || || | ||||||
Sbjct 231965 GTCTTCCCGGTAAGGGTCTTGACGAACACTTGCAT 231999
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543212745678720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |