Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01- 09] 8 sequences; 7,757,162 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq8 273 2e-68 seq4 134 1e-26 seq1 123 2e-23 seq5 107 2e-18 >seq8 Length=447081 Score = 273 bits (302), Expect = 2e-68 Identities = 960/1469 (65%), Gaps = 65/1469 (4%) Strand=Plus/Minus Query 153025 ACTGGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGA 153084 || |||||||||| || ||||| || || | ||| || | || || | ||||| ||| Sbjct 58696 ACGGGTTGACCACCTGGAACTCACCGGCAAGCACACGGCGCATGTAAATGTTGCTCGTGT 58637 Query 153085 AAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACG 153144 | || |||||| | ||||| ||| || || ||| ||||| || ||||||||| || Sbjct 58636 ACGGCTCAAAGCACTCGTTGAAGCCAAGGATCTGACTCGTGGAGGCCGTCGGCATGGGCG 58577 Query 153145 CCACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAAT 153204 ||| || || || || |||| |||||| ||| | |||| | || ||| | Sbjct 58576 CCATCAGCAGCGAGTTGCGCAGACCGTGCTGGGCAATCTTTGCCTTGAGCGAGGCCCAGT 58517 Query 153205 CCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGG 153264 ||||||| ||||||| || |||||||||||||||||| | | || | ||| | Sbjct 58516 CCCACAGGTCCGACGGCGTGCGGTTCCACATGTCGTACTGCAGGAGGCCCTGCGAGGCAG 58457 Query 153265 GACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGG--GCCAGTTCGCAGCTAGCCTC 153322 | ||||| | |||| ||| |||| | | || ||||| |||||||| ||| Sbjct 58456 GGCTGCCCTCGTACGTCTCGTATGTGCCAT--ATTCGGCCGCCAGCTCGCAGCTGCGCTC 58399 Query 153323 GAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCT 153382 | || ||| ||| ||||| || ||| || ||| || | | ||| || | ||| Sbjct 58398 CAAGGCCGCATGGTAAATGGTCTCAAAGATCTGCACATTCAGCAGGCGCGCCTCCTGGCT 58339 Query 153383 CTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGAT 153442 ||| |||| || || | || || || ||||| || ||||||| ||||| ||||| Sbjct 58338 GTCGAACGGATAGCCCATGATCATGAACGCATCGGCAAGGCCCTGGACACCGATACCGAT 58279 Query 153443 GGGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCTATGGGATAGTGATTGCGATCGAT 153502 ||| || ||| | ||| ||| | || ||| | | || |||| ||| |||||| Sbjct 58278 GGGGCGGTGCCGCATGTTCGAGCGACGTGCACTCTCCACAGGGTAGTAGTTGATATCGAT 58219 Query 153503 AATTTTGTTGAGGTT-GCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCAT 153561 || ||| ||||| ||| ||||||||| | | | | || | ||| | | Sbjct 58218 GATGCGGTTCAGGTTCTTGCA-CACCACTTTCGACACGTCGTGCAGGCGTTGGAAGTTGT 58160 Query 153562 AGGTCATTTCGTCG-ACGCGTACGCATCGATTCACG--------GCAATAGACGCCAGAT 153612 | ||| |||| | || || | | || || ||| ||||| |||||||| | Sbjct 58159 ATGTC--TTCGAGGCACCGGTGC-CCTCAATAAACGTCGGCAGAGCAATCGACGCCAGGT 58103 Query 153613 TACAGACGGCCGTCTC-TTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTG 153671 | || || || ||||| | ||||| |||||||| | ||||| | ||||||||| | Sbjct 58102 TGCACACAGCTGTCTCGTCCGGCG-AGCTGTACTCGATAATCTCCGTGCAGAGGTTCGAG 58044 Query 153672 CATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGC 153731 | || || ||||| || | ||| || || ||||| || || ||| ||| | || Sbjct 58043 CTCTTGATCGTGCCCAGGTTCTTCTGGTTACTCTTGCGGTTCGCCGAGTCCTTGTACAGG 57984 Query 153732 ATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGATAAACCTA-TGCAGGTCCTGCGC 153790 | | || ||| ||||| | ||||| |||| ||| | | || ||| | |||||| Sbjct 57983 ACAAAAGGATTGCCCGTCTCAATTTGCGCCTCGAGGAT-AGCGTACCACAGCTTCTGCGC 57925 Query 153791 --TCGCA-CCCGC-TGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAA 153846 | || ||| || | ||||||||||| |||||| ||||||||| |||| Sbjct 57924 CTTGACAGAGCGCTTGGC----GCGGCCCTCGCGCTCGTACTTCTCGTACAGAGCATCAA 57869 Query 153847 ACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACA 153906 |||| ||||| |||||||| || || || || |||| || |||||||||||||| Sbjct 57868 ACTCCTCGCCATAGCAGTCAGCCAGACCTGGGCACTCGGCGGGGCACATCAGCGACCA-- 57811 Query 153907 TATCGTCGGCGTT------GACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACA 153960 |||| |||| ||| || |||||||||||||| || | ||| ||||| | Sbjct 57810 ----GTCGCCGTTCTGTTCGACACGGCGCATGAACAGATCGGGAATCCACAGCGCCAGGA 57755 Query 153961 TGAGGTCGCGCGCCTTGCA-ATCCTCCGCGCCCATG----TTGCGTTTCAGATTGAGCAC 154015 |||||||||| | ||| |||||| | ||||| ||||| ||||| | | Sbjct 57754 ACAGGTCGCGCG-CGCGCACTTCCTCCTTG-CCATGGTTCTTGCG---CAGATCAATAAA 57700 Query 154016 GCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGC---TT 154072 | | | ||| | |||||| || || | ||||| || | ||| || ||| || Sbjct 57699 TTCAAAAACGTCCGAGTGCCACGGCTCCAGGTAGATCGCAAAGGCGCCCGGGCGCTTGTT 57640 Query 154073 TCCGCCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCC 154132 |||||||| || |||| |||| || | |||||| | ||||| | |||||| | | || Sbjct 57639 GCCGCCCTGGTCCACGTAGCGCGCCGTGTTGTTGTACACGCGGAGCATGGGCACAATACC 57580 Query 154133 GCTTGC-GGTGCCGTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGT 154191 | |||| ||||| || ||| | ||| || || | | || | || Sbjct 57579 G-TTGCTCACACCGTTCGTGCCGGCGATGTACGAGCCCGTCGCACGAATGTTGTGGATGT 57521 Query 154192 TAACGCCAATGCCGCC-GCCGTACTT--TGAT-ATGGCAGCGCAGTCGCCCAGCGTCCTG 154247 | | ||||| ||||| ||||| ||| |||| || ||| ||| ||||| | Sbjct 57520 TCAGACCAATACCGCCGGCCGT-CTTGCTGATCATCGCA---CAGGTCTTGAGCGTGTCG 57465 Query 154248 TAGATGCCGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGA 154307 || || || ||||| ||||| | | | | ||| ||||| ||||||| || Sbjct 57464 TATATACCCTCGATCGAGTCGTCCTTCATACTCACAAGGAAGCACGACGACATTTGGGGG 57405 Query 154308 ATGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATC 154367 || |||| || || || ||||| || |||||| ||||| || | | ||| Sbjct 57404 TTGGGCGTGCCGGCATTGAACAGGGTCGGCGACGCGTGTGTAAAGGCCTTCTCGGACATG 57345 Query 154368 ATGCGGTACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGC 154427 | |||||| ||||| ||| | | || |||||||| ||||||| ||||||||| Sbjct 57344 TAGTTGTACGTCTCGATCGCGCTCGCCACGTCCTCGCCGTGGATGCCGACGGCGACGCGC 57285 Query 154428 ATGAGCATGTGCTGCGGACGTTCGGCGAC 154456 |||||||||||||| || || || || || Sbjct 57284 ATGAGCATGTGCTGGGGGCGCTCCGCAAC 57256 Score = 214 bits (236), Expect = 2e-50 Identities = 324/458 (71%), Gaps = 5/458 (1%) Strand=Plus/Minus Query 52382 CGCCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGG 52441 |||| || | | |||||| | |||||||| ||| ||||||||| | ||||| || || Sbjct 45438 CGCCTCGTTCTCGGAGCGCCTTGTGGCCTTTGCCGCCGTCGAGGGCATCTTTTTCTCGGG 45379 Query 52442 CAGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAG 52501 | |||||| ||||||| | | || | | ||| | ||||| || ||| ||||| Sbjct 45378 CTCGTTTGCCTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCTGGTCTGTCGTTCTC 45319 Query 52502 CAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAA 52561 |||||| | || ||||||||||| || |||||||| |||||||| || ||| | || Sbjct 45318 GAACGAGCTCATCTCGCGCGACGAGGGCCTGCACACCGACTTTGCCTGTCTCCTGTTCAG 45259 Query 52562 GACGCGCGTGACCGAAAAATTGG-ATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGG 52620 | | ||| ||| | | | | |||||| | |||| ||| ||||| | Sbjct 45258 C---CACCTGAA-GAAGCGTGCGCACCCTGACACGGTGAACCGCATCATCACCGAGGCTG 45203 Query 52621 TGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACG 52680 |||| || || |||| ||||| || | ||| |||| || |||| | |||||||||| Sbjct 45202 TGGCCATTGAGCAGGACTTTTTGACCGACGCCTTGCCTGTTTCGCTGATCGGCATGAACG 45143 Query 52681 CGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGC 52740 ||| ||||||| |||||||||||||||||||||| |||||| | || | ||||| Sbjct 45142 CGCGCCTCATGTGCCAGTACATCGAGTTTGTGGCGGACCGTCTGCTCGTCAACCTCGGCA 45083 Query 52741 AGCCAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGG 52800 | || ||| ||| |||| | || || || || |||||| | ||||| ||||| ||| Sbjct 45082 ACCCGAAGCACTACAACTCGACGAACCCCTTCGACTTTATGGAGAACATCTCGCTCCAGG 45023 Query 52801 GCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTAT 52838 ||||| | |||||||||||| || || | ||| ||| Sbjct 45022 GCAAGTCGAACTTTTTCGAGCGCCGCGTTGCCGACTAT 44985 >seq4 Length=1215465 Score = 134 bits (148), Expect = 1e-26 Identities = 149/196 (76%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| ||||||||||||||||||| || || ||||||||| || ||||| | | Sbjct 412004 CTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAA 411945 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATT 138541 ||| |||||||||||||||||||| || || || ||||| ||| || || | ||| Sbjct 411944 GATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 411885 Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601 | || | ||||| | |||||| ||||| | || | ||| || ||||||||||| || | Sbjct 411884 G-TCGATCGTGTCCGACGACTCGACCTCAAGGGTAATCGTCTTGCCAGTCAGAGTCTTGA 411826 Query 138602 CAAAAATCTGCATGGC 138617 | || || |||||||| Sbjct 411825 CGAAGATTTGCATGGC 411810 >seq1 Length=1515123 Score = 123 bits (136), Expect = 2e-23 Identities = 146/194 (75%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| ||||||||||||||||| | || || ||||| || || || |||| | | Sbjct 1006374 CTCCTTCTGAATGTTGTAGTCGCTAAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAA 1006315 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG--TTTTAAT 138540 ||| |||||||||||||||||||| ||||| || ||||| ||| | || | || || Sbjct 1006314 GATCAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTC-CTGAATCTTGGCCTTGACAT 1006256 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 || || | ||||| | |||||| ||||||| || | ||| || || || ||||| || Sbjct 1006255 TG-TCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTTGCCGGTGAGAGTCTTG 1006197 Query 138601 ACAAAAATCTGCAT 138614 ||||| || ||||| Sbjct 1006196 ACAAAGATTTGCAT 1006183 Score = 114 bits (126), Expect = 1e-20 Identities = 144/194 (74%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| ||||||||||||||||| | || ||| ||||| || || || |||| | | Sbjct 1005918 CTCCTTCTGAATGTTGTAGTCGCTAAGCGTGCGCCCATCCTCCAGCTGCTTGCCGGCAAA 1005859 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--T 138540 || ||||||||||| |||||||| ||||| || ||||| ||| | || | || | | Sbjct 1005858 AATCAGACGCTGTTGATCCGGAGGAATACCCTCCTTGTC-CTGAATCTTGGCCTTGACGT 1005800 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 || || | ||||| | ||| || ||||||| || | ||| || ||||| || || || Sbjct 1005799 TG-TCAATCGTGTCCGACGATTCGACCTCGAGAGTGATCGTCTTGCCAGTGAGGGTCTTA 1005741 Query 138601 ACAAAAATCTGCAT 138614 ||||| || ||||| Sbjct 1005740 ACAAAGATTTGCAT 1005727 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| ||||||||||||||||| | || ||| ||||| || || || |||| | | Sbjct 1006146 CTCCTTCTGAATGTTGTAGTCGCTAAGCGTGCGCCCATCCTCCAGCTGCTTGCCGGCAAA 1006087 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTG 138542 || | ||||||||| |||||||| || || || ||||| ||| || ||| | | Sbjct 1006086 AATCAAACGCTGTTGATCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCTTTGACGTT 1006027 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | ||||| | ||| || || |||| || | ||| || || || ||||| || || Sbjct 1006026 GTCAATCGTGTCCGACGATTCGACTTCGAGAGTGATCGTCTTGCCGGTGAGAGTCTTGAC 1005967 Query 138603 AAAAATCTGCAT 138614 ||| || ||||| Sbjct 1005966 AAAGATTTGCAT 1005955 Score = 98.7 bits (108), Expect = 1e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| ||||||||||||||||| | || || ||||| || || || || | | | Sbjct 1006602 CTCCTTCTGAATGTTGTAGTCGCTGAGCGTGCGACCATCCTCCAGCTGCTTGCCAGCAAA 1006543 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTG 138542 || | |||||||||||||||||| || || || ||||| ||| || || | | Sbjct 1006542 AATCAAACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 1006483 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | ||||| | ||| || ||||||| || | ||| || ||||| || || || || Sbjct 1006482 GTCAATCGTGTCCGACGATTCGACCTCGAGAGTGATCGTCTTGCCAGTGAGGGTCTTGAC 1006423 Query 138603 AAAAATCTGCAT 138614 ||| || ||||| Sbjct 1006422 AAAGATTTGCAT 1006411 >seq5 Length=679138 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || |||||||||||||||| || || ||||| || || || |||| | Sbjct 231808 CTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGACCATCCTCCAGCTGCTTGCCGGCGAA 231867 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTG 138542 ||| || ||||||||||||||||| ||||| || ||||| ||| || || | | Sbjct 231868 GATCAGGCGCTGTTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTCACATT 231927 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | ||||||| ||||||||||||| || | ||| || || || || || || || Sbjct 231928 CTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTTCCCGGTAAGGGTCTTGAC 231987 Query 138603 AAAAATCTGCATGG 138616 || | ||||||| Sbjct 231988 GAACACTTGCATGG 232001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262350373760