Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01- 09] 8 sequences; 7,757,162 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq8 152 5e-32 seq4 136 4e-27 seq1 131 2e-25 seq5 113 4e-20 >seq8 Length=447081 Score = 152 bits (168), Expect = 5e-32 Identities = 299/441 (68%), Gaps = 21/441 (5%) Strand=Plus/Minus Query 47148 GCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTACATG 47207 || || ||| |||||||||| |||| ||||||||| ||||| | || || | | Sbjct 45413 GCCTTTGCCGCCGTCGAGGGCATCTTTTTCTCGGGCTCGTTTGCCTCCATCTTCTGGCTC 45354 Query 47208 AAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACGAA 47267 || | || | ||||| || || |||| |||||||| |||||| | ||||| Sbjct 45353 AAGAAGCGCGGCCTCATGCCTGGTCTGTCGTTCTCGAACGAGCTCATCTCGCGCGACGAG 45294 Query 47268 GGCCTGCACACCAACTTTGCCTGTCTCTACTACAAC-ACTAGAGTCGATCAAAAGTTGGA 47326 |||||||||||| |||||||||||||| | || | || || | ||| Sbjct 45293 GGCCTGCACACCGACTTTGCCTGTCTCCTGTTCAGCCACCTGA-------AGAAG----- 45246 Query 47327 CGTGCCCACCGTCA----GCGA----CATGTTTGCCGAAGCCGTCGCCATTGAGATGGAG 47378 ||||| |||| | | | || ||| | |||| || || ||||||||| ||| Sbjct 45245 CGTGCGCACCCTGACACGGTGAACCGCATCATCACCGAGGCTGTGGCCATTGAGCAGGAC 45186 Query 47379 TTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAG 47438 ||||| |||| || |||| | || | | || ||||||||| | ||| | || Sbjct 45185 TTTTTGACCGACGCCTTGCCTGTTTCGCTGATCGGCATGAACGCGCGCCTCATGTGCCAG 45126 Query 47439 TACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTACCAC 47498 |||||||| ||||| || ||||| |||||||| | || | || ||| ||| || Sbjct 45125 TACATCGAGTTTGTGGCGGACCGTCTGCTCGTCAACCTCGGCAACCCGAAGCACTACAAC 45066 Query 47499 ACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTC 47558 | ||| || ||||| |||||| | ||||| |||||| |||||||| | ||||||||| Sbjct 45065 TCGACGAACCCCTTCGACTTTATGGAGAACATCTCGCTCCAGGGCAAGTCGAACTTTTTC 45006 Query 47559 GAGAAGCGCGTCGGCGAATAT 47579 ||| ||||| | ||| ||| Sbjct 45005 GAGCGCCGCGTTGCCGACTAT 44985 Score = 111 bits (122), Expect = 1e-19 Identities = 941/1491 (63%), Gaps = 96/1491 (6%) Strand=Plus/Minus Query 146060 ACTGGTTGACCACCTGAAACTCGCCGGCGAGAACGCGCCTCAGATACACGTTGCTGGTGA 146119 || ||||||||||||| ||||| ||||| || || || | || || | |||||| ||| Sbjct 58696 ACGGGTTGACCACCTGGAACTCACCGGCAAGCACACGGCGCATGTAAATGTTGCTCGTGT 58637 Query 146120 ACGGCTCGAACGACTCGTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCATGTACG 146179 ||||||| || |||||||| || || ||||| ||| | || || |||||| || Sbjct 58636 ACGGCTCAAAGCACTCGTTGAAGCCAAGGATCTGACTCGTGGAGGCCGTCGGCATGGGCG 58577 Query 146180 CCACCAGCAAAGAGTTTCTCACGCCGTGTCTTTG-AATCTTTTCCCGTAGTTTGGACCAA 146238 ||| ||||| ||||| | || ||||| || | ||||||| || || || ||| Sbjct 58576 CCATCAGCAGCGAGTTGCGCAGACCGTG-CTGGGCAATCTTTGCCTTGAGCGAGGCCCAG 58518 Query 146239 TTCCACAAATGATCCGTGGGATAGATATTGTAGTTGTCGTAATGCATAGTGCC--GCGGA 146296 | ||||| | |||| || | || | ||||||| |||| ||| ||| Sbjct 58517 TCCCACA---GGTCCGACGGCGTGCGGTTCCACATGTCGTACTGCAGGAGGCCCTGCGAG 58461 Query 146297 ACAGGGGGCTATTCTCGTACGATTCATAAGGACCGTCGATCTTG--GCCAGTTCGCAGCT 146354 ||||| || |||||||| || || | || | || | ||||| |||||||| Sbjct 58460 GCAGGG--CTGCCCTCGTACGTCTCGTATGTGCCAT--ATTCGGCCGCCAGCTCGCAGCT 58405 Query 146355 AGCTTCCAGAGCCGAAAAGTATATGGTCTCCGCGATC-----ATGTAGTTGACGCTCCTG 146409 |||| |||| | ||| |||||||| |||| || || | ||| Sbjct 58404 GCGCTCCAAGGCCGCATGGTAAATGGTCTCAAAGATCTGCACATTCAGCAGGCGC----- 58350 Query 146410 GCCTCCTCGCTGTCGTAGGGGATATCG-AGAAGCACAAAGGCGTCGGCGAGACCCTGTAT 146468 ||||||| ||||||| | || ||| | | | || || || ||||| || ||||| | Sbjct 58349 GCCTCCTGGCTGTCGAACGG-ATAGCCCATGATCATGAACGCATCGGCAAGGCCCTGGAC 58291 Query 146469 CCCGACACCAACGGGGCGGTGTTTCTTGTTACTGTTCGCAGCGCCCGC---AGTGGGATA 146525 |||| ||| | ||||||||| | |||| | || | || | | | ||| || Sbjct 58290 ACCGATACCGATGGGGCGGTGCCGCATGTTCGAG--CGACGTGCACTCTCCACAGGG-TA 58234 Query 146526 GTGGTTGCTGTCGATGATCTTGTTGAGATTAC-GCACGACAATTTTCGTCAAACGATTCA 146584 || |||| | |||||||| ||| || || |||| || | ||||| || || | Sbjct 58233 GTAGTTGATATCGATGATGCGGTTCAGGTTCTTGCAC-ACCACTTTCGACA--CG-TCGT 58178 Query 146585 GCAGGACAT---AGTCAAATGTTTTAGTTTTAACGTTGACG-CACTTGTTGACGGCG--- 146637 ||||| | ||| |||| || | | || || | || | | |||| Sbjct 58177 GCAGGCGTTGGAAGTTGTATGTCTTCGAGGCACCGGTGCCCTCAATAAACGTCGGCAGAG 58118 Query 146638 --ATAGAGGCCAAGTTACATACGGCAGTCTCGTCCTTGTCGCAATACTGCACAATCTCGG 146695 || || |||| ||| || || || ||||||||| || |||| | |||||| | Sbjct 58117 CAATCGACGCCAGGTTGCACACAGCTGTCTCGTCCGGCGAGCTGTACTCGATAATCTCCG 58058 Query 146696 CGCAGAGGTTGCTGCACTTGATGATGCCCAAAtttttttGGTTACTAAACTTG---TTGC 146752 ||||||||| || |||||| |||||| || || |||||||| |||| || Sbjct 58057 TGCAGAGGTTCGAGCTCTTGATCGTGCCCAGGTTCTTCTGGTTACT---CTTGCGGTTCG 58001 Query 146753 AGGGGTCCTTGTAGAGCATGTACGGTCCCCCGGTTTCGACATTGGTCTCGACGATGAATC 146812 | ||||||||| || | | || || || || | | | ||||| ||| | | Sbjct 58000 CCGAGTCCTTGTACAGGACAAAAGGATTGCCCGTCTCAATTTGCGCCTCGAGGAT--AGC 57943 Query 146813 TAAACAAATCT-CTG-GCCTTTACTTGTCTTTCGTACAGTTTATTCTTTTCGTATTTCTC 146870 | || | || ||| ||||| || | | | | | ||||| ||||| Sbjct 57942 GTACCACAGCTTCTGCGCCTTGACAGAGCGCTTGGCGCGGCCCTCGCGCTCGTACTTCTC 57883 Query 146871 GTACAATATTTCAAAA--CTAGAACCGTACTCGTCGAGGAGGCCGGGATACTTTTTGGGA 146928 ||||| ||||| || | || || ||| || || || ||| ||| Sbjct 57882 GTACAGAGCATCAAACTCCTCG--CCATAGCAGTCAGCCAGACCTGGGCACTCGGCGGGG 57825 Query 146929 CAGAACAGCGACCATTCTTTATTCTCCTTCACGCGTTCCATAAACAAATCGGGAATCCAA 146988 || | ||||||||| || |||| | || || ||| |||| |||||||||||| Sbjct 57824 CACATCAGCGACCAGTCGCCGTTCTGTTCGACACGGCGCATGAACAGATCGGGAATCCAC 57765 Query 146989 AGGCCCAGCATCAAGTCGCGAGCCTTGGCGTCCTCGGAGCCCATGTTGCGTCTCAAGTTG 147048 || |||| | || |||||| || | ||||| ||| ||| | | | || | Sbjct 57764 AGCGCCAGGAACAGGTCGCGCGCGCGCACTTCCTCCTTGCC-ATGGTTCTTGCGCAGATC 57706 Query 147049 AGGACAT-CGTAAATTTCCGGATGCCAAGGCTCCACGTATGCGGCGAGTGCGCCTTTTCG 147107 | | || | ||| |||| ||||| ||||||| ||| || | ||||| || Sbjct 57705 AATAAATTCAAAAACGTCCGAGTGCCACGGCTCCAGGTAGATCGCAAAGGCGCCCGGGCG 57646 Query 147108 CTTA---CCGCCCTGATCGACGTGGCGCACCATGTTATTGAAGACTCGTAACATGGACAC 147164 ||| |||||||| || |||| |||| || |||| ||| | || || | ||||| ||| Sbjct 57645 CTTGTTGCCGCCCTGGTCCACGTAGCGCGCCGTGTTGTTGTACACGCGGAGCATGGGCAC 57586 Query 147165 GAGGCCG---------CCGGATTTTGTGGTGCCGTTGTATTGAGCGCTGACGC------- 147208 | ||| ||| || ||| | || |||| |||| | | ||| Sbjct 57585 AATACCGTTGCTCACACCG---TTCGTGCCGGCGATGTAC-GAGCCC-GTCGCACGAATG 57531 Query 147209 -TTTGCACGCTCAGCCCGAGACCTCCGCCCAGATTCGAAATCAAAGC---GGACTCGTGC 147264 | || | | |||| || | ||| ||| || || |||| || || || | || Sbjct 57530 TTGTGGATGTTCAGACCAATACCGCCGGCCGTCTTGCTGATCATCGCACAGGTCTTGAGC 57471 Query 147265 AAGGTCTTGTAGATGCCGTCGATGCTGTCTTCCTTGATGCATTGCAGGAAACACGAACAC 147324 || | ||| || || ||||| ||| ||||| || | ||||| ||||| || Sbjct 57470 ---GTGTCGTATATACCCTCGATCGAGTCGTCCTTCATACTCACAAGGAAGCACGACGAC 57414 Query 147325 ATTTGGGGACGACACGTGCCCGCCGCAAACAGCGTGGGGCTGGCGTGCGTGAACG--TGC 147382 |||||||| |||||| || ||||| || || ||||| || || | | | Sbjct 57413 ATTTGGGGGTTGGGCGTGCCGGCATTGAACAGGGTCGGCGACGCGTGTGTAAAGGCCTTC 57354 Query 147383 CCAGACTCATCAATTGATACGTTTCAATGGCGCTCATAACGTCATCGCCGTGAATGGCCA 147442 | ||| | | ||| ||||| || || |||||| ||||| |||||||| ||| | | Sbjct 57353 TCGGACATGT-AGTTG-TACGTCTCGATCGCGCTCGCCACGTCCTCGCCGTGGATGCCGA 57296 Query 147443 GGGCGACGCGCATGAGCATGTGCTGGGGTCGTTCCGCAATCACGTCATTGA 147493 ||||||||||||||||||||||||||| || ||||||| | | |||||| Sbjct 57295 CGGCGACGCGCATGAGCATGTGCTGGGGGCGCTCCGCAACCTTGCCATTGA 57245 >seq4 Length=1215465 Score = 136 bits (150), Expect = 4e-27 Identities = 147/195 (75%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || ||||| ||||| |||| || ||||||| || || ||||| || |||||| | Sbjct 412004 CTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAA 411945 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTG 127041 ||||| ||||| || || ||||| ||||||||||||||| ||| || ||||| | Sbjct 411944 GATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 411885 Query 127042 TTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 |||| ||||||| |||||| || | ||| | ||| ||||| |||||||| || || Sbjct 411884 GTCGATCGTGTCCGACGACTCGACCTCAAGGGTAATCGTCTTGCCAGTCAGAGTCTTGAC 411825 Query 127102 AAAAATCTGCATGGC 127116 || || |||||||| Sbjct 411824 GAAGATTTGCATGGC 411810 >seq1 Length=1515123 Score = 131 bits (144), Expect = 2e-25 Identities = 174/238 (73%), Gaps = 3/238 (1%) Strand=Plus/Minus Query 126877 CTATACTGCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATT 126936 || ||||| ||||| || | |||| |||||| || | ||| ||| || ||||| || Sbjct 1006646 CTTTACTGG-CCACCACGGAGACGCAGCACCAAGTGCAACGTGCTCTCCTTCTGAATGTT 1006588 Query 126937 GTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTG 126996 ||| |||| | ||||||| ||| || ||||| || ||||| | ||||| ||||| || Sbjct 1006587 GTAGTCGCTGAGCGTGCGACCATCCTCCAGCTGCTTGCCAGCAAAAATCAAACGCTGTTG 1006528 Query 126997 ATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCG 127055 || ||||| ||||||||||||||| ||| || ||||| |||| || | ||||||| Sbjct 1006527 GTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG-TCAATCGTGTCCG 1006469 Query 127056 TACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||| |||| || | ||| ||||| || || || || ||||| || ||||| Sbjct 1006468 ACGATTCGACCTCGAGAGTGATCGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1006411 Score = 129 bits (142), Expect = 6e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| ||||| || | ||| ||| || ||||| ||||| |||| Sbjct 1006181 CCACCACGGAGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTA 1006122 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || ||||| || || || | ||||| ||||| ||||| ||||| Sbjct 1006121 AGCGTGCGCCCATCCTCCAGCTGCTTGCCGGCAAAAATCAAACGCTGTTGATCCGGAGGA 1006062 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||||||||||||| ||| || |||| |||| || | ||||||| ||||| Sbjct 1006061 ATGCCCTCCTTGTCCTGGATCTTGGCTTTGACGTTG-TCAATCGTGTCCGACGATTCGAC 1006003 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||| || | ||| |||||||| ||||| || ||||| || ||||| Sbjct 1006002 TTCGAGAGTGATCGTCTTGCCGGTGAGAGTCTTGACAAAGATTTGCAT 1005955 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| ||||| || | ||| ||| || ||||| ||||| |||| Sbjct 1006409 CCACCACGGAGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTA 1006350 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || ||||| || || || |||||| ||||| || || ||||| Sbjct 1006349 AGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGTTGGTCCGGAGGA 1006290 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| || || ||||| | || | ||||||| |||||| Sbjct 1006289 ATACCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACC 1006230 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| ||| | ||| |||||||| ||||| || ||||| || ||||| Sbjct 1006229 TCGAGGGTGATCGTCTTGCCGGTGAGAGTCTTGACAAAGATTTGCAT 1006183 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| ||||| || | ||| ||| || ||||| ||||| |||| Sbjct 1005953 CCACCACGGAGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTA 1005894 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || ||||| || || || | |||| ||||| ||||| ||||| Sbjct 1005893 AGCGTGCGCCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGATCCGGAGGA 1005834 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||||||| || || ||||| |||| || | ||||||| ||||| Sbjct 1005833 ATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTG-TCAATCGTGTCCGACGATTCGAC 1005775 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || | ||| ||||| || || || || ||||| || ||||| Sbjct 1005774 CTCGAGAGTGATCGTCTTGCCAGTGAGGGTCTTAACAAAGATTTGCAT 1005727 >seq5 Length=679138 Score = 113 bits (124), Expect = 4e-20 Identities = 164/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || ||||| || | |||| ||| | || | ||| ||| || || || ||||| ||| Sbjct 231770 GCACCACCACGCAGGCGCAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCG 231829 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 | || ||||||| ||| || ||||| || || ||| |||||| ||||| || || ||| Sbjct 231830 CTCAGCGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGA 231889 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063 || || |||||||||||| ||| || ||| | | |||| ||||| | | ||| Sbjct 231890 GGGATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCC 231949 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 127115 || |||| ||| | ||| || ||||| || || || || || | ||||||| Sbjct 231950 ACCTCGAGGGTGATCGTCTTCCCGGTAAGGGTCTTGACGAACACTTGCATGG 232001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500752449920