Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01- 09] 8 sequences; 7,757,162 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq8 134 1e-26 seq1 116 3e-21 >seq8 Length=447081 Score = 134 bits (148), Expect = 1e-26 Identities = 707/1117 (63%), Gaps = 55/1117 (5%) Strand=Plus/Plus Query 123235 CCATGCTGCGAGTTTACAATAACGCCGTGCGGCACGTCGACCAGGGCGGCAAA---CGCA 123291 ||||||| || || ||||| ||| | | ||| |||| |||||||||||||| ||| Sbjct 57590 CCATGCTCCGCGTGTACAACAACACGGCGCGCTACGTGGACCAGGGCGGCAACAAGCGCC 57649 Query 123292 AAGGCGCGATGGCGATCTATCTAGAACCGTGGCACGTTGATGTGTACGATTTTTTAAATT 123351 ||||| | |||||||| || || ||||||||| || || | || ||| | || Sbjct 57650 CGGGCGCCTTTGCGATCTACCTGGAGCCGTGGCACTCGGACGTTTTTGAATTTATTGATC 57709 Query 123352 TAAAACGCAA----CATGGGGGCGGAAGAAAAGAAAGCCCGCGATTTGTTGTACGCTTTA 123407 | ||||| ||||| ||| ||| | || ||||| |||| || | Sbjct 57710 TG---CGCAAGAACCATGGCAA-GGAGGAAGTGCGCGCGCGCGACCTGTTCCTGGCGCTG 57765 Query 123408 TGGGTACCCGATTTGTTTATGCGACGCGTAAAAGACGACGGCGTGTGGTCGCTCATGTGT 123467 ||| | |||||| |||| ||||| || || || | |||||| |||||||| ||||| Sbjct 57766 TGGATTCCCGATCTGTTCATGCGCCGTGTCGAACAGAACGGCGACTGGTCGCTGATGTGC 57825 Query 123468 CCCGATCGGTGTCCCGGCTTGAGCGACGTTTACGGCAATCAGTTTGACGAGTTGTACGCG 123527 |||| ||| || || || ||| || ||| | ||||||| | |||||| | Sbjct 57826 CCCGCCGAGTGCCCAGGTCTGGCTGACTGCTATGGCGAGGAGTTTGATGCTCTGTACGAG 57885 Query 123528 CAATACGAGCGCGAAGGCA-----AACAGGTTAGTCAGGTTCCGGCACGTGATTTGTTCA 123582 | ||||||||||| ||| || | | |||| | | | | || || | Sbjct 57886 AAGTACGAGCGCGAGGGCCGCGCCAAGCGCTCTGTCAAGGCGCAGAAGCTG---TGGT-- 57940 Query 123583 AATTTATTATCGAAACACAAGTCGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCT 123642 | ||| |||| | ||| | || || || | || | | || ||||| ||| | Sbjct 57941 ACGCTATCCTCGAGGCGCAAATTGAGACGGGCAATCCTTTTGTCCTGTACAAGGACTCGG 58000 Query 123643 GCAACAGGAAAACCAATCAGAGCAACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCG 123702 ||| | || | || |||| ||| |||| || || || | || || ||| | | Sbjct 58001 CGAACCGCAAGAGTAACCAGAAGAACCTGGGCACGATCAAGAGCTCGAACCTCTGCACGG 58060 Query 123703 AAATTATCGAATACAGCGATGCCGATCAAGTG-GCCGTGTGTAATTTGGCTTCGATT--- 123758 | |||||||| |||||| |||| | || || ||||| || |||| |||||| Sbjct 58061 AGATTATCGAGTACAGCTC-GCCGGACGAGACAGCTGTGTGCAACCTGGCGTCGATTGCT 58119 Query 123759 --------------TGCGTGAATCGTTGCGTCGAAAACGGCGCTTTTAATTTCCAAACGC 123804 || | | | || ||| ||||| || | || |||||| ||| Sbjct 58120 CTGCCGACGTTTATTGAGGGCACCGGTGCCTCGAAGACA-----TACAACTTCCAA-CGC 58173 Query 123805 TCAAACG-CATAACAAAAACTGTAGTAAAGAATTTGAACAAAATTATCGATGTTAATTTT 123863 ||| | | | ||| || ||||| ||||| || |||||| | || | Sbjct 58174 CTGCACGACGTGTCGAAAGTGGTGTGCAAGAACCTGAACCGCATCATCGATATCAACTAC 58233 Query 123864 TATCCTTTGGAGGAAGCGCGTTTGTCTAATTTGAAACACAGACCGGTCGGAGTGGGCATT 123923 || ||| ||||| || ||| || || || ||| | || |||| | || | Sbjct 58234 TACCCTGTGGAGAGTGCACGTCGCTCGAACATGCGGCACCGCCCCATCGGTATCGGTGTC 58293 Query 123924 CAAGGGTTGGCCGACGCGTTTGTAATGCTGCGCATGCCGTACGAAAGCGACGAAGCAAAG 123983 || || | ||||| ||||| | || || || |||| ||| ||| | || || Sbjct 58294 CAGGGCCTTGCCGATGCGTTCATGATCATGGGCTATCCGTTCGACAGCCAGGAGGCGCGC 58353 Query 123984 TTGCTTAATACGCAAATAGCCGAAACAATTTATTACGGCGCTTTGGAGGCGAGCTGCGAA 124043 |||| ||| ||| || || || ||||| | | || |||||| |||||||| Sbjct 58354 CTGCTGAATGTGCAGATCTTTGAGACCATTTACCATGCGGCCTTGGAGCGCAGCTGCGAG 58413 Query 124044 CTTGCGAA--AATTCACGGCGCGTACGAAAGTTACGCGGGCAGCCCGGCGAGCCGAGGTA 124101 || ||| ||| | ||| | ||||| | |||| ||||||||| || | || Sbjct 58414 CTGGCGGCCGAAT--ATGGCACATACGAGACGTACGAGGGCAGCCCTGCCTCGCAGGGCC 58471 Query 124102 TTTTGCAGTACGACATGTGGAATGCTACACCGACAAATTTGTGGGACTGGAGCGTT--TT 124159 | ||||||||||||||||||| || ||| | | ||||||||||| || | | Sbjct 58472 TCCTGCAGTACGACATGTGGAACCGCACGCCGTCGGACCTGTGGGACTGG-GCCTCGCTC 58530 Query 124160 AAAACAACGCATATCGACGCACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATGCCGAC 124219 || ||| | | | | ||||||| |||| ||||||||| || ||||| ||||||||| Sbjct 58531 AAGGCAAAGATTGCCCA-GCACGGTCTGCGCAACTCGCTGCTGATGGCGCCCATGCCGAC 58589 Query 124220 GGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCTTCGAGCCGTTCACTAACAATTT 124279 ||| |||| ||| || | || |||||| | ||| ||||||| ||| | ||| | Sbjct 58590 GGCCTCCACGAGTCAGATCCTTGGCTTCAACGAGTGCTTTGAGCCGTACACGAGCAACAT 58649 Query 124280 GTACGTGCGACGAGTGTTAGCCGGCGATTTTCAAGTG 124316 ||| |||| || ||| | ||||| || || || ||| Sbjct 58650 TTACATGCGCCGTGTGCTTGCCGGTGAGTTCCAGGTG 58686 >seq1 Length=1515123 Score = 116 bits (128), Expect = 3e-21 Identities = 166/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | || ||| || |||||||| ||||| || || || || ||| Sbjct 1006184 ATACCACCACGGAGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCG 1006125 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || | || ||| |||| || || || || | ||||| || || || ||||| Sbjct 1006124 CTAAGCGTGCGCCCATCCTCCAGCTGCTTGCCGGCAAAAATCAAACGCTGTTGATCCGGA 1006065 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 |||||||| || || || || || || ||||| || | || | ||||| || || || Sbjct 1006064 GGAATGCCCTCCTTGTCCTGGATCTTGGCTTTGA-CGTTGTCAATCGTGTCCGACGATTC 1006006 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||||||||| | ||| |||||||| ||||| || ||||| |||||||| Sbjct 1006005 GACTTCGAGAGTGATCGTCTTGCCGGTGAGAGTCTTGACAAAGATTTGCAT 1005955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452003154799680