Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01-
09] 8 sequences; 7,757,162 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq1 122 2e-22
seq5 118 2e-21
>seq1
Length=1515123
Score = 122 bits (134), Expect = 2e-22
Identities = 160/219 (73%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAA-GT 199467
|| || | ||| || ||||| || || |||||| || | ||||||||| || || ||
Sbjct 1006403 CGGAGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTC-GCTAAGCGT 1006345
Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527
| ||||| ||||||||||| ||||| ||||| |||||||| ||||||||| ||| ||
Sbjct 1006344 GCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGTTGGTCCGGAGGAATACC 1006285
Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587
|| ||||||||||| ||| || || | ||||| | | || || || |
Sbjct 1006284 CTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACCTCGAG 1006225
Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||||||||| || |||||||| || ||||| |||||
Sbjct 1006224 GGTGATCGTCTTGCCGGTGAGAGTCTTGACAAAGATTTG 1006186
Score = 118 bits (130), Expect = 2e-21
Identities = 159/219 (73%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAA-GT 199467
|| || | ||| || ||||| || || |||||| || | ||||||||| || || ||
Sbjct 1005947 CGGAGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTC-GCTAAGCGT 1005889
Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527
| ||||| ||||||||||| ||||| || || |||||||| || |||||| ||| ||
Sbjct 1005888 GCGCCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGATCCGGAGGAATACC 1005829
Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587
|| ||||||||||| ||| ||| || | ||||| | | ||| || || |
Sbjct 1005828 CTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCAATCGTGTCCGACGATTCGACCTCGAG 1005769
Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||||||||| || ||||| || || ||||| |||||
Sbjct 1005768 AGTGATCGTCTTGCCAGTGAGGGTCTTAACAAAGATTTG 1005730
Score = 109 bits (120), Expect = 1e-18
Identities = 157/219 (72%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAA-GT 199467
|| || | ||| || ||||| || || |||||| || | ||||||||| || || ||
Sbjct 1006175 CGGAGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTC-GCTAAGCGT 1006117
Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527
| ||||| ||||||||||| ||||| || || | |||||| || |||||| ||| ||
Sbjct 1006116 GCGCCCATCCTCCAGCTGCTTGCCGGCAAAAATCAAACGCTGTTGATCCGGAGGAATGCC 1006057
Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587
|| ||||| ||||| || ||| || | ||||| | | ||| || || |
Sbjct 1006056 CTCCTTGTCCTGGATCTTGGCTTTGACGTTGTCAATCGTGTCCGACGATTCGACTTCGAG 1005997
Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||||||||| || |||||||| || ||||| |||||
Sbjct 1005996 AGTGATCGTCTTGCCGGTGAGAGTCTTGACAAAGATTTG 1005958
Score = 98.7 bits (108), Expect = 2e-15
Identities = 135/189 (71%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 199438 CTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAA 199497
|||||| || | ||||||||| | || | ||||| ||||||||||| || || ||
Sbjct 1006602 CTCCTTCTGAATGTTGTAGTCGCTGAGCGTGCGACCATCCTCCAGCTGCTTGCCAGCAAA 1006543
Query 199498 GATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGA 199557
|| | |||||| ||||||||| ||| || || ||||| ||||| ||| |||
Sbjct 1006542 AATCAAACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 1006483
Query 199558 TTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCAC 199617
|| | ||||| | | ||| || || | ||||||||||| || ||||| || || ||
Sbjct 1006482 GTCAATCGTGTCCGACGATTCGACCTCGAGAGTGATCGTCTTGCCAGTGAGGGTCTTGAC 1006423
Query 199618 AAAAATTTG 199626
||| |||||
Sbjct 1006422 AAAGATTTG 1006414
>seq5
Length=679138
Score = 118 bits (130), Expect = 2e-21
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| || | ||| ||||||||||| || |||||| |||| ||||||||| || ||
Sbjct 231779 CGCAGGCGCAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTG 231838
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||| ||||||||||| ||||||||||| || ||||| ||||||||| || ||
Sbjct 231839 CGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGGATACCC 231898
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| ||||| |||||| |||| ||||| | | || || || |
Sbjct 231899 TCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCGAGG 231958
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||||||||| || || || || || || || | |||
Sbjct 231959 GTGATCGTCTTCCCGGTAAGGGTCTTGACGAACACTTG 231996
Score = 95.1 bits (104), Expect = 3e-14
Identities = 103/137 (75%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| || | |||||||||||| || || |||||| |||| ||||||||| || ||
Sbjct 141847 CGCAGACGCAGGACAAGGTGCAGCGTGCTCTCCTTCTGGATATTGTAGTCACTCAGGGTA 141788
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| |||||| ||||| ||||| || || ||||| || |||||||||||||| ||| ||
Sbjct 141787 CGTCCATCCTCCAGTTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGCGGAATGCCC 141728
Query 199529 TCTCGCTCCTGAATCTT 199545
|| ||||| |||||
Sbjct 141727 TCCTTGTCCTGGATCTT 141711
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178921479160536
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |