Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01-
09] 8 sequences; 7,757,162 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq1 147 2e-30
seq4 127 2e-24
seq5 122 1e-22
>seq1
Length=1515123
Score = 147 bits (162), Expect = 2e-30
Identities = 175/235 (74%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 46360 TTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTA 46419
||| | ||| || | | ||||| ||||| ||||| || |||||||| || || |||||
Sbjct 1006644 TTACTGGCCACCACGGAGACGCAGCACCAAGTGCAACGTGCTCTCCTTCTGAATGTTGTA 1006585
Query 46420 GTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479
|||| || ||||| | || || ||||||||||| || || ||||| ||||| |||||
Sbjct 1006584 GTCGCTGAGCGTGCGACCATCCTCCAGCTGCTTGCCAGCAAAAATCAAACGCTGTTGGTC 1006525
Query 46480 GGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCAC-CGTGTCGCTCG 46538
| || | || |||||||||| |||||| ||||| ||| | || |||||| ||
Sbjct 1006524 CGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCAATCGTGTCCGACG 1006466
Query 46539 ATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||| || || | ||||| || ||||| || || || || ||||||||||||||
Sbjct 1006465 ATTCGACCTCGAGAGTGATCGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1006411
Score = 145 bits (160), Expect = 9e-30
Identities = 164/217 (76%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
||||| |||||| |||| || |||||||| || || ||||||||| || |||||| |
Sbjct 1006170 ACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTAAGCGTGCGCCC 1006111
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
|| || |||||||||||||| || ||||| ||||| || || | || | || ||||||
Sbjct 1006110 ATCCTCCAGCTGCTTGCCGGCAAAAATCAAACGCTGTTGATCCGGAGGAATGCCCTCCTT 1006051
Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCAC-CGTGTCGCTCGATTCCACATCCACCGTGA 46556
|||| |||||| |||| ||| | || |||||| |||||| || || | ||||
Sbjct 1006050 GTCCTGGATCTTGGCTTTGA-CGTTGTCAATCGTGTCCGACGATTCGACTTCGAGAGTGA 1005992
Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
| || ||||| || || || || ||||||||||||||
Sbjct 1005991 TCGTCTTGCCGGTGAGAGTCTTGACAAAGATTTGCAT 1005955
Score = 143 bits (158), Expect = 3e-29
Identities = 166/221 (75%), Gaps = 2/221 (1%)
Strand=Plus/Minus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
||||| |||||| |||| || |||||||| || || ||||||||| || |||||| |
Sbjct 1005942 ACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTAAGCGTGCGCCC 1005883
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
|| || |||||||||||||| || |||| ||||| || || | || | | ||||||
Sbjct 1005882 ATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGATCCGGAGGAATACCCTCCTT 1005823
Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCAC-CGTGTCGCTCGATTCCACATCCACCGTGA 46556
|||| ||||| ||||| ||| | || |||||| |||||| || || | ||||
Sbjct 1005822 GTCCTGAATCTTGGCCTTGA-CGTTGTCAATCGTGTCCGACGATTCGACCTCGAGAGTGA 1005764
Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597
| || ||||| || || || |||||||||||||||||| ||
Sbjct 1005763 TCGTCTTGCCAGTGAGGGTCTTAACAAAGATTTGCATTGTG 1005723
Score = 129 bits (142), Expect = 7e-25
Identities = 158/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
||||| |||||| |||| || |||||||| || || ||||||||| || ||||| |
Sbjct 1006398 ACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTAAGCGTGCGGCC 1006339
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
|| || |||||||||||||| || |||| ||||| ||||| | || | | ||||||
Sbjct 1006338 ATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGTTGGTCCGGAGGAATACCCTCCTT 1006279
Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557
|||| ||||| ||||| | | | |||||| ||| || || || | |||||
Sbjct 1006278 GTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGAT 1006219
Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| ||||| || || || || ||||||||||||||
Sbjct 1006218 CGTCTTGCCGGTGAGAGTCTTGACAAAGATTTGCAT 1006183
>seq4
Length=1215465
Score = 127 bits (140), Expect = 2e-24
Identities = 154/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443
||| || |||| || |||||||| || || ||||||||| || ||||| |||| ||
Sbjct 412022 CACAAGGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCGTCCTC 411963
Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503
||||||||| || ||||| |||| ||||| ||||| | || | || ||||||||||
Sbjct 411962 GAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTG 411903
Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563
|||||| ||||| | | | |||||| ||| || || || | || || || ||
Sbjct 411902 GATCTTGGCCTTGACATTGTCGATCGTGTCCGACGACTCGACCTCAAGGGTAATCGTCTT 411843
Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||| ||||| || || || |||||||||||
Sbjct 411842 GCCAGTCAGAGTCTTGACGAAGATTTGCAT 411813
>seq5
Length=679138
Score = 122 bits (134), Expect = 1e-22
Identities = 156/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438
|||| ||| || || | || |||||||| ||||| ||||||||| || ||||| |
Sbjct 231785 CGCAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGACCA 231844
Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498
|| || ||||||||||||||||| |||| |||||| ||||| | || | | |||||||
Sbjct 231845 TCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGGATACCCTCCTTG 231904
Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558
||| |||||| ||| | || | | ||||||| || ||||| || | |||||
Sbjct 231905 TCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATC 231964
Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || || || || || || || || | ||||||
Sbjct 231965 GTCTTCCCGGTAAGGGTCTTGACGAACACTTGCAT 231999
Score = 111 bits (122), Expect = 2e-19
Identities = 114/148 (77%), Gaps = 2/148 (1%)
Strand=Plus/Minus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
||||| || || |||| || |||||||| |||||||||||||| || || || |
Sbjct 141842 ACGCAGGACAAGGTGCAGCGTGCTCTCCTTCTGGATATTGTAGTCACTCAGGGTACGTCC 141783
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
|| || || |||||||| || || |||| |||||||||||| | ||| | || ||||||
Sbjct 141782 ATCCTCCAGTTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGCGGAATGCCCTCCTT 141723
Query 46498 GTCCATGATCTTCTTCTTGA--GCGTCG 46523
|||| ||||||| |||||| ||||||
Sbjct 141722 GTCCTGGATCTTCGTCTTGACTGCGTCG 141695
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565238343476160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |