Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01- 09] 8 sequences; 7,757,162 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq1 147 2e-30 seq4 127 2e-24 seq5 122 1e-22 >seq1 Length=1515123 Score = 147 bits (162), Expect = 2e-30 Identities = 175/235 (74%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 46360 TTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTA 46419 ||| | ||| || | | ||||| ||||| ||||| || |||||||| || || ||||| Sbjct 1006644 TTACTGGCCACCACGGAGACGCAGCACCAAGTGCAACGTGCTCTCCTTCTGAATGTTGTA 1006585 Query 46420 GTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479 |||| || ||||| | || || ||||||||||| || || ||||| ||||| ||||| Sbjct 1006584 GTCGCTGAGCGTGCGACCATCCTCCAGCTGCTTGCCAGCAAAAATCAAACGCTGTTGGTC 1006525 Query 46480 GGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCAC-CGTGTCGCTCG 46538 | || | || |||||||||| |||||| ||||| ||| | || |||||| || Sbjct 1006524 CGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCAATCGTGTCCGACG 1006466 Query 46539 ATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| || || | ||||| || ||||| || || || || |||||||||||||| Sbjct 1006465 ATTCGACCTCGAGAGTGATCGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1006411 Score = 145 bits (160), Expect = 9e-30 Identities = 164/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||| |||||| |||| || |||||||| || || ||||||||| || |||||| | Sbjct 1006170 ACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTAAGCGTGCGCCC 1006111 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || |||||||||||||| || ||||| ||||| || || | || | || |||||| Sbjct 1006110 ATCCTCCAGCTGCTTGCCGGCAAAAATCAAACGCTGTTGATCCGGAGGAATGCCCTCCTT 1006051 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCAC-CGTGTCGCTCGATTCCACATCCACCGTGA 46556 |||| |||||| |||| ||| | || |||||| |||||| || || | |||| Sbjct 1006050 GTCCTGGATCTTGGCTTTGA-CGTTGTCAATCGTGTCCGACGATTCGACTTCGAGAGTGA 1005992 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || ||||| || || || || |||||||||||||| Sbjct 1005991 TCGTCTTGCCGGTGAGAGTCTTGACAAAGATTTGCAT 1005955 Score = 143 bits (158), Expect = 3e-29 Identities = 166/221 (75%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||| |||||| |||| || |||||||| || || ||||||||| || |||||| | Sbjct 1005942 ACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTAAGCGTGCGCCC 1005883 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || |||||||||||||| || |||| ||||| || || | || | | |||||| Sbjct 1005882 ATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGATCCGGAGGAATACCCTCCTT 1005823 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCAC-CGTGTCGCTCGATTCCACATCCACCGTGA 46556 |||| ||||| ||||| ||| | || |||||| |||||| || || | |||| Sbjct 1005822 GTCCTGAATCTTGGCCTTGA-CGTTGTCAATCGTGTCCGACGATTCGACCTCGAGAGTGA 1005764 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597 | || ||||| || || || |||||||||||||||||| || Sbjct 1005763 TCGTCTTGCCAGTGAGGGTCTTAACAAAGATTTGCATTGTG 1005723 Score = 129 bits (142), Expect = 7e-25 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||| |||||| |||| || |||||||| || || ||||||||| || ||||| | Sbjct 1006398 ACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTAAGCGTGCGGCC 1006339 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || |||||||||||||| || |||| ||||| ||||| | || | | |||||| Sbjct 1006338 ATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGTTGGTCCGGAGGAATACCCTCCTT 1006279 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 |||| ||||| ||||| | | | |||||| ||| || || || | ||||| Sbjct 1006278 GTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGAT 1006219 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || ||||| || || || || |||||||||||||| Sbjct 1006218 CGTCTTGCCGGTGAGAGTCTTGACAAAGATTTGCAT 1006183 >seq4 Length=1215465 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||| || |||| || |||||||| || || ||||||||| || ||||| |||| || Sbjct 412022 CACAAGGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCGTCCTC 411963 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||| || ||||| |||| ||||| ||||| | || | || |||||||||| Sbjct 411962 GAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTG 411903 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 |||||| ||||| | | | |||||| ||| || || || | || || || || Sbjct 411902 GATCTTGGCCTTGACATTGTCGATCGTGTCCGACGACTCGACCTCAAGGGTAATCGTCTT 411843 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| ||||| || || || ||||||||||| Sbjct 411842 GCCAGTCAGAGTCTTGACGAAGATTTGCAT 411813 >seq5 Length=679138 Score = 122 bits (134), Expect = 1e-22 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| ||| || || | || |||||||| ||||| ||||||||| || ||||| | Sbjct 231785 CGCAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGACCA 231844 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || || ||||||||||||||||| |||| |||||| ||||| | || | | ||||||| Sbjct 231845 TCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGGATACCCTCCTTG 231904 Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558 ||| |||||| ||| | || | | ||||||| || ||||| || | ||||| Sbjct 231905 TCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATC 231964 Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || || || || || || | |||||| Sbjct 231965 GTCTTCCCGGTAAGGGTCTTGACGAACACTTGCAT 231999 Score = 111 bits (122), Expect = 2e-19 Identities = 114/148 (77%), Gaps = 2/148 (1%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||| || || |||| || |||||||| |||||||||||||| || || || | Sbjct 141842 ACGCAGGACAAGGTGCAGCGTGCTCTCCTTCTGGATATTGTAGTCACTCAGGGTACGTCC 141783 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || || |||||||| || || |||| |||||||||||| | ||| | || |||||| Sbjct 141782 ATCCTCCAGTTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGCGGAATGCCCTCCTT 141723 Query 46498 GTCCATGATCTTCTTCTTGA--GCGTCG 46523 |||| ||||||| |||||| |||||| Sbjct 141722 GTCCTGGATCTTCGTCTTGACTGCGTCG 141695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565238343476160