Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01- 09] 8 sequences; 7,757,162 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq8 426 2e-114 seq1 141 9e-29 seq5 122 9e-23 seq4 107 2e-18 >seq8 Length=447081 Score = 426 bits (472), Expect = 2e-114 Identities = 596/824 (72%), Gaps = 19/824 (2%) Strand=Plus/Plus Query 132627 CTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGC 132686 ||| ||||| || | || |||| | || ||| | |||||| || |||||||| | Sbjct 45003 CTCGAAAAAGTTCGACTTGCCCTGGAGCGAGATGTTCTCCATAAAGTCGAAGGGGTTCGT 45062 Query 132687 TGTGTTGTAGTGCTTGG---TGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTC 132743 | |||||||||||| | |||||| ||| ||||||||| | ||| ||||| ||||| Sbjct 45063 CGAGTTGTAGTGCTTCGGGTTGCCGA---GGTTGACGAGCAGACGGTCCGCCACAAACTC 45119 Query 132744 GATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACGCACCGGCAGCGCTTCGG 132802 |||||| || ||||| | ||| | | | || | ||| || |||| || |||| Sbjct 45120 GATGTACTGGCACATGAGGCGCGCGTTCATG-CCGATCAGCGAAACAGGCAAGGCGTCGG 45178 Query 132803 TGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGC 132862 | | |||| ||||| ||||| || || ||||||| ||| | || || | | | Sbjct 45179 TCAAAAAGTCCTGCTCAATGGCCACAGCCTCGGTGATGATGCGGTTCAC-CGTGTCAGGG 45237 Query 132863 TCGGC-CGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCG 132921 | || || | | || || |||||| | || ||||||||| |||| ||||||| Sbjct 45238 TGCGCACGCTTCTTCAGGTGGCTGAACAGGAGACAGGCAAAGTCGGTGTGCAGGCCCTCG 45297 Query 132922 TCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGC 132981 || | || ||||| ||||| ||| | || || |||||||||||||| || |||||| Sbjct 45298 TCGCGCGAGATGAGCTCGTTCGAGAACGACAGACCAGGCATGAGGCCGCGCTTCTTGAGC 45357 Query 132982 CAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACC 133041 || || |||| ||| || |||||| || |||| |||||||||||| || || ||||| Sbjct 45358 CAGAAGATGGAGGCAAACGAGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGGCCACA 45417 Query 133042 AGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTT 133101 |||||||| ||||| ||| || | |||||||||||| ||||| |||||||| Sbjct 45418 AGGCGCTCCGAGAACGAGGCGCGCCTGTCCGAGATCCAGCGCAGGGCCCACTCGGCCTTC 45477 Query 133102 TCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACA--AACGGAGTTTCTCTTCCGAGG 133159 | |||||| || ||||| ||||| ||||| || | ||| | || |||| Sbjct 45478 TGCTTGACGACGGGAATCGTCTCGATAGCGTTGAAGAGGAACTCA--CGCTGCTCCGGCT 45535 Query 133160 AACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGA 133219 || | ||| |||||||||||| ||| ||| | |||||||| | ||||||||| || Sbjct 45536 CGCGGATGTACGTGTCGATGAGGAGCGAGTACGTCTCCGAGTGGATGTTCTCCATCATGA 45595 Query 133220 TTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGC-GAAACGCTCG 133278 | || |||||||| ||||| || |||||| | ||||||| || | || ||| |||||| Sbjct 45596 TCTGGAAGCCGTAGAAGCAGCGGGCCTCGGCGGCCTGCACCTC-GGCGCTGAAGCGCTCG 45654 Query 133279 ACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATG 133338 ||||| || ||||||||||| ||||| || || || |||||||| ||||| | | Sbjct 45655 ACCAGGTTCTCGTTGACGATACCGTCCGAAGCAGCAAAGAAGGCCAGGACGTGGCTCACA 45714 Query 133339 AAATGGCGCTCGTTGTCGTTCAAGC---GCTCCCAGTCGCGCGTGTCCTTGGACAGGTCC 133395 || |||||||| |||||||||| || | ||||||||| || |||||| || |||||| Sbjct 45715 AAGTGGCGCTCATTGTCGTTCATGCGGTGGTCCCAGTCGTGCAGGTCCTTCGAGAGGTCC 45774 Query 133396 ACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 | ||||||| ||||||| ||||| |||||||| || |||||||| Sbjct 45775 ATCTCCTCGGCGGTCCAGAACGAGGCCTCGGCCTTCTTGTACAT 45818 >seq1 Length=1515123 Score = 141 bits (156), Expect = 9e-29 Identities = 173/231 (75%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || ||||| ||||| || ||||| |||| ||||| | | Sbjct 1006411 ATGCAAATCTTTGTCAAGACCCTCACTGGCAAGACGATCACTCTCGAGGTCGAATCGTCG 1006470 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | || |||| | || | || |||| ||||| ||||| ||||| | ||||| Sbjct 1006471 GACACGATTGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCA 1006529 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| | |||| || ||||| |||||||| || | ||||| |||| ||||||||| Sbjct 1006530 ACAGCGTTTGATTTTTGCTGGCAAGCAGCTGGAGGATGGTCGCACGCTCAGCGACTACAA 1006589 Query 38423 CATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 ||| || ||||| ||| ||| |||| |||||||||||| | | || |||| Sbjct 1006590 CATTCAGAAGGAGAGC-ACGTTGCACTTGGTGCTGCGTCTCCGTGGTGGCC 1006639 Score = 140 bits (154), Expect = 3e-28 Identities = 165/218 (76%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || ||||| ||||| || ||||| |||| ||||| | | Sbjct 1005955 ATGCAAATCTTTGTCAAGACTCTCACCGGCAAGACGATCACTCTCGAAGTCGAATCGTCG 1006014 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | || |||| | |||| || |||| ||||| ||||| ||||| | || || Sbjct 1006015 GACACGATTGACAACG-TCAAAGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGATCA 1006073 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| | |||| || ||||| |||||||| || | |||||| || | ||||||||| Sbjct 1006074 ACAGCGTTTGATTTTTGCCGGCAAGCAGCTGGAGGATGGGCGCACGCTTAGCGACTACAA 1006133 Query 38423 CATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGT 38459 ||| || ||||| ||| |||||||| ||||||||||| Sbjct 1006134 CATTCAGAAGGAGAGC-ACGCTGCACCTGGTGCTGCGT 1006170 Score = 138 bits (152), Expect = 1e-27 Identities = 165/219 (75%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 ||||||||| || || || || ||||| ||||| || ||||| |||| ||||| | | Sbjct 1005726 AATGCAAATCTTTGTTAAGACCCTCACTGGCAAGACGATCACTCTCGAGGTCGAATCGTC 1005785 Query 38303 CGACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | || |||| | || | || || | ||||| ||||| ||||| | || | Sbjct 1005786 GGACACGATTGACAACG-TCAAGGCCAAGATTCAGGACAAGGAGGGTATTCCTCCGGATC 1005844 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||||| || |||| || ||||| |||||||| || | |||||| || | |||||||| Sbjct 1005845 AACAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGGCGCACGCTTAGCGACTACA 1005904 Query 38422 ACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGT 38459 |||| || ||||| ||| |||||||| ||||||||||| Sbjct 1005905 ACATTCAGAAGGAGAGC-ACGCTGCACCTGGTGCTGCGT 1005942 Score = 136 bits (150), Expect = 4e-27 Identities = 164/218 (75%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || ||||| ||||| || |||||| |||| |||||| | | Sbjct 1006183 ATGCAAATCTTTGTCAAGACTCTCACCGGCAAGACGATCACCCTCGAGGTCGAGTCGTCG 1006242 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | || || | | || | || || | ||||| ||||| ||||| | ||||| Sbjct 1006243 GACACGATTGACAATG-TCAAGGCCAAGATTCAGGACAAGGAGGGTATTCCTCCGGACCA 1006301 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| || || | || ||||| |||||||| || | ||||| || | ||||||||| Sbjct 1006302 ACAGCGTCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTTAGCGACTACAA 1006361 Query 38423 CATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGT 38459 ||| || ||||| ||| |||||||| ||||||||||| Sbjct 1006362 CATTCAGAAGGAGAGC-ACGCTGCACCTGGTGCTGCGT 1006398 >seq5 Length=679138 Score = 122 bits (134), Expect = 9e-23 Identities = 158/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||| | ||||| || || || || || || || |||||| |||| || ||| | || Sbjct 231999 ATGCAAGTGTTCGTCAAGACCCTTACCGGGAAGACGATCACCCTCGAGGTGGAGTCTTCC 231940 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | || |||| ||||| ||||| || || | |||||| Sbjct 231939 GACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAA 231880 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| ||||| |||||||| || | ||||| || | |||||||||| Sbjct 231879 CAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACGCTGAGCGACTACAAC 231820 Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCG 38458 ||||| ||||| ||| ||||| || | |||||||| Sbjct 231819 ATCCAGAAGGAGAGC-ACGCTCCACCTTGTGCTGCG 231785 >seq4 Length=1215465 Score = 107 bits (118), Expect = 2e-18 Identities = 155/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || ||||| || || ||| | || |||||| | | Sbjct 411813 ATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATTACCCTTGAGGTCGAGTCGTCG 411872 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | || |||| ||||| ||||| || || | |||||| Sbjct 411873 GACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAA 411932 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| || || ||||| || |||| ||||| || | |||||||||| Sbjct 411933 CAGCGTCTGATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTGAGCGACTACAAC 411992 Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCG 38458 || || ||||| ||| || ||||| | ||||| || Sbjct 411993 ATTCAGAAGGAGAGC-ACCCTGCACCTTGTGCTTCG 412027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172749982720