Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01- 09] 8 sequences; 7,757,162 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq1 113 3e-20 >seq1 Length=1515123 Score = 113 bits (124), Expect = 3e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||||| || ||||||||||| ||||| ||| | || |||| ||| Sbjct 1006391 ACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTAAGCGTGCGGCCATCCTCC 1006332 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || |||||||| || || || || ||||| | || | ||||||||||| | Sbjct 1006331 AGCTGCTTGCCGGCAAAGATCAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGA 1006272 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| ||||| | |||| || | ||| || |||| ||| || || || Sbjct 1006271 ATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTTG 1006212 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || ||||||||||| |||||||| |||||| Sbjct 1006211 CCGGTGAGAGTCTTGACAAAGATTTGCATA 1006182 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||||| || ||||||||||| ||||| ||| | || |||| ||| Sbjct 1006163 ACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTAAGCGTGCGCCCATCCTCC 1006104 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || |||||||| || | || || || || | || | ||||||||||| Sbjct 1006103 AGCTGCTTGCCGGCAAAAATCAAACGCTGTTGATCCGGAGGAATGCCCTCCTTGTCCTGG 1006044 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| ||||||| | |||| || | || || |||| || || || || Sbjct 1006043 ATCTTGGCTTTGACGTTGTCAATCGTGTCCGACGATTCGACTTCGAGAGTGATCGTCTTG 1005984 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || ||||||||||| |||||||| |||||| Sbjct 1005983 CCGGTGAGAGTCTTGACAAAGATTTGCATA 1005954 Score = 98.7 bits (108), Expect = 6e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||||| || ||||||||||| ||||| ||| | || |||| ||| Sbjct 1005935 ACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTAAGCGTGCGCCCATCCTCC 1005876 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || |||||||| || || || || || || | || | ||||||||||| | Sbjct 1005875 AGCTGCTTGCCGGCAAAAATCAGACGCTGTTGATCCGGAGGAATACCCTCCTTGTCCTGA 1005816 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | |||| || | || || |||| || || || || Sbjct 1005815 ATCTTGGCCTTGACGTTGTCAATCGTGTCCGACGATTCGACCTCGAGAGTGATCGTCTTG 1005756 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || ||||| ||||| |||||||| ||||| Sbjct 1005755 CCAGTGAGGGTCTTAACAAAGATTTGCAT 1005727 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||||| || ||||||||||| ||||| || | || |||| ||| Sbjct 1006619 ACCAAGTGCAACGTGCTCTCCTTCTGAATGTTGTAGTCGCTGAGCGTGCGACCATCCTCC 1006560 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || ||||| || | || || ||||| | || | ||||||||||| Sbjct 1006559 AGCTGCTTGCCAGCAAAAATCAAACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 1006500 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | |||| || | || || |||| || || || || Sbjct 1006499 ATCTTGGCCTTGACGTTGTCAATCGTGTCCGACGATTCGACCTCGAGAGTGATCGTCTTG 1006440 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || ||||| ||||| |||||||| |||||| Sbjct 1006439 CCAGTGAGGGTCTTGACAAAGATTTGCATA 1006410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633568348224