Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01-
09] 8 sequences; 7,757,162 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq4 107 2e-18
seq1 84.2 2e-11
>seq4
Length=1215465
Score = 107 bits (118), Expect = 2e-18
Identities = 267/401 (67%), Gaps = 6/401 (1%)
Strand=Plus/Minus
Query 29988 CACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGG 30047
|||| | ||||| || | | || || || ||||| |||||| | ||| || ||||
Sbjct 582954 CACGAAGAACTGGCAGAGAATATGACAAGGTGGAAGCGCCATGTTGTCCAGATCGATGGG 582895
Query 30048 GTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGC 30107
|||||| |||| || | ||||||| ||| |||||| || |||| | || | | |
Sbjct 582894 GTTCCATGCGCTCAGTAAAATGCGCCGGTCCGTTGGGTTCGTCTTGATTTGTTCGATGAC 582835
Query 30108 GTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATG-TCCGTGTACTCTG 30166
|| || ||||| || ||| ||| ||||| || ||| ||| |||| |
Sbjct 582834 GTGGGCGAGTTGATCGACACCCTGACCCTGGTAGT-TGGTATCAGCATCCACATACTTCG 582776
Query 30167 CTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCT 30226
| || || || | ||| ||||| |||||||| || |||||||| || || | ||||
Sbjct 582775 CGCCAAAGTGGCGCCATTGGAAGCCGTACACTGGACCCAGGTCACCTTCACGGCGGTGCC 582716
Query 30227 CGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCT 30286
| | || | ||| | || ||| || ||||||| ||| | |||||||| | ||| |
Sbjct 582715 CAAGTCCGCGCTTCTGCAGAAATTCGGTGGAACCATTGCCATCCCAGATGTGTACAT--T 582658
Query 30287 TC--TCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCAC 30344
|| || |||| || |||| ||| ||| | ||||||||||||||| ||||
Sbjct 582657 TCGTTCACTGAGCCACTTAGAGTCCGTGCGCCCGGCAATGAACCACAGCAGCTCTTCCAG 582598
Query 30345 GACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAA 30385
||| | ||||||| | ||| || || | |||||||
Sbjct 582597 CACGCCACGGTAAAAGACACGCTTCGTTGTCAAAAGGGGAA 582557
>seq1
Length=1515123
Score = 84.2 bits (92), Expect = 2e-11
Identities = 167/242 (69%), Gaps = 18/242 (7%)
Strand=Plus/Minus
Query 51963 GAGGGCTACCTGGACAGGGTGACTGTG---GACGTGGACTCTGACGGCAAGAAGCTCGTC 52019
||||||||| ||||| |||| | | ||| |||||| ||| ||| |||||||
Sbjct 879751 GAGGGCTACGTGGACCAGGTGCTTATCAGCGACACGGACTCGGACC---AGACGCTCGTC 879695
Query 52020 AAGGTGAGGCTGAGGACCCCCAGGCAC-----CCAGAGATGGGCGACAAGTTTGCGTCG- 52073
|||| | || | || |||| | | |||||| ||||||||||||| |||||
Sbjct 879694 AAGGCG---CTCAT--CCGCCAGACGCGGCGGCCAGAGCTGGGCGACAAGTTCTCGTCGC 879640
Query 52074 TTCACGGCGCAAAAGGGGACGTGCGGAGCCGTCCTGACCCAGGAGGACATGCCCTTCGAC 52133
|||||| |||||||| ||| || | || | ||||||||| |||| ||| |
Sbjct 879639 GCCACGGC-CAAAAGGGCGTGTGTGGTCTGATTGTGCCGCAGGAGGACCTGCCGTTCACC 879581
Query 52134 AAGGACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCATCCAGGATGACC 52193
| ||||| | |||||| ||||||| |||||||||| ||| || || | |||||
Sbjct 879580 GACGACGGTATCCACCCCGACATCATCATGAACCCCCACGGCTTCCCGTCGCGTATGACG 879521
Query 52194 GT 52195
||
Sbjct 879520 GT 879519
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408617560159784
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |