Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01-
09] 8 sequences; 7,757,162 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq1 114 1e-20
seq4 102 6e-17
seq5 84.2 2e-11
>seq1
Length=1515123
Score = 114 bits (126), Expect = 1e-20
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| |||| ||||| || ||||||||||| || ||||| ||||| || || | ||
Sbjct 1006400 AGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTAAGCGTGCGG 1006341
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
| || |||| |||||| |||||||| ||||| |||||||| |||| |||| ||||||
Sbjct 1006340 CCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGTTGGTCCGGAGGAATACCCTCC 1006281
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| |||||| || ||| | | | || |||| ||| ||||| | ||
Sbjct 1006280 TTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTG 1006221
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||||| || || || | ||| || ||||| || |||||
Sbjct 1006220 ATCGTCTTGCCGGTGAGAGTCTTGACAAAGATTTGCAT 1006183
Score = 107 bits (118), Expect = 1e-18
Identities = 157/222 (71%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| |||| ||||| || ||||||||||| || ||||| ||||| || || | ||
Sbjct 1005944 AGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTAAGCGTGCGC 1005885
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
| || |||| |||||| |||||||| ||||| ||||||||||||| |||| ||||||
Sbjct 1005884 CCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGATCCGGAGGAATACCCTCC 1005825
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| |||||| || || | | | || |||| || ||||| | ||
Sbjct 1005824 TTGTCCTGAATCTTGGCCTTGACGTTGTCAATCGTGTCCGACGATTCGACCTCGAGAGTG 1005765
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770
||||| || || || | || || ||||| || ||||| |||
Sbjct 1005764 ATCGTCTTGCCAGTGAGGGTCTTAACAAAGATTTGCATTGTG 1005723
Score = 105 bits (116), Expect = 5e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| |||| ||||| || ||||||||||| || ||||| ||||| || || | ||
Sbjct 1006172 AGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTAAGCGTGCGC 1006113
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
| || |||| |||||| |||||||| |||| ||||||||||||| |||| |||||||
Sbjct 1006112 CCATCCTCCAGCTGCTTGCCGGCAAAAATCAAACGCTGTTGATCCGGAGGAATGCCCTCC 1006053
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| ||||| ||| || | | | || |||| || || || | ||
Sbjct 1006052 TTGTCCTGGATCTTGGCTTTGACGTTGTCAATCGTGTCCGACGATTCGACTTCGAGAGTG 1005993
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||||| || || || | ||| || ||||| || |||||
Sbjct 1005992 ATCGTCTTGCCGGTGAGAGTCTTGACAAAGATTTGCAT 1005955
Score = 96.9 bits (106), Expect = 3e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| |||| |||||| || | ||||||||| || ||||| ||||| || || | |||
Sbjct 1006628 AGACGCAGCACCAAGTGCAACGTGCTCTCCTTCTGAATGTTGTAGTCGCTGAGCGTGCGA 1006569
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
| || |||| |||||| || ||||| |||| |||||||| |||| |||| |||||||
Sbjct 1006568 CCATCCTCCAGCTGCTTGCCAGCAAAAATCAAACGCTGTTGGTCCGGAGGAATGCCCTCC 1006509
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| ||||| || || | | | || |||| || ||||| | ||
Sbjct 1006508 TTGTCCTGGATCTTGGCCTTGACGTTGTCAATCGTGTCCGACGATTCGACCTCGAGAGTG 1006449
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||||| || || || | || || ||||| || |||||
Sbjct 1006448 ATCGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1006411
>seq4
Length=1215465
Score = 102 bits (112), Expect = 6e-17
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 48551 CCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATC 48610
||| | ||| | || || |||||||| || ||||| ||||| || || | ||| |
Sbjct 412028 CCGAAGCACAAGGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACC 411969
Query 48611 GTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTT 48670
||| || | ||||||||| || || ||||| |||||||| |||| || | |||||||||
Sbjct 411968 GTCCTCGAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTT 411909
Query 48671 GTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAAT 48730
||| ||||| || ||| | | | || |||| ||| ||||| | |||||
Sbjct 411908 GTCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCCGACGACTCGACCTCAAGGGTAAT 411849
Query 48731 CGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||| || || |||| ||| || || || || |||||
Sbjct 411848 CGTCTTGCCAGTCAGAGTCTTGACGAAGATTTGCAT 411813
>seq5
Length=679138
Score = 84.2 bits (92), Expect = 2e-11
Identities = 151/221 (68%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| |||| ||| | || ||||||||||| || || || ||||| || || | |||
Sbjct 231782 AGGCGCAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGA 231841
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
| || |||| |||||| ||||| || ||||| |||||||| |||| || | ||||||
Sbjct 231842 CCATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGGATACCCTCC 231901
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| ||||| || ||| | | | || || | ||||||||| | ||
Sbjct 231902 TTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCGAGGGTG 231961
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGT 48769
||||| || || || | || || || || | ||||| ||
Sbjct 231962 ATCGTCTTCCCGGTAAGGGTCTTGACGAACACTTGCATGGT 232002
Score = 82.4 bits (90), Expect = 6e-11
Identities = 84/110 (76%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623
|| ||||||||||| || || |||||||| ||| || | || | || |||| |||
Sbjct 141829 TGCAGCGTGCTCTCCTTCTGGATATTGTAGTCACTCAGGGTACGTCCATCCTCCAGTTGC 141770
Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673
|| || ||||| ||||| ||||| || |||| |||| ||||||||||||
Sbjct 141769 TTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGCGGAATGCCCTCCTTGTC 141720
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380937562858584
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |