Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01- 09] 8 sequences; 7,757,162 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq1 114 1e-20 seq4 102 6e-17 seq5 84.2 2e-11 >seq1 Length=1515123 Score = 114 bits (126), Expect = 1e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| ||||| || ||||||||||| || ||||| ||||| || || | || Sbjct 1006400 AGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTAAGCGTGCGG 1006341 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || |||| |||||| |||||||| ||||| |||||||| |||| |||| |||||| Sbjct 1006340 CCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGTTGGTCCGGAGGAATACCCTCC 1006281 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| |||||| || ||| | | | || |||| ||| ||||| | || Sbjct 1006280 TTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTG 1006221 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| || || || | ||| || ||||| || ||||| Sbjct 1006220 ATCGTCTTGCCGGTGAGAGTCTTGACAAAGATTTGCAT 1006183 Score = 107 bits (118), Expect = 1e-18 Identities = 157/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| ||||| || ||||||||||| || ||||| ||||| || || | || Sbjct 1005944 AGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTAAGCGTGCGC 1005885 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || |||| |||||| |||||||| ||||| ||||||||||||| |||| |||||| Sbjct 1005884 CCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGATCCGGAGGAATACCCTCC 1005825 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| |||||| || || | | | || |||| || ||||| | || Sbjct 1005824 TTGTCCTGAATCTTGGCCTTGACGTTGTCAATCGTGTCCGACGATTCGACCTCGAGAGTG 1005765 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770 ||||| || || || | || || ||||| || ||||| ||| Sbjct 1005764 ATCGTCTTGCCAGTGAGGGTCTTAACAAAGATTTGCATTGTG 1005723 Score = 105 bits (116), Expect = 5e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| ||||| || ||||||||||| || ||||| ||||| || || | || Sbjct 1006172 AGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTAAGCGTGCGC 1006113 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || |||| |||||| |||||||| |||| ||||||||||||| |||| ||||||| Sbjct 1006112 CCATCCTCCAGCTGCTTGCCGGCAAAAATCAAACGCTGTTGATCCGGAGGAATGCCCTCC 1006053 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| ||| || | | | || |||| || || || | || Sbjct 1006052 TTGTCCTGGATCTTGGCTTTGACGTTGTCAATCGTGTCCGACGATTCGACTTCGAGAGTG 1005993 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| || || || | ||| || ||||| || ||||| Sbjct 1005992 ATCGTCTTGCCGGTGAGAGTCTTGACAAAGATTTGCAT 1005955 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| |||||| || | ||||||||| || ||||| ||||| || || | ||| Sbjct 1006628 AGACGCAGCACCAAGTGCAACGTGCTCTCCTTCTGAATGTTGTAGTCGCTGAGCGTGCGA 1006569 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || |||| |||||| || ||||| |||| |||||||| |||| |||| ||||||| Sbjct 1006568 CCATCCTCCAGCTGCTTGCCAGCAAAAATCAAACGCTGTTGGTCCGGAGGAATGCCCTCC 1006509 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || || | | | || |||| || ||||| | || Sbjct 1006508 TTGTCCTGGATCTTGGCCTTGACGTTGTCAATCGTGTCCGACGATTCGACCTCGAGAGTG 1006449 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| || || || | || || ||||| || ||||| Sbjct 1006448 ATCGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1006411 >seq4 Length=1215465 Score = 102 bits (112), Expect = 6e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 48551 CCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATC 48610 ||| | ||| | || || |||||||| || ||||| ||||| || || | ||| | Sbjct 412028 CCGAAGCACAAGGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACC 411969 Query 48611 GTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTT 48670 ||| || | ||||||||| || || ||||| |||||||| |||| || | ||||||||| Sbjct 411968 GTCCTCGAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTT 411909 Query 48671 GTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAAT 48730 ||| ||||| || ||| | | | || |||| ||| ||||| | ||||| Sbjct 411908 GTCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCCGACGACTCGACCTCAAGGGTAAT 411849 Query 48731 CGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||| || || |||| ||| || || || || ||||| Sbjct 411848 CGTCTTGCCAGTCAGAGTCTTGACGAAGATTTGCAT 411813 >seq5 Length=679138 Score = 84.2 bits (92), Expect = 2e-11 Identities = 151/221 (68%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| ||| | || ||||||||||| || || || ||||| || || | ||| Sbjct 231782 AGGCGCAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGA 231841 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || |||| |||||| ||||| || ||||| |||||||| |||| || | |||||| Sbjct 231842 CCATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGGATACCCTCC 231901 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || ||| | | | || || | ||||||||| | || Sbjct 231902 TTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCGAGGGTG 231961 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGT 48769 ||||| || || || | || || || || | ||||| || Sbjct 231962 ATCGTCTTCCCGGTAAGGGTCTTGACGAACACTTGCATGGT 232002 Score = 82.4 bits (90), Expect = 6e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || ||||||||||| || || |||||||| ||| || | || | || |||| ||| Sbjct 141829 TGCAGCGTGCTCTCCTTCTGGATATTGTAGTCACTCAGGGTACGTCCATCCTCCAGTTGC 141770 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 || || ||||| ||||| ||||| || |||| |||| |||||||||||| Sbjct 141769 TTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGCGGAATGCCCTCCTTGTC 141720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380937562858584