Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01- 09] 8 sequences; 7,757,162 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq8 266 6e-66 >seq8 Length=447081 Score = 266 bits (294), Expect = 6e-66 Identities = 645/962 (67%), Gaps = 21/962 (2%) Strand=Plus/Minus Query 221714 GCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGG 221773 |||||||| ||||| || ||||||| | | |||| || ||||| || |||||| Sbjct 58109 GCCAGGTTGCACACAGCTGTCTCGTCCGGCGAGCTGTACTCGATAATCTCCGTGCAGAGG 58050 Query 221774 TTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTG 221833 || || |||||| || ||||||| || || ||| |||||| || || | ||||||| Sbjct 58049 TTCGAGCTCTTGATCGTGCCCAGGTTCTTCTGGTTACTCTTGCGGTTCGCCGAGTCCTTG 57990 Query 221834 TAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCT 221893 || || | ||| ||| ||| ||||| | || ||| | || || || ||| || | | Sbjct 57989 TACAGGACAAAAGGATTGCCCGTCTCAATTTGCGCCTCGAGGATAGCGTACCACAGCT-T 57931 Query 221894 CTG-GCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCAT 221952 ||| || | || | | |||| | |||||| || | | | || || ||||||| Sbjct 57930 CTGCGCCTTGACAGAGCGCTTGGCGCGGCCCTCGCGCTCGTACTTCTCG-TACAGAGCAT 57872 Query 221953 GTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACT 222012 |||||| || || || || |||| ||||| ||| |||||| |||||||| Sbjct 57871 --CAAACTCCTCGCCATAGCAGTCAGCCAGACCTGGGCACTCGGCGGGGCACATCAGCGA 57814 Query 222013 CCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAA 222072 ||||| ||| | || ||| | ||||||| || || || |||||||||||| | || Sbjct 57813 CCAGTCGCCGTTCTGTTCGACACGGCGCATGAACAGATCGGGAATCCACAGCGCCAGGAA 57754 Query 222073 GAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAA 222132 || || | | ||| |||||| ||| | ||| || | |||||| | ||| ||||| Sbjct 57753 CAGGTCGCGCGCGCGCACTTCCTCCTTGCCATGGTTCTTGCGCAGATCAATAAATTCAAA 57694 Query 222133 AATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACC 222192 || ||| | ||||||||||||||| |||| || | ||||| || ||||||||||| || Sbjct 57693 AACGTCCGAGTGCCACGGCTCCAGGTAGATCGCAAAGGCGCCCGGGCGCTTGTTGCCGCC 57634 Query 222193 CTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGA 222252 ||| ||||| | | || |||| | | ||| || | || || | |||||| Sbjct 57633 CTGGTCCACGTAGCGCGCCGTGTTGTTGTACACGCGGAGCATGGGCACAATACCGTTGCT 57574 Query 222253 TCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAG-ACATGC 222311 |||||| ||||| ||||||| || || | | ||| ||| | || | Sbjct 57573 CACACCGTTCGTGCCGGCGATGTACGAGCCCGTCGCACGAATGTT-GTGGATGTTCAGAC 57515 Query 222312 CGATACCACCGG-CGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCC 222370 | ||||| |||| ||| || | |||||| || ||| ||||||| ||||| || ||| Sbjct 57514 CAATACCGCCGGCCGTCTTGC-TGATCATCGCACAGGTCTTGAGCGTGTCGTATATACCC 57456 Query 222371 TCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAA 222430 || || ||||| ||||| | ||| || || || |||||||| || | |||| | Sbjct 57455 TCGATCGAGTCGTCCTTCATACTCACAAGGAAGCACGACGACATTTGGGGGTTGGGCGTG 57396 Query 222431 CAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCC--CCTAGACATCAGATCGT 222488 | ||| || ||||| || || |||||||||||| ||| | ||||| | || Sbjct 57395 CCGGCATTGAACAGGGTCGGCGACGCGTGTGTAAAG--GCCTTCTCGGACATGTAGTTGT 57338 Query 222489 ACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACA 222548 ||||||| | | || || | || || ||||| || | |||| | |||| || Sbjct 57337 ACGTCTCGATCGCGCTCGCCACGTCCTCGCCGTGGATGCCGACGGCGACGCGCATGAGCA 57278 Query 222549 TGTACTGGGGCCTCTCCACAGGAC----CCTTGGAGCTGGAGAGCAGGTACGATTTTTCC 222604 ||| |||||| | |||| || || || | || | | |||||||| || || Sbjct 57277 TGTGCTGGGGGCGCTCCGCA--ACCTTGCCATTGATCCG--CAGCAGGTAGGAGCGCTCG 57222 Query 222605 AGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCGGCGTCC 222664 || |||||||| |||||| ||||| || ||||| | ||| || ||| || | ||| Sbjct 57221 AGCGTCTTGAAGCCAAAGAAGTTGTAGTGGAAGTCGCGCTCGTAAATCACCGCCGAGTCG 57162 Query 222665 AG 222666 || Sbjct 57161 AG 57160 Score = 251 bits (278), Expect = 1e-61 Identities = 559/839 (67%), Gaps = 24/839 (3%) Strand=Plus/Minus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533 || || ||| |||||||||||||||| | ||| |||||||||||| ||||| || Sbjct 45830 GAGATCTGGCAGATGTACAAGAAGGCCGAGGCCTCGTTCTGGACCGCCGAGGAGATGGAC 45771 Query 25534 CTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGAC---GAGCAGCATTTTCTC 25590 || | |||||| || ||| |||| || | || ||| |||| || ||| | Sbjct 45770 CTCTCGAAGGACCTGCACGACTGGGACCACCGCATGAACGACAATGAGCGCCACTTTGTG 45711 Query 25591 AAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAG 25650 | |||| |||| |||||||| || || || ||||| || |||||||| ||| |||| Sbjct 45710 AGCCACGTCCTGGCCTTCTTTGCTGCTTCGGACGGTATCGTCAACGAGAACCTGGTCGAG 45651 Query 25651 AGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCC 25710 | |||| | || |||||| || |||||| || |||||||| |||||||| Sbjct 45650 CGCTTCAGCGCCGAGGTGCAGGCCGCCGAGGCCCGCTGCTTCTACGGCTTCCAGATCATG 45591 Query 25711 ATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGA- 25766 || || || | ||||| ||| ||| | ||| || || |||||||| || Sbjct 45590 ATGGAGAACATCCACTCGGAGACGTACTC---GCTCCTCATCGACACGTACATCCGCGAG 45534 Query 25767 -CGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGA 25825 || || | | ||| || || || || |||||| || ||| | ||||| || Sbjct 45533 CCGGAGCAGCGTGAGTTC--CTCTTCAACGCTATCGAGACGATTCCCGTCGTCAAGCAGA 45476 Query 25826 AGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGA-GCGCTACGTTTGGCGAGCGGCTG 25884 |||| ||||||| || |||||| | | ||| |||| |||| ||||| || Sbjct 45475 AGGCCGAGTGGGCCCTGCGCTGGATCT-CGGACAGGCGCGCCTCGTTCTCGGAGCGCCTT 45417 Query 25885 GTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGG 25944 || |||||||| || || ||||||||||||||| || |||||||| ||||||||||| Sbjct 45416 GTGGCCTTTGCCGCCGTCGAGGGCATCTTTTTCTCGGGCTCGTTTGCCTCCATCTTCTGG 45357 Query 25945 CTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGAC 26004 |||||| || || |||||| || |||| || || |||||||||||| | ||| Sbjct 45356 CTCAAGAAGCGCGGCCTCATGCCTGGTCTGTCGTTCTCGAACGAGCTCATCTCGCGCGAC 45297 Query 26005 GAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCT 26064 ||||| || |||| || |||||||| || || | || ||||| || | || | | Sbjct 45296 GAGGGCCTGCACACCGACTTTGCCTGTCTCCTGTTCA---GCCAC---CTGAAGAAGCGT 45243 Query 26065 TCTCA---AGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTT 26121 | || || || || || | ||||||| |||||||||| || ||| |||| ||| Sbjct 45242 GCGCACCCTGACACGGTGAACCGCATCATCACCGAGGCTGTGGCCATTGAGCAGGACTTT 45183 Query 26122 CNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATAC 26181 | ||||||||| | |||||| |||| ||| Sbjct 45182 TTGACCGACGCCTTGCCTGTTTCGCTGATCGGCATGAACGCGCGCCTCATGTGCCAGTAC 45123 Query 26182 ATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTACAGTACG 26241 || |||| |||||| |||| |||||| | | || || | | | | ||||| || Sbjct 45122 ATCGAGTTTGTGGCGGACCGTCTGCTCGTCAACCTCGGCAACCCGAAGCACTACAACTCG 45063 Query 26242 CCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGA 26300 | ||||| |||||||||||||| ||||| ||| | | || ||| | ||||| || || Sbjct 45062 ACGAACCCCTTCGACTTTATGGAGAACATCTCGCTCCAGGGCAAGTCGAACTTTTTCGA 45004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844707115520