Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01-
09] 8 sequences; 7,757,162 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq1 102 1e-16
>seq1
Length=1515123
Score = 102 bits (112), Expect = 1e-16
Identities = 164/236 (69%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184
|||| |||||||| | | || || ||||| |||| || ||| || ||| ||
Sbjct 1006190 ATTTGCATACCACCACGGAGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTG 1006131
Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244
|||||| | ||| | ||| || | || || ||||||||||| || | |||||||
Sbjct 1006130 TAGTCGCTAAGCGTGCGCCCATCCTCCAGCTGCTTGCCGGCAAAAATCAAACGCTGTTGA 1006071
Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304
|| ||||| || || || || || || || |||| ||| | || ||| || || ||
Sbjct 1006070 TCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCTTTGACGTTGTCAATCGTGTCCGAC 1006011
Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || ||||| ||||| || || || || || || || || ||||| ||||||||
Sbjct 1006010 GATTCGACTTCGAGAGTGATCGTCTTGCCGGTGAGAGTCTTGACAAAGATTTGCAT 1005955
Score = 89.7 bits (98), Expect = 9e-13
Identities = 162/237 (68%), Gaps = 0/237 (0%)
Strand=Plus/Minus
Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184
|||| |||||||| | | || || ||||| |||| || ||| || ||| ||
Sbjct 1005962 ATTTGCATACCACCACGGAGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTG 1005903
Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244
|||||| | ||| | ||| || | || || ||||||||||| | | |||||||
Sbjct 1005902 TAGTCGCTAAGCGTGCGCCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGA 1005843
Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304
|| ||||| || || || || || || || |||| || | || ||| || || ||
Sbjct 1005842 TCCGGAGGAATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCAATCGTGTCCGAC 1005783
Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361
|| || || || ||||| || || || || || || || || ||||| |||||||||
Sbjct 1005782 GATTCGACCTCGAGAGTGATCGTCTTGCCAGTGAGGGTCTTAACAAAGATTTGCATT 1005726
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899654310034560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |