Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01- 09] 8 sequences; 7,757,162 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq1 102 1e-16 >seq1 Length=1515123 Score = 102 bits (112), Expect = 1e-16 Identities = 164/236 (69%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| |||||||| | | || || ||||| |||| || ||| || ||| || Sbjct 1006190 ATTTGCATACCACCACGGAGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTG 1006131 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 |||||| | ||| | ||| || | || || ||||||||||| || | ||||||| Sbjct 1006130 TAGTCGCTAAGCGTGCGCCCATCCTCCAGCTGCTTGCCGGCAAAAATCAAACGCTGTTGA 1006071 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || ||||| || || || || || || || |||| ||| | || ||| || || || Sbjct 1006070 TCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCTTTGACGTTGTCAATCGTGTCCGAC 1006011 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||| ||||| || || || || || || || || ||||| |||||||| Sbjct 1006010 GATTCGACTTCGAGAGTGATCGTCTTGCCGGTGAGAGTCTTGACAAAGATTTGCAT 1005955 Score = 89.7 bits (98), Expect = 9e-13 Identities = 162/237 (68%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| |||||||| | | || || ||||| |||| || ||| || ||| || Sbjct 1005962 ATTTGCATACCACCACGGAGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTG 1005903 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 |||||| | ||| | ||| || | || || ||||||||||| | | ||||||| Sbjct 1005902 TAGTCGCTAAGCGTGCGCCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGA 1005843 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || ||||| || || || || || || || |||| || | || ||| || || || Sbjct 1005842 TCCGGAGGAATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCAATCGTGTCCGAC 1005783 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 || || || || ||||| || || || || || || || || ||||| ||||||||| Sbjct 1005782 GATTCGACCTCGAGAGTGATCGTCTTGCCAGTGAGGGTCTTAACAAAGATTTGCATT 1005726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899654310034560