Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01- 09] 8 sequences; 7,757,162 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq8 217 2e-50 seq4 141 1e-27 seq1 122 1e-21 seq3 109 7e-18 >seq8 Length=447081 Score = 217 bits (240), Expect = 2e-50 Identities = 281/390 (72%), Gaps = 15/390 (4%) Strand=Plus/Minus Query 1630062 GCACTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTT 1630121 || |||||| |||||||||||||||| ||| | ||||||||||||||||| | ||||| Sbjct 57636 GCCCTGGTCCACGTAGCGCGCCGTGTTGTTGTACACGCGGAGCATGGGCACAATACCGTT 57577 Query 1630122 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAA 1630181 | | | ||||| ||||| || | ||| | ||| | || || | ||||| | | Sbjct 57576 GCTCACACCGTTCGTGCCGGCGATGTACGAGCCCGTCGCACGAATGTTGTGGATGTTCAG 57517 Query 1630182 GCCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCC 1630241 || || |||||||||| |||| ||| | ||| || |||||||||||||| || || Sbjct 57516 ACCAATACCGCCGGCCGTCTTGCTGATCATCGCACAGGTCTTGAGCGTGTCGTATATACC 57457 Query 1630242 CTCGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGT 1630301 ||||||||||||| ||||||| ||| || ||||||||||| |||| |||| | ||| Sbjct 57456 CTCGATCGAGTCGTCCTTCATACTCACAAGGAAGCACGACGACATTTGGGGGTTGGGCGT 57397 Query 1630302 GCCGGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTA 1630361 |||||| ||||| || || |||| ||| || || || | |||||| || ||| Sbjct 57396 GCCGGCATTGAACAGGGTCGGCGACGCGTGTGTAAAGGCCTTCTCGGACATGTAGTTGTA 57337 Query 1630362 GGTGGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGC 1630421 || ||| | ||| ||||| ||||| || || | | ||||| ||| Sbjct 57336 CGTCTCGATCGCGCTCGCCA------CGTCCTCG---------CCGTGGATGCCGACGGC 57292 Query 1630422 GACGCGCATGAGCATGTACTGGGGCCGCTC 1630451 ||||||||||||||||| |||||| ||||| Sbjct 57291 GACGCGCATGAGCATGTGCTGGGGGCGCTC 57262 Score = 187 bits (206), Expect = 3e-41 Identities = 219/293 (75%), Gaps = 11/293 (4%) Strand=Plus/Plus Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690 |||||||||||||||| || ||||||||||||||| ||| | |||| || | | Sbjct 45572 CCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGCGGCCT 45631 Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750 | ||||| |||| || || ||||||||||| ||||| ||||| || || | Sbjct 45632 GCACCTCGGCGCTGAAGCGCTCGACCAGGTTCTCGTTGACGATACCGTCCGAAGCAGCAA 45691 Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCGACA--CCCAGT 869807 | || ||||||||||| | | |||||||||||| | |||| | | ||| |||||| Sbjct 45692 AGAAGGCCAGGACGTGGCTCACAAAGTGGCGCTCATTGTCGTTCATGCGGTGGTCCCAGT 45751 Query 869808 GGACGGTGTCGGCGCT----GAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCC 869863 | || || || |||||||| ||||||||||||||||| ||||||||||||| Sbjct 45752 CG----TGCAGGTCCTTCGAGAGGTCCATCTCCTCGGCGGTCCAGAACGAGGCCTCGGCC 45807 Query 869864 TTTTTGTACATCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCG 869916 || |||||||||| ||| | | ||||||||||| ||||||||||||||||| Sbjct 45808 TTCTTGTACATCTGCCAGATCTCGTGGTAGCGGATCGGGAAGAGGACAAAGCG 45860 Score = 179 bits (198), Expect = 5e-39 Identities = 185/242 (76%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 |||||||| || ||| | ||||| |||||||||||||| | |||||||| ||||||||| Sbjct 44977 GCCTTGGCATAGTCGGCAACGCGGCGCTCGAAAAAGTTCGACTTGCCCTGGAGCGAGATG 45036 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 |||||| | ||| ||||| | || ||||||||||| | ||||| || Sbjct 45037 TTCTCCATAAAGTCGAAGGGGTTCGTCGAGTTGTAGTGCTTCGGGTTGCCGAGGTTGACG 45096 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 ||||| ||||| || |||||||||||||||||||||||||||| |||||||||||||| Sbjct 45097 AGCAGACGGTCCGCCACAAACTCGATGTACTGGCACATGAGGCGCGCGTTCATGCCGATC 45156 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 |||| || |||| | ||| ||| ||| || | ||| || | || |||||| |||| Sbjct 45157 AGCGAAACAGGCAAGGCGTCGGTCAAAAAGTCCTGCTCAATGGCCACAGCCTCGGTGATG 45216 Query 868931 AT 868932 || Sbjct 45217 AT 45218 Score = 134 bits (148), Expect = 2e-25 Identities = 206/289 (71%), Gaps = 11/289 (4%) Strand=Plus/Plus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || |||||||| ||| | ||||| || | || || |||||||||||||||||| Sbjct 45292 CCCTCGTCGCGCGAGATGAGCTCGTTCGAGAACGACAGACCAGGCATGAGGCCGCGCTTC 45351 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 |||||||| ||||||| | || |||||||||||||||||||||||||||||||||| Sbjct 45352 TTGAGCCAGAAGATGGAGGCAAACGAGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 45411 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT---TGATCCACTTCATCGCC 869356 | | || ||||| | || |||||| | || ||| |||||| || ||| Sbjct 45412 GCCACAAGGCGCTCCGAGAA-----CGAGGCGCGCC-TGTCCGAGATCCAGCGCAGGGCC 45465 Query 869357 CAGTCGGCCTTTTTCCTCACCGAC-GGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTT 869415 || |||||||| | | | | |||| || | ||| ||||| ||| |||||| || Sbjct 45466 CACTCGGCCTTCTGCTTGA-CGACGGGAATCGTCTCGATAGCGTTGAAGAGGAACTCACG 45524 Query 869416 TTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTCC 869464 | |||| || || || |||||||| |||||||| || |||||| Sbjct 45525 CTGCTCCGGCTCGCGGATGTACGTGTCGATGAGGAGCGAGTACGTCTCC 45573 Score = 118 bits (130), Expect = 1e-20 Identities = 289/443 (65%), Gaps = 8/443 (2%) Strand=Plus/Minus Query 1628162 ACTGGACGATCTCGGTGCACAGGTTGGCCGACGTCGTCGTACCCAGGTTCTGCTGGTTGG 1628221 ||| || ||||| ||||| ||||| | | | |||| |||||||||| |||||| Sbjct 58072 ACTCGATAATCTCCGTGCAGAGGTTCGAGCTCTTGATCGTGCCCAGGTTCTTCTGGTTAC 58013 Query 1628222 TGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCCG 1628281 | | |||| | | |||||||| || | | || ||| ||||| || |||||| Sbjct 58012 TCTTGCGGTTCGCCGAGTCCTTGTACAGGACAAAAGGATTGCCCGTCTCAATTTGCGCCT 57953 Query 1628282 CGACGATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCCGC---GCGCGGCCCTNNN 1628338 ||| ||| || |||| | || |||| | ||||| ||| |||||||||| Sbjct 57952 CGAGGATAGCGTACCACAGCTTCTGCGC---CTTGACAGAGCGCTTGGCGCGGCCCTCGC 57896 Query 1628339 NNNNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGCG 1628398 ||||| || |||| ||||| || ||| || || Sbjct 57895 GCTCGTACTTCTCGTACAGAGCATCAAACTCCTCGCCATAGCAGTCAGCCAGACCTGGGC 57836 Query 1628399 CCTCGGACGGACAAAAGAGCGACCAGTCGCCAC-CGGTCACCGCGCGGCGCATAAAGAGG 1628457 ||||| || || | |||||||||||||| | || | | |||||||| || || Sbjct 57835 ACTCGGCGGGGCACATCAGCGACCAGTCGCCGTTCTGTT-CGACACGGCGCATGAACAGA 57777 Query 1628458 TCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTC 1628517 || ||||||| || || ||||||||||| || ||||||||||| |||||| Sbjct 57776 TCGGGAATCCACAGCGCCAGGAACAGGTCGCGCGCGCGCACTTCCTCCTTGCCATGGTTC 57717 Query 1628518 TTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAG 1628577 || || || | | || | || ||| | ||||||||||||||||||| |||||| Sbjct 57716 TTGCGCAGATCAATAAATTCAAAAACGTCCGAGTGCCACGGCTCCAGGTAGATCGCAAAG 57657 Query 1628578 GCGCCCTTGCGCTTGCCGCCGCC 1628600 |||||| ||||||| |||||| Sbjct 57656 GCGCCCGGGCGCTTGTTGCCGCC 57634 Score = 91.5 bits (100), Expect = 2e-12 Identities = 109/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 1627334 GGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGTTGGTGATGA 1627393 |||||||||| || || || | ||||| |||||| |||| |||||| | ||| Sbjct 58693 GGTTGACCACCTGGAACTCACCGGCAAGCACACGGCGCATGTAAATGTTGCTCGTGTACG 58634 Query 1627394 CCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCA 1627453 ||| | |||| || ||| |||||||| ||| | |||||| |||||| |||||| Sbjct 58633 GCTCAAAGCACTCGTTGAAGCCAAGGATCTGACTCGTGGAGGCCGTCGGCATGGGCGCCA 58574 Query 1627454 CGAGGAGCGAGTTGCGCAGGCCGTGCTG 1627481 || |||||||||||||| |||||||| Sbjct 58573 TCAGCAGCGAGTTGCGCAGACCGTGCTG 58546 >seq4 Length=1215465 Score = 141 bits (156), Expect = 1e-27 Identities = 343/509 (67%), Gaps = 19/509 (4%) Strand=Plus/Minus Query 1726679 AAGGTATGCGGCTGGGCGGCGGCGCGCACGGCGTCGAGTGCCGTCGCCAC-GCTCCCGTC 1726737 |||| |||||||| | | ||||| | || |||| || | ||||| || ||||| Sbjct 450550 AAGGCGTGCGGCTGCGACGACGCGCGGATCGCATCGACCGC-GACGCCAATGCCGCCGTC 450492 Query 1726738 GGTGCCGTTCTTGAAGCCGATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGCACCTG 1726797 || |||||||||||| || | ||||| ||| ||||| | | ||||||||||| ||| Sbjct 450491 CGTAGAGTTCTTGAAGCCAATCGGCAGCGACAGGCCCGACACAAGCTCGCGGTGCAGCTG 450432 Query 1726798 GCTCTCGGTCGTGCGCGCGCCCACGGCGCCCCACGCCACCAGGTCTGCCAAATAAGGGGC 1726857 ||||||||| |||||||| | ||||||||||| ||| || | || || ||| Sbjct 450431 CGACTCGGTCGTACGCGCGCCGATCGCGCCCCACGCGTACAGATCCGACAGGTACTGGGG 450372 Query 1726858 CACCAGAGGACTGAGAAACTCGACGGCCACGGGCTGATCGACGGCGACGACGAGATCGCG 1726917 | | | ||| | |||| ||||| ||| | | | || | | || Sbjct 450371 CGAGATCGTGTCGAGCACCTCGCACGCCACAGGCAGGCCAATCTCGTTAATG---TCAAT 450315 Query 1726918 CAACAGGCGGCGCGACGCCGT-CAGGCCGTCGGCCAGGCGGCACGACCCGTCGAGGTCGG 1726976 || ||| |||||| | || ||||||| | | || |||| |||||||||| | Sbjct 450314 CAGCAGCTGGCGCG-CAATGTGCAGGCCGCGGTTGATCTGGAACGAGCCGTCGAGGTTCG 450256 Query 1726977 GGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAGGCGCGC- 1727035 ||||| || ||| |||||||| |||||||||||||||||||| || | ||||| ||| Sbjct 450255 GGTCGTTGATCAGACCCTTCCAGCCGACGGTCGTGCGCGGCTTCTCAAAGTAGGCCCGCA 450196 Query 1727036 --ATGACCACGCAAAGCGCGT-CGCCGACCTCGTCTCGGACAAAGGCGC--GCAGGCGTC 1727090 |||||||| ||| | | | | | | || |||| | | | | |||||| | Sbjct 450195 TAATGACCAC---AAGACCATCCTTCCAGCGCGCCTCG---TATGCCTCCTTCAGGCGGC 450142 Query 1727091 GGCCATAGTCGACGACGGCCGCCGGGTCGTGCGCCGAACACGGACCAACGATAACCAGCA 1727150 | |||||||| ||||| | |||||||| ||| ||||| || || || ||||||| Sbjct 450141 GAGCATAGTCGCGCGCGGCCTCAGGGTCGTGGATCGAGCACGGGCCGACAATCACCAGCA 450082 Query 1727151 GCCGCCGGTCGGTCCCGTCGAGCACGCGC 1727179 | || ||| ||||| || ||| ||| Sbjct 450081 GGCGGTCGTCCTGCCCGTGGATCACACGC 450053 >seq1 Length=1515123 Score = 122 bits (134), Expect = 1e-21 Identities = 323/478 (68%), Gaps = 45/478 (9%) Strand=Plus/Minus Query 733076 GCGCCAGCCCGAGTTGGGCGACAAACTGTCGTCGCGCCACGGCCAAAAGGGC-ACCGTGG 733134 ||| | ||| ||| |||||||||| | |||||||||||||||||||||||| |||| Sbjct 879674 GCGGCGGCCAGAGCTGGGCGACAAGTTCTCGTCGCGCCACGGCCAAAAGGGCGTGTGTGG 879615 Query 733135 GCAGCGTGCGCTCCACCGAGGACATGCCCTGGTCGCCGCGCGGCGG-CGCCACGCCCGAC 733193 | | || || || |||||| |||| | || ||| || ||| |||| |||||| Sbjct 879614 TCTGATTGTGCCGCA-GGAGGACCTGCC--GTTCACCG-ACGACGGTATCCAC-CCCGAC 879560 Query 733194 ATCGTGATCAACCCGCACGCCATCCCGTCGCGCATGACCATGGGCAAGATGCTCGAGGCC 733253 ||| | || ||||| |||| | |||||||||| ||||| | ||||||||| ||||| Sbjct 879559 ATCATCATGAACCCCCACGGCTTCCCGTCGCGTATGACGGTCGGCAAGATGATCGAG--- 879503 Query 733254 CTCCTG---GGCAAGG-TGGCCTGCCGCGAGGGCTACATCGGCGACGGCACGCCCTTTGG 733309 || ||| ||||||| || || ||| |||| | |||||||| |||| || Sbjct 879502 CTGCTGGCCGGCAAGGCCGGTGTG-ATCGATGGCTCGCTGCAGTACGGCACGGCCTTCGG 879444 Query 733310 CGGCGTCACCNNNNNNNNNNNNNNNNNNGAGTTGGCCCGC-CACGGGTGCGAGC---GCT 733365 |||| || | || |||||||| | |||| ||| ||| Sbjct 879443 CGGC-TCGC-----------GCGTCGAGGATATGGCCCGCATCCTCGTGC-AGCACGGCT 879397 Query 733366 AC---------GGCAAGGAGGTGCTCTACCACCCGCAC-ACCGGCGAGCCCATGGCGGCG 733415 || ||||| ||| ||| || | | |||| ||||| || || | | |||| Sbjct 879396 ACAACTACGGTGGCAAAGAGTACCTC-ACGAGCGGCACGACCGGTGAACCGCTCGAGGCG 879338 Query 733416 TTGATCTTCTCGGCGCCGGTCTACTACCAGGCCCTCCGGCACGTGGCCATCGACAAGATC 733475 | | | || | ||| ||||||||||| ||| |||| ||| ||| |||||||| Sbjct 879337 TACGTGTACTTTGGCCCGATCTACTACCAGAAGCTCAAGCACATGGTCATGGACAAGATG 879278 Query 733476 CACGCGCGCCCGCGCGGTCC-CGTGCAGATGCTCACCAAGCAGCCGGTCGAGGGCCGC 733532 ||||||||| ||||||| || ||||| | ||||||| |||||| |||||| ||| Sbjct 879277 CACGCGCGCGCGCGCGGACCGCGTGCCG-TGCTCACGCGCCAGCCGACCGAGGGACGC 879221 Score = 96.9 bits (106), Expect = 4e-14 Identities = 163/236 (69%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 1574004 GGCGTCGACGTCGTGCGCAAGATCATCAAGCACCACGCCTCCAAGAGGATCGACCTGCCG 1574063 ||| ||||||| |||||||| | |||||| || |||| | | |||||| Sbjct 518965 GGCATCGACGTTGTGCGCAACAAGATCAAGGTGTTTGCGCAGAAGAAGGTGTCGCTGCCG 518906 Query 1574064 CCCGGACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAG 1574123 || || |||||| | ||||| ||||||||||| ||| || | ||| ||| || ||| Sbjct 518905 CCGAACCGGCACAAGATCATCATTCTCGACGAGGCGGACAGCATGACGCCGGGTGCGCAG 518846 Query 1574124 CAGGCCCTGCGGTCCACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTGGCGTGC 1574183 ||||| ||||| ||| ||||| | || | ||||||||||| | | |||||| Sbjct 518845 CAGGCGCTGCGTCGCACGATGGAGATCTACGCGCCAACGACGCGCTTCTGCTTTGCGTGC 518786 Query 1574184 AACACGTCGTCGATGGTCATCGAGGCCCTCCAAAGTCGCTGCGCCATTCTGCGCTT 1574239 ||| |||| | | |||| ||| | |||| || ||||| || ||||| || || Sbjct 518785 AACCAGTCGAACAAGATCATTGAGCCGATCCAGAGCCGCTGTGCGATTCTTCGGTT 518730 >seq3 Length=1365147 Score = 109 bits (120), Expect = 7e-18 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 1254350 CAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTT 1254409 ||| ||||| | | |||| || || || ||||||||||| |||| ||| ||| | Sbjct 505128 CAGCTCGCCAGGGAGAATCAAACGAACAGCCGTCTGGATCTCACGCGAAGAGATGGTGCT 505187 Query 1254410 GCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTT 1254469 |||||| || ||||| |||||||||| ||||||| |||| ||||| | Sbjct 505188 CTTCTTGTTGTAGCTGGCCAGCTTCGAGGCCTCGGTGGCGATGCGCTCGAAGATGTCCTG 505247 Query 1254470 GACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTG 1254529 || |||||||| | | | ||| | |||||| ||||| || ||||||||||||||| Sbjct 505248 CACGAACGAGTTGAGAATGGCCATGGCCTTGTTCGAGATACCAGTGTCGGGGTGCACCTG 505307 Query 1254530 CTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 |||||| || ||||||| | | |||||| Sbjct 505308 CTTGAGGACACGGTAGATGTAGGTCGAGTA 505337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107138543482536