Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01- 09] 8 sequences; 7,757,162 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq8 208 1e-47 seq4 129 9e-24 seq3 114 2e-19 seq1 107 3e-17 >seq8 Length=447081 Score = 208 bits (230), Expect = 1e-47 Identities = 280/390 (72%), Gaps = 15/390 (4%) Strand=Plus/Minus Query 2073537 GCACTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTT 2073596 || |||||| || ||||||||||||| ||| | ||||||||||||||||||| ||||| Sbjct 57636 GCCCTGGTCCACGTAGCGCGCCGTGTTGTTGTACACGCGGAGCATGGGCACAATACCGTT 57577 Query 2073597 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAA 2073656 | | | ||||| ||||| || | ||| | ||||| || || | ||||| | | Sbjct 57576 GCTCACACCGTTCGTGCCGGCGATGTACGAGCCCGTCGCACGAATGTTGTGGATGTTCAG 57517 Query 2073657 GCCGATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCC 2073716 || || |||||||||| |||| ||| | ||| || | || ||||| ||||| || || Sbjct 57516 ACCAATACCGCCGGCCGTCTTGCTGATCATCGCACAGGTCTTGAGCGTGTCGTATATACC 57457 Query 2073717 CTCGATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGT 2073776 ||||||||||||| ||||||| || || ||||||||||| |||| ||| | ||| Sbjct 57456 CTCGATCGAGTCGTCCTTCATACTCACAAGGAAGCACGACGACATTTGGGGGTTGGGCGT 57397 Query 2073777 GCCGGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTA 2073836 |||||||||||| || || |||| ||| || | | || | ||||||| | ||| Sbjct 57396 GCCGGCATTGAACAGGGTCGGCGACGCGTGTGTAAAGGCCTTCTCGGACATGTAGTTGTA 57337 Query 2073837 GGTGGCGAGCACGCGCGCCAGCGCGTCTTGGACGTCGGCAAACCCATAGTGGCCGATGGC 2073896 || ||| | ||| ||||| |||| | | ||| | || ||||| ||| Sbjct 57336 CGTCTCGATCGCGCTCGCCA---CGTCCTCGCCGTGG--------AT----GCCGACGGC 57292 Query 2073897 GACGCGCATGATCATGTACTGGGGTCGCTC 2073926 ||||||||||| ||||| |||||| ||||| Sbjct 57291 GACGCGCATGAGCATGTGCTGGGGGCGCTC 57262 Score = 190 bits (210), Expect = 3e-42 Identities = 242/328 (74%), Gaps = 5/328 (2%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || |||||||| ||| | ||||| || | || || |||||||||||||||||| Sbjct 45292 CCCTCGTCGCGCGAGATGAGCTCGTTCGAGAACGACAGACCAGGCATGAGGCCGCGCTTC 45351 Query 794401 TTGAGCCAAAAGATGGCACAGAAAC-TGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 |||||||| ||||||| | |||| ||||||||||||||||||||||||||||||||| Sbjct 45352 TTGAGCCAGAAGATGG-AGGCAAACGAGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 45410 Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCA 794519 | | || || ||||| | || | | | | ||| | | |||||| || ||||| Sbjct 45411 GGCCACAAGGCGCTCCGAGAACGAGGC--GCGCCTGTCCG-AGATCCAGCGCAGGGCCCA 45467 Query 794520 CTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTC 794579 ||| ||||| | | | || ||| | ||| ||||| ||| |||||| || || Sbjct 45468 CTCGGCCTTCTGCTTGACGACGGGAATCGTCTCGATAGCGTTGAAGAGGAACTCACGCTG 45527 Query 794580 GACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTC 794639 |||| || || ||| |||||||||||||||||||| ||||| ||||||||||| || Sbjct 45528 CTCCGGCTCGCGGATGTACGTGTCGATGAGGAGCGAGTACGTCTCCGAGTGGATGTTCTC 45587 Query 794640 GATGGCGATCTGGAAGCCATAAAAGCAG 794667 || |||||||||||| || |||||| Sbjct 45588 CATCATGATCTGGAAGCCGTAGAAGCAG 45615 Score = 174 bits (192), Expect = 2e-37 Identities = 201/268 (75%), Gaps = 6/268 (2%) Strand=Plus/Plus Query 793875 CTCTCCGTCCTCGATGTGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAG 793934 |||| |||||| | | |||||| ||||||||||| ||| | ||||| |||||||||||| Sbjct 44955 CTCTTCGTCCTTG--GCGACGCCGGCCTTGGCATAGTCGGCAACGCGGCGCTCGAAAAAG 45012 Query 793935 TTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAG 793994 || | |||||||| ||||||||| |||||| | ||| ||||| | || |||| Sbjct 45013 TTCGACTTGCCCTGGAGCGAGATGTTCTCCATAAAGTCGAAGGGGTTCGTCGAGTTGTAG 45072 Query 793995 TGCTTCTCGCACCCGAG--CGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGC 794052 |||||| | ||||| |||| ||||| ||||| || || || || |||||||||| Sbjct 45073 TGCTTCGGGTTGCCGAGGTTGACG--AGCAGACGGTCCGCCACAAACTCGATGTACTGGC 45130 Query 794053 ACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTT 794112 |||||||| |||||||||||||| |||| || |||| | ||| | | ||| || | Sbjct 45131 ACATGAGGCGCGCGTTCATGCCGATCAGCGAAACAGGCAAGGCGTCGGTCAAAAAGTCCT 45190 Query 794113 TCTCGATCTCGACGGCCTCGATGATGAT 794140 ||| || | || |||||| ||||||| Sbjct 45191 GCTCAATGGCCACAGCCTCGGTGATGAT 45218 Score = 150 bits (166), Expect = 3e-30 Identities = 202/279 (72%), Gaps = 3/279 (1%) Strand=Plus/Plus Query 796141 AAACACCTGGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCC 796200 || || | |||||||| | || ||||| ||||||| || |||||||||| Sbjct 45610 AAGCAGCGGGCCTCGGCGGCCTGCACCTCGGCGCTGAAGCGCTCGACCAGGTTCTCGTTG 45669 Query 796201 ACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCG 796260 ||||| ||||| || || || ||||| |||||||| | | |||||| ||||| | | Sbjct 45670 ACGATACCGTCCGAAGCAGCAAAGAAGGCCAGGACGTGGCTCACAAAGTGGCGCTCATTG 45729 Query 796261 TCGCTGA-GCGA--GACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTC 796317 ||| | | ||| | |||||| | | ||| |||||| | ||||||||||||| Sbjct 45730 TCGTTCATGCGGTGGTCCCAGTCGTGCAGGTCCTTCGAGAGGTCCATCTCCTCGGCGGTC 45789 Query 796318 CAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAAC 796377 || || |||||||||||||| |||||||||| ||| ||| ||||||||||| ||||| Sbjct 45790 CAGAACGAGGCCTCGGCCTTCTTGTACATCTGCCAGATCTCGTGGTAGCGGATCGGGAAG 45849 Query 796378 AGAACAAAGCGATTGGGGTTCTCGCGTAGCAGCGGCTCG 796416 || |||||||| |||||| |||||||||||| Sbjct 45850 AGGACAAAGCGCGACTTGTTCTCCTTCAGCAGCGGCTCG 45888 Score = 138 bits (152), Expect = 2e-26 Identities = 289/433 (67%), Gaps = 8/433 (2%) Strand=Plus/Minus Query 2071584 CTCGGTGCACAGGTTGGCCGACATCGTG---GTGCCCAGGTTCTGCTGGTTGCTGGTCAG 2071640 ||| ||||| ||||| ||| || || ||||||||||||| |||||| || | | Sbjct 58062 CTCCGTGCAGAGGTT---CGAGCTCTTGATCGTGCCCAGGTTCTTCTGGTTACTCTTGCG 58006 Query 2071641 GTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGCCGTGACGAT 2071700 ||| | | |||||||| ||| | | || |||||||| || |||||| || ||| Sbjct 58005 GTTCGCCGAGTCCTTGTACAGGACAAAAGGATTGCCCGTCTCAATTTGCGCCTCGAGGAT 57946 Query 2071701 GGCCGACCAAATTTGGCGCGCGGGCACCGAGGTCCTCGCGCGGCCCTNNNNNNNNNNNNN 2071760 || |||| | | |||| || ||| | | |||||||||| Sbjct 57945 AGCGTACCACAGCTTCTGCGCCTTGACAGAGCGCTTGGCGCGGCCCTCGCGCTCGTACTT 57886 Query 2071761 NNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGCGCCTCGGACGG 2071820 | || || ||||| | |||| | ||| || ||| || || ||||| || Sbjct 57885 CTCGTACAGAGCATCAAACTCCTCGCCATAGCAGTCAGCCAGACCTGGGCACTCGGCGGG 57826 Query 2071821 GCAAAAGAGCGACCAGTCGCCGC-CAGTCACCACGCGGCGCATAAACAGGTCGCACGTCC 2071879 ||| | ||||||||||||||| | || | || |||||||| ||||| ||| ||| Sbjct 57825 GCACATCAGCGACCAGTCGCCGTTCTGTT-CGACACGGCGCATGAACAGATCGGGAATCC 57767 Query 2071880 ACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAGGT 2071939 |||| | || || |||||||| || ||||||||||| |||||||| ||| | Sbjct 57766 ACAGCGCCAGGAACAGGTCGCGCGCGCGCACTTCCTCCTTGCCATGGTTCTTGCGCAGAT 57707 Query 2071940 CGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGC 2071999 | | | || | | ||| | ||||||||||||||||||| |||||||||||| || Sbjct 57706 CAATAAATTCAAAAACGTCCGAGTGCCACGGCTCCAGGTAGATCGCAAAGGCGCCCGGGC 57647 Query 2072000 GCTTGCCGCCGCC 2072012 ||||| |||||| Sbjct 57646 GCTTGTTGCCGCC 57634 Score = 100 bits (110), Expect = 5e-15 Identities = 141/193 (73%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 2070052 GCCGCATGGTAGATCGTCTCAAAGATGGTGC-GGTTGAGGCGACGCGCGCCGGCGCTCTC 2070110 ||||||||||| || ||||||||||| ||| || || | ||||| | ||| || Sbjct 58394 GCCGCATGGTAAATGGTCTCAAAGAT-CTGCACATTCAGCAGGCGCGCCTCCTGGCTGTC 58336 Query 2070111 CCACGGCAGGTCCATCATGGCAAACGCGTCGGCCAGGCCCTGCACGCCGACGCCCATCGG 2070170 |||| | |||| || ||||| ||||| |||||||| || |||| || || || Sbjct 58335 GAACGGATAGCCCATGATCATGAACGCATCGGCAAGGCCCTGGACACCGATACCGATGGG 58276 Query 2070171 CCGGTGGCGCAGGTTCGAGTGCCGGGC-CTCGGGCACCGGGTAGTGGTTGATGTCGATCA 2070229 ||||| |||| ||||||| | || || ||| ||| ||||||| |||||| ||||| | Sbjct 58275 GCGGTGCCGCATGTTCGAGCGACGTGCACTC-TCCACAGGGTAGTAGTTGATATCGATGA 58217 Query 2070230 CGCGGTTGAGGTT 2070242 |||||| ||||| Sbjct 58216 TGCGGTTCAGGTT 58204 Score = 100 bits (110), Expect = 5e-15 Identities = 111/148 (75%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 2069603 GGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTGATGA 2069662 |||||||||| || || || | ||||| |||||| |||| |||||||||||| Sbjct 58693 GGTTGACCACCTGGAACTCACCGGCAAGCACACGGCGCATGTAAATGTTGCTCGTGTACG 58634 Query 2069663 CCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCA 2069722 ||| | |||| || ||| |||||||| ||| | |||||| |||||| |||||| Sbjct 58633 GCTCAAAGCACTCGTTGAAGCCAAGGATCTGACTCGTGGAGGCCGTCGGCATGGGCGCCA 58574 Query 2069723 CGAGCAGCGAGTTGCGCAGGCCGTACTG 2069750 ||||||||||||||||| |||| ||| Sbjct 58573 TCAGCAGCGAGTTGCGCAGACCGTGCTG 58546 >seq4 Length=1215465 Score = 129 bits (142), Expect = 9e-24 Identities = 259/377 (69%), Gaps = 18/377 (5%) Strand=Plus/Minus Query 2175024 AAGGTGTGTGGCTGCGCGGCGGTGCGCACGGCATCGAGCGCCGTTGCCAC-GCTGCCGTC 2175082 |||| ||| ||||||| | | ||| | ||||||| ||| | |||| || |||||| Sbjct 450550 AAGGCGTGCGGCTGCGACGACGCGCGGATCGCATCGACCGC-GACGCCAATGCCGCCGTC 450492 Query 2175083 GGTGCCGTTTTTAAACCCGACCGGCAACGGCAGCGCCGACGCCATTTCGCGGTGCACCTG 2175142 || ||| || || || | ||||| || ||| ||||| | | |||||||||| ||| Sbjct 450491 CGTAGAGTTCTTGAAGCCAATCGGCAGCGACAGGCCCGACACAAGCTCGCGGTGCAGCTG 450432 Query 2175143 GCTCTCGGTGGTGCGCGCGCCCACGGCGCCCCACGCCACGAGGTCTGCCAAATA---GGG 2175199 |||||| || |||||||| | ||||||||||| || || | || || ||| Sbjct 450431 CGACTCGGTCGTACGCGCGCCGATCGCGCCCCACGCGTACAGATCCGACAGGTACTGGGG 450372 Query 2175200 CGCCACCAAAGGGCTGAGAAACTCGACAGCCACGGGCTGGCCGACGTCGACGACCAGGTC 2175259 || | | | | ||| | |||| ||||| ||| |||| | ||| | ||| Sbjct 450371 CGAGATC---GTGTCGAGCACCTCGCACGCCACAGGCAGGCCAATCTCGTTAAT---GTC 450318 Query 2175260 GCGCAGCAGTCGACGCG--ATGTGGCGAGGCCGGCGGCCAGGCGGCACGACCCGTCGAGG 2175317 |||||| | |||| ||||| |||||| | | || |||| ||||||||| Sbjct 450317 AATCAGCAGCTGGCGCGCAATGTGC--AGGCCGCGGTTGATCTGGAACGAGCCGTCGAGG 450260 Query 2175318 TCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAGGCG 2175377 | |||||| || ||| |||||||| |||||||||||||||||||| || | ||||| Sbjct 450259 TTCGGGTCGTTGATCAGACCCTTCCAGCCGACGGTCGTGCGCGGCTTCTCAAAGTAGGCC 450200 Query 2175378 CGC---ATGACCACCAG 2175391 ||| |||||||| || Sbjct 450199 CGCATAATGACCACAAG 450183 >seq3 Length=1365147 Score = 114 bits (126), Expect = 2e-19 Identities = 177/253 (70%), Gaps = 0/253 (0%) Strand=Plus/Plus Query 1485473 ACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGA 1485532 ||||||| || | |||| |||| | || ||||||| | | ||| ||||| | | | Sbjct 505085 ACTTGGTCACCGAGCGGGTAGCCTCGGCGATGGCGTGCTTCGACAGCTCGCCAGGGAGAA 505144 Query 1485533 TCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCG 1485592 ||| || || || ||||||||||| || | ||| ||| | |||||| || | Sbjct 505145 TCAAACGAACAGCCGTCTGGATCTCACGCGAAGAGATGGTGCTCTTCTTGTTGTAGCTGG 505204 Query 1485593 CCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGA 1485652 |||| |||||||||| ||||||| |||| ||||| | || |||||||| | | Sbjct 505205 CCAGCTTCGAGGCCTCGGTGGCGATGCGCTCGAAGATGTCCTGCACGAACGAGTTGAGAA 505264 Query 1485653 TCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAAA 1485712 | | ||| | ||||| ||||| || ||||||||||||||||||||| || ||| | Sbjct 505265 TGGCCATGGCCTTGTTCGAGATACCAGTGTCGGGGTGCACCTGCTTGAGGACACGGTAGA 505324 Query 1485713 CAAAGGACGAGTA 1485725 ||| |||||| Sbjct 505325 TGTAGGTCGAGTA 505337 >seq1 Length=1515123 Score = 107 bits (118), Expect = 3e-17 Identities = 345/520 (66%), Gaps = 31/520 (6%) Strand=Plus/Minus Query 653628 TCACCCGCGCCATGCGCCAGCCCGAGGTGGGCGACAAACTGTCGTCGCGCCACGGGCAAA 653687 ||| |||| | ||| | ||| ||| |||||||||| | |||||||||||||| |||| Sbjct 879687 TCATCCGCCAGACGCGGCGGCCAGAGCTGGGCGACAAGTTCTCGTCGCGCCACGGCCAAA 879628 Query 653688 AGGGCACC-GTGGGCAGCGTGCGCTCGACCGAGGAAATGCCGTGGTCGCCGCGCGGGGGC 653746 ||||| |||| | | || || || ||||| |||||| || ||| || Sbjct 879627 AGGGCGTGTGTGGTCTGATTGTGC-CGCAGGAGGACCTGCCGT--TCACCGACGACGGTA 879571 Query 653747 GCCACGCCCGACATCGTCATCAACCCGCACGCCATCCCGTCGCGCATGACCATGGGCAAG 653806 |||| ||||||||| |||| ||||| |||| | |||||||||| ||||| | |||||| Sbjct 879570 TCCAC-CCCGACATCATCATGAACCCCCACGGCTTCCCGTCGCGTATGACGGTCGGCAAG 879512 Query 653807 ATGATGGAGGCCCTCCTG---GGCAAGG-TGGCCTGCCGCGAGGGCTACGTGGGCGACGG 653862 ||||| ||| || ||| ||||||| || || ||| |||| || |||| Sbjct 879511 ATGATCGAG---CTGCTGGCCGGCAAGGCCGGTGTG-ATCGATGGCTCGCTGCAGTACGG 879456 Query 653863 CACCCCGTTTGGCGGCGTCAC-CGTNNNNNNNNNNNNNNNNNAGTTGGCCCGCCACGGGT 653921 ||| | || |||||| || | ||| | | | ||||| | Sbjct 879455 CACGGCCTTCGGCGGC-TCGCGCGTCGAGGATATGGCCCGCATCCTCGTGCAGCACGGCT 879397 Query 653922 GCGAGCGCTAC---GGCAAGGAGGTGCTCTACCACCCGCAC-ACGGGCGAGCCCATGGAG 653977 | | |||| ||||| ||| ||| || | | |||| || || || || | ||| Sbjct 879396 ACAA---CTACGGTGGCAAAGAGTACCTC-ACGAGCGGCACGACCGGTGAACCGCTCGAG 879341 Query 653978 GCGT---TGATCTTTTCGGCGCCGGTCTACTACCAGGCCCTGCGCCACGTGGCCATCGAC 654034 |||| || |||| ||| ||| ||||||||||| || ||| ||| ||| ||| Sbjct 879340 GCGTACGTGTACTTT--GGC-CCGATCTACTACCAGAAGCTCAAGCACATGGTCATGGAC 879284 Query 654035 AAGATCCACGCCCGGCCGCGCGG-CCCCGTGCAGATGCTCACCAAGCAGCCGGTCGAGGG 654093 ||||| ||||| || ||||||| || ||||| | ||||||| |||||| |||||| Sbjct 879283 AAGATGCACGCGCGCGCGCGCGGACCGCGTGCCG-TGCTCACGCGCCAGCCGACCGAGGG 879225 Query 654094 CCGGTCGCGCTCGGGCGGCTTTCGCCTCGGAGAGATGGAG 654133 || ||| || || | || ||||| ||||||||| Sbjct 879224 ACGCAGCCGCGACGGTGGTCTGCGGCTCGGCGAGATGGAG 879185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916245549003512