Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01-
09] 8 sequences; 7,757,162 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq1 131 1e-25
seq4 114 8e-21
seq5 105 4e-18
>seq1
Length=1515123
Score = 131 bits (144), Expect = 1e-25
Identities = 159/214 (74%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGC-TGCGCTCAT 34823
||| |||||||| | |||||||||||||||||||| ||||| | || || |||| |||
Sbjct 1006395 CAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTC-GCTAAGCGTGCGGCCAT 1006337
Query 34824 CGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGT 34883
| ||||| ||||| ||||| |||||||| || || ||||| | || | ||||||||||
Sbjct 1006336 CCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGT 1006277
Query 34884 CGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943
| | || || ||||| | |||| || | |||||| || | ||| || |
Sbjct 1006276 CCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCG 1006217
Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||| || ||||| ||||| |||||||| |||||
Sbjct 1006216 TCTTGCCGGTGAGAGTCTTGACAAAGATTTGCAT 1006183
Score = 127 bits (140), Expect = 1e-24
Identities = 158/214 (74%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGC-TGCGCTCAT 34823
||| |||||||| | |||||||||||||||||||| ||||| | || || ||||| |||
Sbjct 1005939 CAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTC-GCTAAGCGTGCGCCCAT 1005881
Query 34824 CGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGT 34883
| ||||| ||||| ||||| || ||||| || || || || | || | ||||||||||
Sbjct 1005880 CCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGATCCGGAGGAATACCCTCCTTGT 1005821
Query 34884 CGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943
| | || || |||||| | |||| || | ||||| || | || || |
Sbjct 1005820 CCTGAATCTTGGCCTTGACGTTGTCAATCGTGTCCGACGATTCGACCTCGAGAGTGATCG 1005761
Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||| || ||||||||||| |||||||| |||||
Sbjct 1005760 TCTTGCCAGTGAGGGTCTTAACAAAGATTTGCAT 1005727
Score = 122 bits (134), Expect = 6e-23
Identities = 157/214 (73%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGC-TGCGCTCAT 34823
||| |||||||| | |||||||||||||||||||| ||||| | || || ||||| |||
Sbjct 1006167 CAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTC-GCTAAGCGTGCGCCCAT 1006109
Query 34824 CGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGT 34883
| ||||| ||||| ||||| || |||| || || || || | || | ||||||||||
Sbjct 1006108 CCTCCAGCTGCTTGCCGGCAAAAATCAAACGCTGTTGATCCGGAGGAATGCCCTCCTTGT 1006049
Query 34884 CGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943
| | || || ||||||| | |||| || | ||||| || | || || |
Sbjct 1006048 CCTGGATCTTGGCTTTGACGTTGTCAATCGTGTCCGACGATTCGACTTCGAGAGTGATCG 1005989
Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||| || ||||| ||||| |||||||| |||||
Sbjct 1005988 TCTTGCCGGTGAGAGTCTTGACAAAGATTTGCAT 1005955
Score = 109 bits (120), Expect = 4e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| |||| ||| | |||||||||||||||||||| ||||| || |||| ||||
Sbjct 1006623 CAGCACCAAGTGCAACGTGCTCTCCTTCTGAATGTTGTAGTCGCTGAGCGTGCGACCATC 1006564
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
||||| ||||| || || || |||| || || ||||| | || | |||||||||||
Sbjct 1006563 CTCCAGCTGCTTGCCAGCAAAAATCAAACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTC 1006504
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944
| || || |||||| | |||| || | ||||| || | || || ||
Sbjct 1006503 CTGGATCTTGGCCTTGACGTTGTCAATCGTGTCCGACGATTCGACCTCGAGAGTGATCGT 1006444
Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||| || ||||||||||| |||||||| |||||
Sbjct 1006443 CTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1006411
>seq4
Length=1215465
Score = 114 bits (126), Expect = 8e-21
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| || ||||| | ||||||||||||||||||||| ||||| || |||| | ||
Sbjct 412024 AGCACAAGGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCGTCC 411965
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| || ||||||||||| || || ||||| | || | |||||||||||
Sbjct 411964 TCGAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCC 411905
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || ||||| | |||| || | |||||| |||| ||| || |||
Sbjct 411904 TGGATCTTGGCCTTGACATTGTCGATCGTGTCCGACGACTCGACCTCAAGGGTAATCGTC 411845
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| || || || ||||| || ||||| ||||||
Sbjct 411844 TTGCCAGTCAGAGTCTTGACGAAGATTTGCATG 411812
>seq5
Length=679138
Score = 105 bits (116), Expect = 4e-18
Identities = 156/219 (71%), Gaps = 4/219 (2%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| || ||||| | |||||||||||||| ||||| ||||| || |||| ||||
Sbjct 231787 CAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGACCATC 231846
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
||||| ||||| |||||||||||||| || || ||||| | || | |||||||||||
Sbjct 231847 CTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGGATACCCTCCTTGTC 231906
Query 34885 GTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATG 34942
| || || || || || || |||| || | ||| || || | ||| ||
Sbjct 231907 CTGGATCTTGGCCTTCAC--ATTCTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATC 231964
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGATA 34981
||||| || || |||||||| || || | |||||| ||
Sbjct 231965 GTCTTCCCGGTAAGGGTCTTGACGAACACTTGCATGGTA 232003
Score = 100 bits (110), Expect = 2e-16
Identities = 94/120 (78%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
|||||| ||||| | |||||||||||||| || || ||||| ||| | || ||||
Sbjct 141839 CAGGACAAGGTGCAGCGTGCTCTCCTTCTGGATATTGTAGTCACTCAGGGTACGTCCATC 141780
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
||||||||||| || || |||||||| || |||||||| |||| | |||||||||||
Sbjct 141779 CTCCAGTTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGCGGAATGCCCTCCTTGTC 141720
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325692768244952
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |