Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01- 09] 8 sequences; 7,757,162 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq1 152 5e-32 seq4 122 8e-23 seq5 116 3e-21 >seq1 Length=1515123 Score = 152 bits (168), Expect = 5e-32 Identities = 179/238 (75%), Gaps = 3/238 (1%) Strand=Plus/Minus Query 35501 TCTTTATTT-CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTT 35559 |||||| | |||||||| | | || |||||| || ||||| |||||||| |||||||| Sbjct 1006647 TCTTTACTGGCCACCACGGAGACGCAGCACCAAGTGCAACGTGCTCTCCTTCTGAATGTT 1006588 Query 35560 GTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTG 35619 ||| ||| | || || | || ||||||||||| || ||||| ||||| ||||| || Sbjct 1006587 GTAGTCGCTGAGCGTGCGACCATCCTCCAGCTGCTTGCCAGCAAAAATCAAACGCTGTTG 1006528 Query 35620 GTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGC 35678 ||||| ||||| || |||||||||| |||||| ||| | |||| | | |||||| Sbjct 1006527 GTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCAATCGTGTCCG 1006469 Query 35679 TCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||||| ||||| | |||||||| || || || | || || ||||| || ||||| Sbjct 1006468 ACGATTCGACCTCGAGAGTGATCGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1006411 Score = 147 bits (162), Expect = 2e-30 Identities = 173/229 (76%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | || ||||| || | ||| |||||||| ||||||||||| ||| | Sbjct 1006181 CCACCACGGAGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCG-CT 1006123 Query 35570 AAG-GTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGG 35628 ||| || ||| | || ||||||||||| || ||||| ||||| ||||| || |||| ||| Sbjct 1006122 AAGCGTGCGCCCATCCTCCAGCTGCTTGCCGGCAAAAATCAAACGCTGTTGATCCGGAGG 1006063 Query 35629 AACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCA 35687 || || |||||||||| |||| || |||| |||| | | |||||| |||||| | Sbjct 1006062 AATGCCCTCCTTGTCCTGGATC-TTGGCTTTGACGTTGTCAATCGTGTCCGACGATTCGA 1006004 Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | || | |||||||| || || || | ||| || ||||| || ||||| Sbjct 1006003 CTTCGAGAGTGATCGTCTTGCCGGTGAGAGTCTTGACAAAGATTTGCAT 1005955 Score = 136 bits (150), Expect = 4e-27 Identities = 173/233 (74%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | || ||||| || | ||| |||||||| ||||||||||| ||| | Sbjct 1005953 CCACCACGGAGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCG-CT 1005895 Query 35570 AAG-GTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGG 35628 ||| || ||| | || ||||||||||| || ||||| |||| ||||| || |||| ||| Sbjct 1005894 AAGCGTGCGCCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGATCCGGAGG 1005835 Query 35629 AACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCA 35687 || | |||||||||| ||||| ||| | |||| | | |||||| |||||| | Sbjct 1005834 AATACCCTCCTTGTCCTGAATCTTGGCCTTGA-CGTTGTCAATCGTGTCCGACGATTCGA 1005776 Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 |||| | |||||||| || || || | || || ||||| || |||||| || Sbjct 1005775 CCTCGAGAGTGATCGTCTTGCCAGTGAGGGTCTTAACAAAGATTTGCATTGTG 1005723 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | || ||||| || | ||| |||||||| ||||||||||| ||| | Sbjct 1006409 CCACCACGGAGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCG-CT 1006351 Query 35570 AAG-GTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGG 35628 ||| || || | || ||||||||||| || ||||| |||| ||||| ||||||| ||| Sbjct 1006350 AAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGTTGGTCCGGAGG 1006291 Query 35629 AACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688 || | |||||||||| ||||| ||| | | | | | |||||| ||| || || Sbjct 1006290 AATACCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGAC 1006231 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | |||||||| || || || | ||| || ||||| || ||||| Sbjct 1006230 CTCGAGGGTGATCGTCTTGCCGGTGAGAGTCTTGACAAAGATTTGCAT 1006183 >seq4 Length=1215465 Score = 122 bits (134), Expect = 8e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599 || |||||||| ||||||||||| ||| || || || |||| || ||||||||||| Sbjct 412009 GTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCGTCCTCGAGCTGCTTACCA 411950 Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659 || || |||| ||||| ||||||| ||| | || |||||||||| |||||| ||| Sbjct 411949 GCGAAGATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 411890 Query 35660 AGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTT 35719 | | | | | |||||| ||| || ||||| | || ||||| || || |||| ||| Sbjct 411889 ACATTGTCGATCGTGTCCGACGACTCGACCTCAAGGGTAATCGTCTTGCCAGTCAGAGTC 411830 Query 35720 TTCACAAATATCTGCAT 35736 || || || || ||||| Sbjct 411829 TTGACGAAGATTTGCAT 411813 >seq5 Length=679138 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | || ||| | || | ||| |||||||| || |||||||| ||| | Sbjct 231773 CCACCACGCAGGCGCAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 231832 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || ||||||||||| || || || |||| ||||| ||||||| ||| Sbjct 231833 AGCGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGG 231892 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||||| |||||| ||||| | | | | ||||||| || |||||| Sbjct 231893 ATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACC 231952 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | |||||||| || || || | || || || || | ||||| Sbjct 231953 TCGAGGGTGATCGTCTTCCCGGTAAGGGTCTTGACGAACACTTGCAT 231999 Score = 93.3 bits (102), Expect = 4e-14 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 35539 CGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACC 35598 ||| |||||||| || || ||||| || || ||| || | || ||||| ||||| || Sbjct 141824 CGTGCTCTCCTTCTGGATATTGTAGTCACTCAGGGTACGTCCATCCTCCAGTTGCTTGCC 141765 Query 35599 CGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTT 35652 |||||| |||| ||||||||||||| |||| || |||||||||| |||||| Sbjct 141764 CGCAAAGATCAGGCGCTGCTGGTCCGGCGGAATGCCCTCCTTGTCCTGGATCTT 141711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793554920640