Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01- 09] 8 sequences; 7,757,162 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1 125 6e-24 seq4 111 1e-19 >seq1 Length=1515123 Score = 125 bits (138), Expect = 6e-24 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 || || ||||| ||||||||||| | ||||| | || || ||||| || ||||| || Sbjct 1006145 TCCTTCTGAATGTTGTAGTCGCTAAGCGTGCGCCCATCCTCCAGCTGCTTGCCGGCAAAA 1006086 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 || | ||||||||||||||| || | ||||| || || ||||||| ||| | | | Sbjct 1006085 ATCAAACGCTGTTGATCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCTTTGACGTTG 1006026 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | ||||| | | ||| ||||| ||||| || | ||||| || ||||| || ||| Sbjct 1006025 TCAATCGTGTCCGACGATTCGACTTCGAGAGTGATCGTCTTGCCGGTGAGAGTCTTGACA 1005966 Query 27237 AAGATTTGCATA 27248 |||||||||||| Sbjct 1005965 AAGATTTGCATA 1005954 Score = 114 bits (126), Expect = 1e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 || || ||||| ||||||||||| | ||||| | || || ||||| || ||||| || Sbjct 1005917 TCCTTCTGAATGTTGTAGTCGCTAAGCGTGCGCCCATCCTCCAGCTGCTTGCCGGCAAAA 1005858 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 || ||||||||||||||||| || | |||||| || || |||||| || | | | Sbjct 1005857 ATCAGACGCTGTTGATCCGGAGGAATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTG 1005798 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | ||||| | | ||| || || ||||| || | ||||| || || || || ||| Sbjct 1005797 TCAATCGTGTCCGACGATTCGACCTCGAGAGTGATCGTCTTGCCAGTGAGGGTCTTAACA 1005738 Query 27237 AAGATTTGCAT 27247 ||||||||||| Sbjct 1005737 AAGATTTGCAT 1005727 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079 ||| || || | |||| ||||| || ||||| || || ||||| ||||||||||| Sbjct 1006638 GCCACCACGGAGACGCAGCACCAAGTGCAACGTGCTCTCCTTCTGAATGTTGTAGTCGCT 1006579 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | |||| | || || ||||| || || || |||| | ||||||||| ||||| || Sbjct 1006578 GAGCGTGCGACCATCCTCCAGCTGCTTGCCAGCAAAAATCAAACGCTGTTGGTCCGGAGG 1006519 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||||| || || ||||||| || | | | || | ||||| | | ||| || Sbjct 1006518 AATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATCGTGTCCGACGATTCGAC 1006459 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || ||||| || | ||||| || || || || ||||||||||||||| Sbjct 1006458 CTCGAGAGTGATCGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCATA 1006410 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 || || ||||| ||||||||||| | |||| | || || ||||| || ||||| | Sbjct 1006373 TCCTTCTGAATGTTGTAGTCGCTAAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAG 1006314 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 || ||||||||||| ||||| || | |||||| || || |||||| || | | Sbjct 1006313 ATCAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGAATCTTGGCCTTGACATTG 1006254 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | ||||| | | || || || || || || | ||||| || ||||| || ||| Sbjct 1006253 TCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTTGCCGGTGAGAGTCTTGACA 1006194 Query 27237 AAGATTTGCATA 27248 |||||||||||| Sbjct 1006193 AAGATTTGCATA 1006182 >seq4 Length=1215465 Score = 111 bits (122), Expect = 1e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 || || ||||| ||||||||||||| |||| |||| |||||||| ||||| ||| | Sbjct 412003 TCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAG 411944 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 || ||||||||||| ||||| || | ||||| || || ||||||| || | | Sbjct 411943 ATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTG 411884 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | ||||| | | || || || || || || | ||||| |||||||| || || Sbjct 411883 TCGATCGTGTCCGACGACTCGACCTCAAGGGTAATCGTCTTGCCAGTCAGAGTCTTGACG 411824 Query 27237 AAGATTTGCATAGC 27250 ||||||||||| || Sbjct 411823 AAGATTTGCATGGC 411810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424934358568896