Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01- 09] 8 sequences; 7,757,162 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq8 114 4e-20 >seq8 Length=447081 Score = 114 bits (126), Expect = 4e-20 Identities = 237/350 (68%), Gaps = 12/350 (3%) Strand=Plus/Plus Query 254954 ACGAACGGACGGAGCGGCGGCATTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGC 255013 |||||||| |||| ||| ||| | || ||| |||| |||| ||||||| ||| ||| Sbjct 57562 ACGAACGGTGTGAGCAACGGTATTGTGCCCATGCTCCGCGTGTACAACAACACGGCGCGC 57621 Query 255014 TACGTCGATCAAGGGGGCGGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGG 255073 ||||| || || || ||| ||| ||||| || || || | |||||||||||||||||| Sbjct 57622 TACGTGGACCAGGGCGGCAACAAGCGCCCGGGCGCCTTTGCGATCTACCTGGAGCCGTGG 57681 Query 255074 CACGCCGAC---ATTGAACGGTTTTTACTGCTGTCCGACAAGACC---GGCACCGAGGAG 255127 ||| | ||| ||||| |||| || | | || ||||| | |||| ||||| Sbjct 57682 CACTCGGACGTTTTTGAA-----TTTATTGATCTGCG-CAAGAACCATGGCAAGGAGGAA 57735 Query 255128 CTGATCGCCCGCGACATCTACACCGCTGTCTGGTGCTGCGATCTGTTTATGCGACGCGTG 255187 || ||| |||||| | | | || | ||| ||||||||| ||||| || || Sbjct 57736 GTGCGCGCGCGCGACCTGTTCCTGGCGCTGTGGATTCCCGATCTGTTCATGCGCCGTGTC 57795 Query 255188 GAACGAGACGAGACCTGGAGCCTCATGTGTCCCAACTTATCGCCCGGTCTAGTCGACTCT 255247 |||| ||| |||| || ||||| ||| | | || ||||| | |||| Sbjct 57796 GAACAGAACGGCGACTGGTCGCTGATGTGCCCCGCCGAGTGCCCAGGTCTGGCTGACTGC 57855 Query 255248 TGGGGTGACGAGTTTGAAAAACTGTATCTGGAGTACGAGCGTGCCGGCCG 255297 | || || |||||||| ||||| | |||||||||| | ||||| Sbjct 57856 TATGGCGAGGAGTTTGATGCTCTGTACGAGAAGTACGAGCGCGAGGGCCG 57905 Score = 98.7 bits (108), Expect = 3e-15 Identities = 395/607 (65%), Gaps = 19/607 (3%) Strand=Plus/Minus Query 443270 GCGGTTCGTCTTGTTCCCCGTTCAGCATCC-CGACATCTACGACATGTACAA-ACGACAA 443327 ||| || ||| | ||||| | || || || ||| |||| | |||||||| | | | Sbjct 45861 GCGCTTTGTCCTCTTCCC-GATCCGCTACCACGAGATCTGGCAGATGTACAAGAAGGCC- 45804 Query 443328 GTGGCCCAGTTTTGGACCATGGAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAAC 443387 | |||| ||| |||||| |||||||| || ||||| |||||| || ||| ||| || Sbjct 45803 GAGGCCTCGTTCTGGACCGCCGAGGAGATGGACCTCTCGAAGGACCTGCACGACTGGGAC 45744 Query 443388 GAACGACT-ATCTAGCCATGAACGCGATTTCTTCAAATGCATCTTGGCCTTCTTTGCACC 443446 | || | | | | | |||| ||| | || | | | || ||||||||||||| | Sbjct 45743 CACCGCATGAACGA-CAATGAGCGCCACTTTGTGAGCCACGTCCTGGCCTTCTTTGCTGC 45685 Query 443447 GAGCGACGGTATCGTCGGTGAGAATCTGGTGACGCGTTTCTACGAAATGGTAGTGTACAC 443506 |||||||||||| ||||| ||||| ||| ||| || ||| | | | Sbjct 45684 TTCGGACGGTATCGTCAACGAGAACCTGGTCGAGCGCTTCAGCGCCGAGGTGCAGGCCGC 45625 Query 443507 CGAGGCCCGCTACTTCTACGCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCTA 443566 ||||||||||| |||||||| ||||| | ||||||||||| ||| | ||| || Sbjct 45624 CGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCGGAGACGTA 45565 Query 443567 CAGTCAGTTGATCAAGACAC-TAATTCCGAACGAAGACGAACAGCG---GTCCATCTTCT 443622 | | | ||| ||||| || |||| ||| || ||||| || | ||||| Sbjct 45564 CTCGCTCCTCATC--GACACGTACATCCG--CGAGCCGGAGCAGCGTGAGTTCCTCTTCA 45509 Query 443623 CATCGTTCATGACCACGCCAGGCATCACTGAAAAGACTCGCTGGGCAAAACAGTGG--CT 443680 | || ||| | || | | ||| | ||| | ||||| | ||| || Sbjct 45508 ACGCTATCGAGACGATTCCCGTCGTCAAGCAGAAGGCCGAGTGGGCCCTGCGCTGGATCT 45449 Query 443681 CGAACGAGAAAATCTCAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACT 443740 || || | ||| ||| ||||| || || || ||||| | ||||| || | Sbjct 45448 CGGACAGGCGCGCCTC--GTTCTCGGAGCGCCTTGTGGCCTTTGCCGCCGTCGAGGGCAT 45391 Query 443741 GTTGTTTAGCGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACG 443800 || ||| ||| | || ||||||||||||||| | || ||||| || || |||| | Sbjct 45390 CTT-TTTCTCGGGCTCGTTTGCCTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCTG 45332 Query 443801 GTCTGACCTTTAGTAACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCT 443860 ||||| | || ||||| || ||| || |||||||| |||| |||||| |||| Sbjct 45331 GTCTGTCGTTCTCGAACGAGCTCATCTCGCGCGACGAGGGCCTGCACACCGACTTTGCCT 45272 Query 443861 GTCTTCT 443867 |||| || Sbjct 45271 GTCTCCT 45265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588335837195560