Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01- 09] 8 sequences; 7,757,162 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq6 280 4e-70 seq1 131 5e-25 seq3 93.3 1e-13 seq2 87.8 5e-12 >seq6 Length=634896 Score = 280 bits (310), Expect = 4e-70 Identities = 942/1446 (65%), Gaps = 33/1446 (2%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 ||| | || || ||||| ||||| || || |||||||| || || ||||| || || ||| Sbjct 329712 GCTGTTGGTATTGATTTGGGTACCACCTACTCTTGTGTGGCCGTCTGGCAGAACGACCGT 329653 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || | ||||| || || || |||||| | || || || || |||||||| || ||| Sbjct 329652 GTCGAGGTCATTGCCAACGACCAGGGTAACCGTACGACTCCTTCGTACGTTGCCTTCACC 329593 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || |||||| |||| |||||| | || || || || | ||| || || | || Sbjct 329592 GACACGGAGCGTCTGATCGGTGATGCCGCCAAGAACCAGGTGGCTATGAACCCCCACAAC 329533 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTTTTCTGACAAATCTACACAATC 349437 || || || || || ||||| || |||||| | ||||| | |||| || || Sbjct 329532 ACTGTCTTCGACGCCAAGCGTCTGATTGGTCGCAAGTTCAAC-GACACTGAGGTTCAGTC 329474 Query 349438 TGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGG---TGATAAACCAATTAT 349494 ||| | || || | || || | || || ||| | || ||| || |||| Sbjct 329473 GGATATGAAGCACTGGCCGTTCTCGGTCATT------GACCGCTCTGGTAAGCCCGTTAT 329420 Query 349495 TGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCC--GAAGAAATTTCATCAATG 349552 || ||||| || ||||| | || || || || | || ||||| || || ||| Sbjct 329419 CCGCGTCGAATACAAGGGTGAGGAGAAG--ATCTTCACTCCTGAGGAAATCTCCTCGATG 329362 Query 349553 GTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGG-TGAAACAGTAACTGATGC 349611 || | |||| ||| || | ||||| || || | || | || || | ||||| Sbjct 329361 GTCCTGCTTAAGATGCGTGAGACCGCTGAGGCTTACCTTGGCTCGGAC-GTGAAGGATGC 329303 Query 349612 TGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGG 349671 ||| | ||||| || ||||| || || || | ||||| || || || || ||||| Sbjct 329302 TGTGGTGACTGTCCCGGCCTACTTCAACGACTCGCAGCGCCAGGCTACCAAGGACGCTGG 329243 Query 349672 CAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGC 349731 |||||||| | ||||| | | || ||||| || || || ||||| || ||||| Sbjct 329242 TGTGATTGCGGGTCTCAATGTCATGCGTATCATTAACGAGCCTACGGCTGCTGCTATTGC 329183 Query 349732 ATATGGGCTTGATAA-AATGA-GTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGT 349789 || || || || || || || | | || |||| || || ||||| || || | ||| Sbjct 329182 CTACGGTCTCGACAAGAAGGACGAGTCCGAGAAGAATGTA--CTTATCTTCGACCTGGGT 329125 Query 349790 GGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCA 349849 ||||||||||| ||||| || || || || | || ||||| || || || ||||| || Sbjct 329124 GGTGGTACTTTCGATGTGTCGCTCCTGACGATCGAGGAGGGTATCTTCGAGGTTAAGGCT 329065 Query 349850 ACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTT 349909 || || ||||| || || |||||||| || || ||||| || ||||| || || ||| Sbjct 329064 ACCGCGGGTGACACGCACCTTGGTGGTGAGGACTTTGACAACCGTCTTGTGAACCACTTT 329005 Query 349910 GTTAAAGAATTTAAGCGTCAAG-CTAAAATTGATATTGGAGATAATC-CTAGAGCAATGC 349967 || | || || ||||| |||| || | ||| || | || | || | || ||| Sbjct 329004 GTGCAGGAGTTCAAGCG-CAAGAACAAGAAGGAT-CTGACCACAAACGCTCGTGCTCTGC 328947 Query 349968 GTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCT 350027 |||| || | ||||| | || ||||||||||| | | || || || |||| ||| Sbjct 328946 GTCGTCTGCGCACTGCTTCGGAGCGTGCTAAGCGCACTCTCTCGTCGGCTGCCCAGACCA 328887 Query 350028 CTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTC 350087 | ||||| ||||| || || ||| || | || |||| |||||||||| ||||| | Sbjct 328886 CCATTGAGATTGACTCGCTCTTTGAGGGTATTGACTTCTACACATCTATTACTCGTGCCC 328827 Query 350088 GGTTTGAAGAATTATGTATGGATCT-TTTTAGAGCAACAATGGATCCTGTGGAAAAAGTA 350146 | || || || | || || || || | | | || || || ||||| || || || Sbjct 328826 GTTTCGAGGAGCTTTGCGGTGACCTCTTCTCGCAC-ACCATTGACCCTGTCGAGAAGGTC 328768 Query 350147 TTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCT 350206 | ||||| || || ||| | | | | || | || | |||||||| || Sbjct 328767 CTCCGTGATGCCAAGATCGACAAGGGTTCGGTCAACGAGATTGTGCTGGTTGGTGGCTCG 328708 Query 350207 ACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCT 350266 || |||||||| || || || | || || || || || ||| || || Sbjct 328707 ACTCGTATTCCTCGCGTGCAGAAGCTCCTTCGCGACTTCTTCAACGGCCGCGAGCCCAAC 328648 Query 350267 AGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTA 350326 | || || || || || || || ||||| || |||||||| || ||||| | ||| | Sbjct 328647 AAGTCTATCAACCCTGACGAGGCCGTTGCCTACGGTGCTGCCGTCCAGGCTGCCATTCTG 328588 Query 350327 TCTGGAAATAAGAGTTC---TAAAATTGATGATCTATTACTACTAGATGTAACTCCACTT 350383 || || | | | ||| || | | ||||| | || || ||||| | || ||| Sbjct 328587 TCCGG---TGACACTTCGGAGAAGACGCAGGATCTGCTGCTGCTCGATGTCGCCCCTCTT 328531 Query 350384 TCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACT 350443 ||| | || | || || | |||| || | ||| ||| || | || | ||| Sbjct 328530 TCGATGGGTATCGAGACCGCCGGTGGTGTCTTCACTCCTCTGATCAAGCGCAACACGACT 328471 Query 350444 GTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACA 350503 || ||||| || ||||| | || || || | ||| || || ||||| | || Sbjct 328470 GTGCCTACGAAGAAGTCGGAGGTCTTCTCGACGTATGCCGACAACCAGCCTGGTGTGCTG 328411 Query 350504 ATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTT 350563 || || || || || ||||| ||||| ||||| || || || || || || | ||| Sbjct 328410 ATCCAGGTGTTCGAGGGTGAGCGTGCCCGCACCAAGGACAACAACCTGCTGGGTAAGTTT 328351 Query 350564 ACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGAT 350623 || | ||||| || ||| | || |||||||||||||| ||| |||||||| Sbjct 328350 GAGCTTTCGGGTATTCCCCCGGCTCCTCGTGGTGTTCCTCAGATTGAGGTCACTTTCGAT 328291 Query 350624 ATTGAT 350629 | ||| Sbjct 328290 GTCGAT 328285 >seq1 Length=1515123 Score = 131 bits (144), Expect = 5e-25 Identities = 172/236 (73%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || || || || || || ||| || ||||| || | Sbjct 1006189 TTTGCATACCACCACGGAGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGT 1006130 Query 140563 AATCAGATAA-TGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGA 140621 | || | ||| || |||||||| || || || || || ||||| || | ||| || ||| Sbjct 1006129 AGTC-GCTAAGCGTGCGCCCATCCTCCAGCTGCTTGCCGGCAAAAATCAAACGCTGTTGA 1006071 Query 140622 TCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGAT 140681 || |||||||| || || || ||||| || || ||||| || || ||||||| || || Sbjct 1006070 TCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCTTTGACGTTGTCAATCGTGTCCGAC 1006011 Query 140682 GGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | ||| ||||| || || | ||||| ||||| || || || ||||| || ||||| Sbjct 1006010 GATTCGACTTCGAGAGTGATCGTCTTGCCGGTGAGAGTCTTGACAAAGATTTGCAT 1005955 Score = 127 bits (140), Expect = 6e-24 Identities = 172/237 (73%), Gaps = 2/237 (1%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || || || || || || ||| || ||||| || | Sbjct 1005961 TTTGCATACCACCACGGAGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGT 1005902 Query 140563 AATCAGATAA-TGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGA 140621 | || | ||| || |||||||| || || || || || ||||| || ||||| || ||| Sbjct 1005901 AGTC-GCTAAGCGTGCGCCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGA 1005843 Query 140622 TCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGAT 140681 || |||||||| || || || |||||||| || || || || || ||||||| || || Sbjct 1005842 TCCGGAGGAATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCAATCGTGTCCGAC 1005783 Query 140682 GGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 | ||| || || || || | ||||| || || || || || ||||| || |||||| Sbjct 1005782 GATTCGACCTCGAGAGTGATCGTCTTGCCAGTGAGGGTCTTAACAAAGATTTGCATT 1005726 Score = 125 bits (138), Expect = 2e-23 Identities = 171/236 (72%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || || || || || || ||| || ||||| || | Sbjct 1006417 TTTGCATACCACCACGGAGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGT 1006358 Query 140563 AATCAGATAA-TGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGA 140621 | || | ||| || || ||||| || || || || || |||||||| ||||| || || Sbjct 1006357 AGTC-GCTAAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGTTGG 1006299 Query 140622 TCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGAT 140681 || |||||||| || || || |||||||| || || || ||||| ||||||| || || Sbjct 1006298 TCCGGAGGAATACCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAC 1006239 Query 140682 GGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || || || || || | ||||| ||||| || || || ||||| || ||||| Sbjct 1006238 GACTCGACCTCGAGGGTGATCGTCTTGCCGGTGAGAGTCTTGACAAAGATTTGCAT 1006183 >seq3 Length=1365147 Score = 93.3 bits (102), Expect = 1e-13 Identities = 93/121 (77%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 378232 ATATAACCAGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATT 378291 || |||||||||| | ||||| || ||||||||||| | ||| |||||||| |||| Sbjct 1331024 ATGTAACCAGTTTCAGCTGTTTTCACAGCAGTATCAATCAGACCTTCACGACCAGCCATG 1330965 Query 378292 GCATGGAAGAATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCT 378351 ||||||||||| |||||| | ||||| || | || | | ||| |||||| ||| ||| Sbjct 1330964 GCATGGAAGAAGAATTCATGCGCTGTAAGACCTCGAAGATACGAATTCTCAACAAAGCCT 1330905 Query 378352 C 378352 | Sbjct 1330904 C 1330904 >seq2 Length=1378717 Score = 87.8 bits (96), Expect = 5e-12 Identities = 220/333 (66%), Gaps = 5/333 (2%) Strand=Plus/Plus Query 349562 AAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACT 349621 || |||||||| | ||||| || || | || | | || || | ||||| ||||| Sbjct 956187 AAGATGAAGGAGACCGCTGAGGCTTACCTGGGCCACAAGGTCACCCACGCTGTCGTTACT 956246 Query 349622 GTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCG 349681 || || ||||| || ||||| |||||||| || || || || || || | || || Sbjct 956247 GTGCCGGCCTACTTCAATGACGCCCAGCGCCAGGCCACCAAGGACGCCGGTACGATCGCA 956306 Query 349682 GGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTT 349741 || | | || || | || | || || ||||| || || || || || || || || Sbjct 956307 GGTCTCGAGGTCCTCCGCATTGTGAACGAGCCCACCGCGGCTGCCATCGCCTACGGTCTG 956366 Query 349742 GATAA-AATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTT 349800 || || || ||| | || | || || | | ||| | ||||||||||| || Sbjct 956367 GACAAGAAGGAGGGC----GAGTCGCAGATCATTGTGTATGACCTGGGTGGTGGTACCTT 956422 Query 349801 TGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGA 349860 |||||| || || || || |||| ||| | ||||| || || || |||||||| Sbjct 956423 TGATGTCTCGCTTCTGACCATTGACTCGGGTGTGTTTGAGGTGCTTGCTACGGCTGGTGA 956482 Query 349861 TACACATCTTGGTGGAGAAGATTTTGATAATCG 349893 || ||||| ||||| || || ||||| || || Sbjct 956483 CACTCATCTCGGTGGTGAGGACTTTGACAACCG 956515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515254244686424