Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01-
09] 8 sequences; 7,757,162 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq1 140 3e-28
seq4 109 5e-19
>seq1
Length=1515123
Score = 140 bits (154), Expect = 3e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| || ||||| ||||||||| | || ||||| ||||| ||| ||||
Sbjct 1005955 ATGCAAATCTTTGTCAAGACTCTCACCGGCAAGACGATCACTCTCGAAGTCGAATCGTCG 1006014
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| ||||||| | |||||| || || || ||||| || ||||| || || ||||||
Sbjct 1006015 GACACGATTGACAACGTCAAAGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGATCAA 1006074
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||||| || | |||||||| || |||| || | || || ||| ||||||
Sbjct 1006075 CAGCGTTTGATTTTTGCCGGCAAGCAGCTGGAGGATGGGCGCACGCTTAGCGACTACAAC 1006134
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| |||||| || | || |||| ||||| | || ||||| ||
Sbjct 1006135 ATTCAGAAGGAGAGCACGCTGCACCTGGTGCTGCGTCTCCGTGGTGGTAT 1006184
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| || || || || |||||| | || ||||| || || ||| ||||
Sbjct 1006411 ATGCAAATCTTTGTCAAGACCCTCACTGGCAAGACGATCACTCTCGAGGTCGAATCGTCG 1006470
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| ||||||| | ||||| || || || ||||| || ||||| || || || |||
Sbjct 1006471 GACACGATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 1006530
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||||| || | || ||||| || |||| || || || | ||| ||||||
Sbjct 1006531 CAGCGTTTGATTTTTGCTGGCAAGCAGCTGGAGGATGGTCGCACGCTCAGCGACTACAAC 1006590
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
||||| |||||| || || || ||||| ||||| | || ||||||
Sbjct 1006591 ATTCAGAAGGAGAGCACGTTGCACTTGGTGCTGCGTCTCCGTGGTGGC 1006638
Score = 118 bits (130), Expect = 9e-22
Identities = 170/239 (71%), Gaps = 3/239 (1%)
Strand=Plus/Plus
Query 26982 TACGCCA---TGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTG 27038
||||||| |||| || ||||| || || || || |||||| | || ||||| || ||
Sbjct 1005718 TACGCCACAATGCAAATCTTTGTTAAGACCCTCACTGGCAAGACGATCACTCTCGAGGTC 1005777
Query 27039 GAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCA 27098
||| |||| ||| ||||||| | ||||| || ||||| ||||| || || || ||
Sbjct 1005778 GAATCGTCGGACACGATTGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGTATTCCT 1005837
Query 27099 CCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCC 27158
|| |||||||||||| | || | |||||||| || |||| || | || || |
Sbjct 1005838 CCGGATCAACAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGGCGCACGCTTAGC 1005897
Query 27159 GATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| ||||||||||| |||||| || | || |||| ||||| | || ||||| ||
Sbjct 1005898 GACTACAACATTCAGAAGGAGAGCACGCTGCACCTGGTGCTGCGTCTCCGTGGTGGTAT 1005956
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| || ||||| ||||||||| | || || || || || || ||||
Sbjct 1006183 ATGCAAATCTTTGTCAAGACTCTCACCGGCAAGACGATCACCCTCGAGGTCGAGTCGTCG 1006242
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| ||||||| | ||||| || ||||| ||||| || || || || || || |||
Sbjct 1006243 GACACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGTATTCCTCCGGACCAA 1006302
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | |||||||| || |||| || | || || ||| ||||||
Sbjct 1006303 CAGCGTCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTTAGCGACTACAAC 1006362
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| |||||| || | || |||| ||||| | || ||||| ||
Sbjct 1006363 ATTCAGAAGGAGAGCACGCTGCACCTGGTGCTGCGTCTCCGTGGTGGTAT 1006412
>seq4
Length=1215465
Score = 109 bits (120), Expect = 5e-19
Identities = 141/195 (72%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 26985 GCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCG 27044
|||||||| || || || || |||||||| |||||| | ||||| ||||| || || ||
Sbjct 411810 GCCATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATTACCCTTGAGGTCGAGTCG 411869
Query 27045 TCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGAT 27104
|| ||| |||| || | ||||| || || || ||||| || ||||| || || ||
Sbjct 411870 TCGGACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGAC 411929
Query 27105 CAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTAC 27164
||||||||| | || | ||| || || || | || ||| || || | ||| |||
Sbjct 411930 CAACAGCGTCTGATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTGAGCGACTAC 411989
Query 27165 AACATTCAAAAGGAG 27179
|||||||| ||||||
Sbjct 411990 AACATTCAGAAGGAG 412004
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434918356508160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |