Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01-
09] 8 sequences; 7,757,162 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq1 95.1 1e-14
>seq1
Length=1515123
Score = 95.1 bits (104), Expect = 1e-14
Identities = 149/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134
||||| || ||||||||||| || || || || || ||| ||| || || | || ||
Sbjct 1006164 CACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTAAGCGTGCGCCCATCCTC 1006105
Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194
||||| ||||| ||||| || | |||||| || || | || | || ||| ||||||
Sbjct 1006104 CAGCTGCTTGCCGGCAAAAATCAAACGCTGTTGATCCGGAGGAATGCCCTCCTTGTCCTG 1006045
Query 39195 GATTTTCTGTTTGAGCGTCGCCAC-CGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253
||| || ||||| ||| | || ||| || ||| || || || | ||||| | |
Sbjct 1006044 GATCTTGGCTTTGA-CGTTGTCAATCGTGTCCGACGATTCGACTTCGAGAGTGATCGTCT 1005986
Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
| || || || || || ||||||||||||||
Sbjct 1005985 TGCCGGTGAGAGTCTTGACAAAGATTTGCAT 1005955
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134
||||| || ||||||||||| || || || || || ||| ||| || || | || ||
Sbjct 1006392 CACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTAAGCGTGCGGCCATCCTC 1006333
Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194
||||| ||||| ||||| || |||||||| ||||| | || | | ||| ||||||
Sbjct 1006332 CAGCTGCTTGCCGGCAAAGATCAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTG 1006273
Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254
|| || |||| | | | ||| || |||||| || || | ||||| | ||
Sbjct 1006272 AATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTT 1006213
Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
|| || || || || ||||||||||||||
Sbjct 1006212 GCCGGTGAGAGTCTTGACAAAGATTTGCAT 1006183
Score = 89.7 bits (98), Expect = 4e-13
Identities = 148/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134
||||| || ||||||||||| || || || || || ||| ||| || || | || ||
Sbjct 1005936 CACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTAAGCGTGCGCCCATCCTC 1005877
Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194
||||| ||||| ||||| || |||||||| || || | || | | ||| ||||||
Sbjct 1005876 CAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGATCCGGAGGAATACCCTCCTTGTCCTG 1005817
Query 39195 GATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253
|| || |||| ||| | | | ||| || ||| || || || | ||||| | |
Sbjct 1005816 AATCTTGGCCTTGA-CGTTGTCAATCGTGTCCGACGATTCGACCTCGAGAGTGATCGTCT 1005758
Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
| || || || || |||||||||||||||||
Sbjct 1005757 TGCCAGTGAGGGTCTTAACAAAGATTTGCAT 1005727
Score = 89.7 bits (98), Expect = 4e-13
Identities = 148/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134
|||||| || | ||||||||| || || || || || ||| || || || | || ||
Sbjct 1006620 CACCAAGTGCAACGTGCTCTCCTTCTGAATGTTGTAGTCGCTGAGCGTGCGACCATCCTC 1006561
Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194
||||| ||||| ||||| || | |||||| ||||| | || | || ||| ||||||
Sbjct 1006560 CAGCTGCTTGCCAGCAAAAATCAAACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTG 1006501
Query 39195 GATTTTCTGTTTGAGCGTCGCCAC-CGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253
||| || |||| ||| | || ||| || ||| || || || | ||||| | |
Sbjct 1006500 GATCTTGGCCTTGA-CGTTGTCAATCGTGTCCGACGATTCGACCTCGAGAGTGATCGTCT 1006442
Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
| || || || || || ||||||||||||||
Sbjct 1006441 TGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1006411
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429545558119304
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |