Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01- 09] 8 sequences; 7,757,162 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq1 123 2e-23 >seq1 Length=1515123 Score = 123 bits (136), Expect = 2e-23 Identities = 143/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| || || ||||| |||||||| || || |||||||||||||| || || || | Sbjct 1005726 AATGCAAATCTTTGTTAAGACCCTCACTGGCAAGACGATCACTCTCGAGGTCGAATCGTC 1005785 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| |||| | | || || ||| ||||| || ||| | || || ||||| Sbjct 1005786 GGACACGATTGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGTATTCCTCCGGATCA 1005845 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||||| | || ||||||||||| || ||||| || | ||||| | |||| ||||| Sbjct 1005846 ACAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGGCGCACGCTTAGCGACTACAA 1005905 Query 23790 CATACAAAAAGAG 23802 ||| || || ||| Sbjct 1005906 CATTCAGAAGGAG 1005918 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || || || || ||||| || || ||||||||||||||||| || || || Sbjct 1005955 ATGCAAATCTTTGTCAAGACTCTCACCGGCAAGACGATCACTCTCGAAGTCGAATCGTCG 1006014 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | ||| || || ||||| || || | || || |||||| Sbjct 1006015 GACACGATTGACAACGTCAAAGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGATCAA 1006074 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||||| || ||||||||||| || ||||| || | ||||| | |||| |||||| Sbjct 1006075 CAGCGTTTGATTTTTGCCGGCAAGCAGCTGGAGGATGGGCGCACGCTTAGCGACTACAAC 1006134 Query 23791 ATACAAAAAGAG 23802 || || || ||| Sbjct 1006135 ATTCAGAAGGAG 1006146 Score = 107 bits (118), Expect = 1e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || || || || ||||| || || |||||||| ||||| || || || || Sbjct 1006183 ATGCAAATCTTTGTCAAGACTCTCACCGGCAAGACGATCACCCTCGAGGTCGAGTCGTCG 1006242 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | || | || | || ||||| || ||| | || || || || Sbjct 1006243 GACACGATTGACAATGTCAAGGCCAAGA-TTCAGGACAAGGAGGGTATTCCTCCGGACCA 1006301 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||||| | || ||||||||||| || ||||| || | ||||| | |||| ||||| Sbjct 1006302 ACAGCGTCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTTAGCGACTACAA 1006361 Query 23790 CATACAAAAAGAG 23802 ||| || || ||| Sbjct 1006362 CATTCAGAAGGAG 1006374 Score = 107 bits (118), Expect = 1e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || || || |||||||| || || |||||||||||||| || || || || Sbjct 1006411 ATGCAAATCTTTGTCAAGACCCTCACTGGCAAGACGATCACTCTCGAGGTCGAATCGTCG 1006470 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | || || || ||||| || || | || || || ||| Sbjct 1006471 GACACGATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 1006530 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||||| || ||||| ||||| || ||||| || | ||||| | |||| |||||| Sbjct 1006531 CAGCGTTTGATTTTTGCTGGCAAGCAGCTGGAGGATGGTCGCACGCTCAGCGACTACAAC 1006590 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGT 23819 || || || ||| ||| || || || || Sbjct 1006591 ATTCAGAAGGAGAGCACGTTGCACTTGGT 1006619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338009567044064