Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01-
09] 8 sequences; 7,757,162 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq1 123 2e-23
>seq1
Length=1515123
Score = 123 bits (136), Expect = 2e-23
Identities = 143/193 (74%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
|||||| || || ||||| |||||||| || || |||||||||||||| || || || |
Sbjct 1005726 AATGCAAATCTTTGTTAAGACCCTCACTGGCAAGACGATCACTCTCGAGGTCGAATCGTC 1005785
Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|||||| |||| | | || || ||| ||||| || ||| | || || |||||
Sbjct 1005786 GGACACGATTGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGTATTCCTCCGGATCA 1005845
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||||| | || ||||||||||| || ||||| || | ||||| | |||| |||||
Sbjct 1005846 ACAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGGCGCACGCTTAGCGACTACAA 1005905
Query 23790 CATACAAAAAGAG 23802
||| || || |||
Sbjct 1005906 CATTCAGAAGGAG 1005918
Score = 116 bits (128), Expect = 3e-21
Identities = 141/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || || || || || ||||| || || ||||||||||||||||| || || ||
Sbjct 1005955 ATGCAAATCTTTGTCAAGACTCTCACCGGCAAGACGATCACTCTCGAAGTCGAATCGTCG 1006014
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||| | | ||| || || ||||| || || | || || ||||||
Sbjct 1006015 GACACGATTGACAACGTCAAAGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGATCAA 1006074
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|||||||| || ||||||||||| || ||||| || | ||||| | |||| ||||||
Sbjct 1006075 CAGCGTTTGATTTTTGCCGGCAAGCAGCTGGAGGATGGGCGCACGCTTAGCGACTACAAC 1006134
Query 23791 ATACAAAAAGAG 23802
|| || || |||
Sbjct 1006135 ATTCAGAAGGAG 1006146
Score = 107 bits (118), Expect = 1e-18
Identities = 141/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || || || || || ||||| || || |||||||| ||||| || || || ||
Sbjct 1006183 ATGCAAATCTTTGTCAAGACTCTCACCGGCAAGACGATCACCCTCGAGGTCGAGTCGTCG 1006242
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | || | || | || ||||| || ||| | || || || ||
Sbjct 1006243 GACACGATTGACAATGTCAAGGCCAAGA-TTCAGGACAAGGAGGGTATTCCTCCGGACCA 1006301
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||||| | || ||||||||||| || ||||| || | ||||| | |||| |||||
Sbjct 1006302 ACAGCGTCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTTAGCGACTACAA 1006361
Query 23790 CATACAAAAAGAG 23802
||| || || |||
Sbjct 1006362 CATTCAGAAGGAG 1006374
Score = 107 bits (118), Expect = 1e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || || || || |||||||| || || |||||||||||||| || || || ||
Sbjct 1006411 ATGCAAATCTTTGTCAAGACCCTCACTGGCAAGACGATCACTCTCGAGGTCGAATCGTCG 1006470
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||| | | || || || ||||| || || | || || || |||
Sbjct 1006471 GACACGATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 1006530
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|||||||| || ||||| ||||| || ||||| || | ||||| | |||| ||||||
Sbjct 1006531 CAGCGTTTGATTTTTGCTGGCAAGCAGCTGGAGGATGGTCGCACGCTCAGCGACTACAAC 1006590
Query 23791 ATACAAAAAGAGTCCACATTACATTTAGT 23819
|| || || ||| ||| || || || ||
Sbjct 1006591 ATTCAGAAGGAGAGCACGTTGCACTTGGT 1006619
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338009567044064
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |