Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01- 09] 8 sequences; 7,757,162 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq5 152 1e-31 seq4 125 2e-23 seq1 113 1e-19 >seq5 Length=679138 Score = 152 bits (168), Expect = 1e-31 Identities = 167/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| ||||||||||| ||| || || |||| ||||| ||| || || Sbjct 231778 ACGCAGGCGCAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGT 231837 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| || |||||||| || || |||||||| || || ||||| Sbjct 231838 GCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGGATACC 231897 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||||||| ||||| ||||| || | ||||| || | Sbjct 231898 CTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCGAG 231957 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||||||||| || || | || || | |||||||||||| Sbjct 231958 GGTGATCGTCTTCCCGGTAAGGGTCTTGACGAACACTTGCAT 231999 Score = 96.9 bits (106), Expect = 8e-15 Identities = 118/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 || || | |||||||||||| || ||| || || |||| |||||| || || || Sbjct 141847 CGCAGACGCAGGACAAGGTGCAGCGTGCTCTCCTTCTGGATATTGTAGTCACTCAGGGTA 141788 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | ||||| || || ||||| || || ||||| || || || ||||| |||||||| || Sbjct 141787 CGTCCATCCTCCAGTTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGCGGAATGCCC 141728 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTC 225653 |||||||| |||||||| ||| || || ||| | | ||| Sbjct 141727 TCCTTGTCCTGGATCTTCGTCTTGACTGCGTCGTTAGCGTC 141687 >seq4 Length=1215465 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || |||||||| || ||| || || || | ||||| ||| || || | || || Sbjct 412024 AGCACAAGGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCGTCC 411965 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| || || |||||||| || || || || |||||||| Sbjct 411964 TCGAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCC 411905 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| ||||| ||||| || | || || || | || |||||| Sbjct 411904 TGGATCTTGGCCTTGACATTGTCGATCGTGTCCGACGACTCGACCTCAAGGGTAATCGTC 411845 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||| ||| || | ||| | |||||| Sbjct 411844 TTGCCAGTCAGAGTCTTGACGAAGATTTGCAT 411813 >seq1 Length=1515123 Score = 113 bits (124), Expect = 1e-19 Identities = 158/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || ||||| || ||| || || || | ||||| ||| | || Sbjct 1006404 ACGGAGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTAAGCGT 1006345 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| || || ||||| || || |||||||| || |||||||| Sbjct 1006344 GCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGTTGGTCCGGAGGAATACC 1006285 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| || ||||| ||| ||| || || ||||| || | || || || | Sbjct 1006284 CTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACCTCGAG 1006225 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||||||||||| || | ||| || | || | |||||| Sbjct 1006224 GGTGATCGTCTTGCCGGTGAGAGTCTTGACAAAGATTTGCAT 1006183 Score = 105 bits (116), Expect = 2e-17 Identities = 157/223 (70%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || ||||| || ||| || || || | ||||| ||| | || Sbjct 1005948 ACGGAGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTAAGCGT 1005889 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||| || |||||||| || || || || || || ||||| || || |||||||| Sbjct 1005888 GCGCCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGATCCGGAGGAATACC 1005829 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| || ||||| ||| || || || ||||| || | ||| || || | Sbjct 1005828 CTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCAATCGTGTCCGACGATTCGACCTCGAG 1005769 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 |||||||||||||| || | || || | || | ||||||| Sbjct 1005768 AGTGATCGTCTTGCCAGTGAGGGTCTTAACAAAGATTTGCATT 1005726 Score = 98.7 bits (108), Expect = 2e-15 Identities = 155/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || ||||| || ||| || || || | ||||| ||| | || Sbjct 1006176 ACGGAGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTAAGCGT 1006117 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||| || |||||||| || || || || | || ||||| || || ||||| || Sbjct 1006116 GCGCCCATCCTCCAGCTGCTTGCCGGCAAAAATCAAACGCTGTTGATCCGGAGGAATGCC 1006057 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| || || || || ||||| || | ||| || || | Sbjct 1006056 CTCCTTGTCCTGGATCTTGGCTTTGACGTTGTCAATCGTGTCCGACGATTCGACTTCGAG 1005997 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||||||||||| || | ||| || | || | |||||| Sbjct 1005996 AGTGATCGTCTTGCCGGTGAGAGTCTTGACAAAGATTTGCAT 1005955 Score = 96.9 bits (106), Expect = 8e-15 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 ||||| || |||||||| ||||| || || | || |||||||| || ||||| || ||| Sbjct 1006568 CCATCCTCCAGCTGCTTGCCAGCAAAAATCAAACGCTGTTGGTCCGGAGGAATGCCCTCC 1006509 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 ||||| |||||||| ||| || || || ||||| || | ||| || || | ||| Sbjct 1006508 TTGTCCTGGATCTTGGCCTTGACGTTGTCAATCGTGTCCGACGATTCGACCTCGAGAGTG 1006449 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||||||||| || | || || | || | |||||| Sbjct 1006448 ATCGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1006411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192531077765552