Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01- 09] 8 sequences; 7,757,162 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq1 214 4e-50 seq5 187 5e-42 seq4 158 3e-33 seq3 96.9 7e-15 seq8 91.5 3e-13 >seq1 Length=1515123 Score = 214 bits (236), Expect = 4e-50 Identities = 184/228 (81%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || ||||| || | |||||| || || || ||||||||||| Sbjct 1006182 ACCACCACGGAGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCT 1006123 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||||||| |||||||| || || || |||||||| |||||||| ||||| || || Sbjct 1006122 AAGCGTGCGCCCATCCTCCAGCTGCTTGCCGGCAAAAATCAAACGCTGTTGATCCGGAGG 1006063 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| |||||||| ||||| ||| | || || |||||||| | |||||| Sbjct 1006062 AATGCCCTCCTTGTCCTGGATCTTGGCTTTGACGTTGTCAATCGTGTCCGACGATTCGAC 1006003 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||||||||||||||||| || || | |||||| || || || ||||| Sbjct 1006002 TTCGAGAGTGATCGTCTTGCCGGTGAGAGTCTTGACAAAGATTTGCAT 1005955 Score = 201 bits (222), Expect = 2e-46 Identities = 182/229 (79%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || ||||| || | |||||| || || || ||||||||||| Sbjct 1005954 ACCACCACGGAGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCT 1005895 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||||||| |||||||| || || || |||||||| |||| ||| ||||| || || Sbjct 1005894 AAGCGTGCGCCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGATCCGGAGG 1005835 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||||||||| || ||||| || || ||| | || || |||||||| | |||||| Sbjct 1005834 AATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCAATCGTGTCCGACGATTCGAC 1005775 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 ||||||||||||||||| || || | |||||||| || || |||||| Sbjct 1005774 CTCGAGAGTGATCGTCTTGCCAGTGAGGGTCTTAACAAAGATTTGCATT 1005726 Score = 199 bits (220), Expect = 8e-46 Identities = 181/228 (79%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || ||||| || | |||||| || || || ||||||||||| Sbjct 1006410 ACCACCACGGAGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCT 1006351 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 |||||||||||||||||| || || || ||||||||||||| ||| |||||||| || Sbjct 1006350 AAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGTTGGTCCGGAGG 1006291 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||||||||| || ||||| || || || | || || |||||||| | ||||| Sbjct 1006290 AATACCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGAC 1006231 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||||||||| || || | |||||| || || || ||||| Sbjct 1006230 CTCGAGGGTGATCGTCTTGCCGGTGAGAGTCTTGACAAAGATTTGCAT 1006183 Score = 194 bits (214), Expect = 4e-44 Identities = 179/227 (79%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || || || |||| || |||||||| || || || ||||||||||| Sbjct 1006637 CCACCACGGAGACGCAGCACCAAGTGCAACGTGCTCTCCTTCTGAATGTTGTAGTCGCTG 1006578 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 |||||||| |||||||| || || || || ||||| |||||||| |||||||| ||| Sbjct 1006577 AGCGTGCGACCATCCTCCAGCTGCTTGCCAGCAAAAATCAAACGCTGTTGGTCCGGAGGA 1006518 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| |||||||| || || ||| | || || |||||||| | |||||| Sbjct 1006517 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATCGTGTCCGACGATTCGACC 1006458 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||||||||||||||| || || | ||||| || || || ||||| Sbjct 1006457 TCGAGAGTGATCGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1006411 >seq5 Length=679138 Score = 187 bits (206), Expect = 5e-42 Identities = 178/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || || || || | |||||| || || |||||||||||||| Sbjct 231772 ACCACCACGCAGGCGCAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCT 231831 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 |||||||| |||||||| || || || ||||| ||||||| || |||||||| || Sbjct 231832 CAGCGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGG 231891 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||| |||||||| || || || | ||||| ||||| |||| || || Sbjct 231892 GATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCAC 231951 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||||||||| || || | ||||| ||||| | ||||| Sbjct 231952 CTCGAGGGTGATCGTCTTCCCGGTAAGGGTCTTGACGAACACTTGCAT 231999 Score = 123 bits (136), Expect = 5e-23 Identities = 128/168 (76%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| ||||| || || || || || | |||||| || || ||||| ||||||||| Sbjct 141854 ACCACCGCGCAGACGCAGGACAAGGTGCAGCGTGCTCTCCTTCTGGATATTGTAGTCACT 141795 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || || |||||||| ||||| || || |||||||||| || || ||||| ||| Sbjct 141794 CAGGGTACGTCCATCCTCCAGTTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGCGG 141735 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTC 283039 ||| ||||||||||| |||||||| | || || | ||| ||| ||| Sbjct 141734 AATGCCCTCCTTGTCCTGGATCTTCGTCTTGACTGCGTCGTTAGCGTC 141687 >seq4 Length=1215465 Score = 158 bits (174), Expect = 3e-33 Identities = 164/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 282885 CGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCA 282944 ||||| || || || | ||||| || || || ||||||||||| |||||||| || Sbjct 412027 CGAAGCACAAGGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCG 411968 Query 282945 TCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTG 283004 ||||| || || || || || ||||||| ||| |||||||| || || ||||||||| Sbjct 411967 TCCTCGAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTG 411908 Query 283005 TCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATC 283064 || |||||||| || || || | ||||| |||||||| | ||||| || || || ||| Sbjct 411907 TCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCCGACGACTCGACCTCAAGGGTAATC 411848 Query 283065 GTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| || |||| |||||| ||||| || ||||| Sbjct 411847 GTCTTGCCAGTCAGAGTCTTGACGAAGATTTGCAT 411813 >seq3 Length=1365147 Score = 96.9 bits (106), Expect = 7e-15 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 316975 TCGGATCCGTCGAGGTCATGCTCAACATATGCAGTTTTCAGAATATCCTT---CGTCGGG 317031 || || ||||||||||| ||||| || || ||| | | | |||| || |||| Sbjct 397248 TCCGAGCCGTCGAGGTCGTGCTCGACGTAC-CAGGTGC--GGACCTCCTCAGGCGACGGG 397304 Query 317032 AACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCATTG 317091 || || || | ||| |||||| || || | |||||| |||||||| || | ||| || Sbjct 397305 AAGCCCTCGACCTGGCCGTTCTGGATGGCGCGCATCAGGGTCGACTTACCGGAACCGTTA 397364 Query 317092 GGGCCGCAAAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGAAGA 317151 | || || ||||| || || | || ||| || | || | ||||||| ||| Sbjct 397365 CGACCACAGAGACCGTAGCGGTGGCCACGCTTGAGGCGCAGGGTGGCGGTGTTCAGCAGA 397424 Query 317152 ATCTTACCACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201 ||||| |||| || ||||| ||||||| ||| | ||||||||||||||| Sbjct 397425 ATCTTGGCACCGTAGGCCAGCGAGAACTGACAGTTACACAGGTCCTCGCC 397474 >seq8 Length=447081 Score = 91.5 bits (100), Expect = 3e-13 Identities = 555/871 (64%), Gaps = 53/871 (6%) Strand=Plus/Minus Query 229535 CTTCCCTATTCAATACCCCGACCTCTGGGATATGTATAAGAAGGCGGTGGCAACCTTTTG 229594 |||||| || | |||| ||| ||||| | ||||| |||||||| | ||| | || || Sbjct 45849 CTTCCCGATCCGCTACCACGAGATCTGGCAGATGTACAAGAAGGCCGAGGCCTCGTTCTG 45790 Query 229595 GACCACGGAGGAAGTC--CCCCTAAATGCAGACGTCGTCGACTGGCGCGAGAAACTCAAC 229652 |||| | ||||| | || || | | ||| | ||||||| | | | ||| Sbjct 45789 GACCGCCGAGGAGATGGACCTCTCGAAG--GACCTGCACGACTGGGACCACCGCATGAAC 45732 Query 229653 GACGATGAACGCCATTTCATCAAGCACATTCTCGGGTTTTTTGCAGGTTCCGACGGTATC 229712 ||| |||| ||||| || | | ||| | || | || ||||| | ||| ||||||||| Sbjct 45731 GACAATGAGCGCCACTTTGTGAGCCACGTCCTGGCCTTCTTTGCTGCTTCGGACGGTATC 45672 Query 229713 GTGATGGAAAACTTGCAGACTAAC--TTCAGCGTCGAAGTAACGGTCCCAGAGGCACGGC 229770 || | || ||| || | | | | ||||||| ||| || || | | ||||| || Sbjct 45671 GTCAACGAGAACCTG--GTCGAGCGCTTCAGCGCCGAGGTGCAGGCCGCCGAGGCCCGCT 45614 Query 229771 AGTTTTACGCATACCAGACGTTCAATGAATCTGTTCATTCGGAACAGTATGCCCTTCTTA 229830 || |||| | ||||| | | || | || ||||| ||| | || || | Sbjct 45613 GCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCGGAGACGTACTCGCTCCTCA 45554 Query 229831 TTGACGCGCTCATTTCCGACGAGC--GAG-AGCGTGCCGAACTGTTCGACGCCATCGAAA 229887 | ||| || ||| ||| ||||| ||| |||||| || ||| |||| ||||| | Sbjct 45553 TCGACACGTACAT--CCG-CGAGCCGGAGCAGCGTGAGTTCCTCTTCAACGCTATCGAGA 45497 Query 229888 ACATCCCGGCGGTCCATAACAAAGCGCGTTGGGCTCAGAAGTGGCTGGAACCCAGTAAA- 229946 || || | ||| | | || || ||||| | | |||||| | | | | Sbjct 45496 CGATTCCCGTCGTCAAGCAGAAGGCCGAGTGGGCCCTGC----GCTGGATCTCGGACAGG 45441 Query 229947 ------TCGTTTGCAGAGCGTCTCGTCGCGTGGGTGTGCGTTGAGGGTATTCTGTTCTCC 230000 ||||| | ||||| || || || | | ||| ||||| || | ||||| Sbjct 45440 CGCGCCTCGTTCTCGGAGCGCCTTGTGGCCTTTGCCGCCGTCGAGGGCATCTTTTTCTCG 45381 Query 230001 GGGAGTTTCTGCGCCATCTTTTGGCTACGCAACAAGGGCG---TCATGCCCGGGCTCGGT 230057 || || | ||||||| ||||| ||| ||| ||| ||||||| || || || Sbjct 45380 GGCTCGTTTGCCTCCATCTTCTGGCT---CAAGAAGCGCGGCCTCATGCCTGGTCT--GT 45326 Query 230058 C--TGTCGAACGAATTCATCAGCAGGGACGAAGGTCTTCACCAGCAATTTGGCGAGGTCT 230115 | | |||||||| ||||| | ||||| || || ||| | |||| | |||| Sbjct 45325 CGTTCTCGAACGAGCTCATCTCGCGCGACGAGGGCCTGCACACCGACTTTGCCT--GTCT 45268 Query 230116 TGTATTCGAAGCTAAAT-AACAAACT-----ACCTTTCGAAACGGTGAAACAAATCGTCA 230169 | ||| ||| | | || || | ||| | || |||||||| | ||| ||| Sbjct 45267 CCTGTTC--AGCCACCTGAAGAAGCGTGCGCACCCT--GACACGGTGAACCGCATCATCA 45212 Query 230170 CAGAAGTAGTTGCAAATGAAAAGGAGTTCATTTG--CGACGCTATTCCT-TGCCGTCTTA 230226 | || | || || | ||| |||| || |||| |||||| | ||| | || || | Sbjct 45211 CCGAGGCTGTGGCCATTGAGCAGGACTT--TTTGACCGACGCCTTGCCTGTTTCG-CTGA 45155 Query 230227 TCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCG 230286 |||||||||| || |||||| | || || ||||| || || || || ||| | ||| Sbjct 45154 TCGGCATGAACGCGCGCCTCATGTGCCAGTACATCGAGTTTGTGGCGGACCGTCTGCTCG 45095 Query 230287 TGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCA 230346 | || || || ||| || ||||| | ||||||||||| ||||||||| || Sbjct 45094 TCAACCTCGGCAACCCGAAGCACTACAACTCGACGAACCCCTTCGACTTTATGGAGAACA 45035 Query 230347 TTTCACTCCAGGGGAAAACTAACTTCTTCGA 230377 | || |||||||| || | ||||| ||||| Sbjct 45034 TCTCGCTCCAGGGCAAGTCGAACTTTTTCGA 45004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046739092709232