Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149165.1_202017-01-
09] 8 sequences; 7,873,153 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq8 504 7e-138
seq1 136 4e-27
seq5 134 1e-26
seq4 127 2e-24
>seq8
Length=440579
Score = 504 bits (558), Expect = 7e-138
Identities = 636/865 (74%), Gaps = 19/865 (2%)
Strand=Plus/Minus
Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635
|||||||||||| |||||| || || || | ||||| || | |||| ||
Sbjct 42631 GAGCCGCTGCTGAAGGAGAACAAGTCGCGCTTTGTCCTCTTCCCGATCCGCTACCACGAG 42572
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| |||||||| ||||||||||| ||||||||||||| ||||||| |||||||
Sbjct 42571 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCGTTCTGGACCGCCGAGGAGATGGACCTC 42512
Query 116696 TCCAAGGACACGAGCGACTGGGAGC---GCTTGAACGACAACGAGCGCCATTTCATCAAG 116752
|| |||||| | ||||||||| | || |||||||||| |||||||| || | |
Sbjct 42511 TCGAAGGACTTGCACGACTGGGACCACCGCATGAACGACAATGAGCGCCACTTTGTGAGC 42452
Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812
||||| |||||||| || || || ||||| |||||||||||||| |||||||||||
Sbjct 42451 CACGTCCTGGCCTTCTTTGCTGCTTCGGACGGTATCGTCAACGAGAACCTGGTCGAGCGC 42392
Query 116813 TTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871
||| || | | ||||||||| |||||||| || |||||||||||||| |||||| ||
Sbjct 42391 TTCAGCGCCG-AGGTGCAGGCCGCCGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGAT 42333
Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGA 116931
||||||| | |||||||| | ||| ||| |||||||||||||||| | ||| ||||
Sbjct 42332 GGAGAACATCCACTCGGAGACGTACTCGCTCCTCATCGACACGTACATCCGCGAGCCGGA 42273
Query 116932 GGAGAAGCTCCGTTTGT--TGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCC 116989
| || | |||| | | ||||| ||||||||||| || |||||| ||||||||
Sbjct 42272 GCAGCG--TGAGTTTCTCTTCAACGCTATCGAGACGATCCCCGTCGTCAAGCAGAAGGCC 42215
Query 116990 GAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCC 117049
|||||||| |||||||||||| | | ||| ||| | ||| |||||||| ||||||
Sbjct 42214 GAGTGGGCCCTGCGCTGGATCTCGGACAGGCGCGCCTCGTTCTCGGAGCGCCTTGTGGCC 42155
Query 117050 TTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAG 117109
|| || |||||||||||| |||| || |||||| || ||| |||| || |||||||||
Sbjct 42154 TTTGCCGCCGTCGAGGGCATCTTTTTCTCGGGCTCGTTTGCCTCCATCTTCTGGCTCAAG 42095
Query 117110 AAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGT 117169
|| |||||||||||||| || ||| | ||| |||||||||||||| | || |||||
Sbjct 42094 AAGCGCGGCCTCATGCCTGGTCTGTCGTTCTCGAACGAGCTCATCTCGCGCGATGAGGGC 42035
Query 117170 CTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCG 117229
||||| ||||||||||||| | ||||||| || || | || || |||| |
Sbjct 42034 CTGCACACCGACTTTGCCTGTCTCCTGTTCAGCCACCTGAAGAAG----CGTGCGCACCC 41979
Query 117230 CGCGTCAGGGA----GATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGA 117285
| ||| || ||| ||||||| || || ||||| |||||| ||| | || ||
Sbjct 41978 TGACACAGTGAACCGCATCATCACCGAGGCTGTGGCCATTGAGCAGGACTTTTTGACTGA 41919
Query 117286 AGCGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGT 117344
|| |||| || ||| | || | || ||| | |||| || ||||| ||||
Sbjct 41918 CGCCTTGCCTGTTTCGCTGATCGGCATGAA-CGCGCGCCTCATGTGCCAGTACATTGAGT 41860
Query 117345 TCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACC 117404
| || || ||| | ||||| || | || | | | | |||||||||||| || | ||||
Sbjct 41859 TTGTGGCGGACCGCCTGCTCGTCAACCTCGGCAACCCGAAGCACTACAACTCGACGAACC 41800
Query 117405 CGCTGGACTTTATGAACCTCATCTC 117429
| | ||||||||| | ||||||
Sbjct 41799 CCTTCGACTTTATGGAGAACATCTC 41775
>seq1
Length=1509180
Score = 136 bits (150), Expect = 4e-27
Identities = 162/217 (75%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
||||||||| || || || || ||||| ||||| || |||||| |||| ||||| | |
Sbjct 1005637 AATGCAAATTTTTGTTAAGACCCTCACTGGCAAGACGATCACCCTCGAGGTCGAGTCGTC 1005696
Query 40749 CGACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807
|||| | || || | |||||| || || | ||||| |||||||| || ||||||
Sbjct 1005697 GGACACGATTGACAATG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACC 1005755
Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867
| || || || || | || ||||| |||||||| || | ||||| || | ||||||||
Sbjct 1005756 AACAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTTAGCGACTACA 1005815
Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
|||| ||||||||| ||||||||| | ||| ||||
Sbjct 1005816 ACATTCAGAAGGAGAGCACGCTGCACTTGGTGCTGCG 1005852
>seq5
Length=703599
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||| | ||||| || || || || || || || |||||| |||| || || | ||
Sbjct 232052 ATGCAAGTGTTCGTCAAGACCCTTACCGGGAAGACGATCACCCTCGAGGTGGAGTCTTCC 231993
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | |||| || || | ||||| ||||| ||||| |||||||
Sbjct 231992 GACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAA 231933
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || || |||| ||| ||||| |||||||| || | ||||| || | ||||||||||
Sbjct 231932 CAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACGCTGAGCGACTACAAC 231873
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
|||||||||||| |||||| || || ||| ||||| || | || ||
Sbjct 231872 ATCCAGAAGGAGAGCACGCTCCACCTTGTGCTGCGCCTGCGTGGTGG 231826
Score = 104 bits (114), Expect = 2e-17
Identities = 96/122 (79%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842
||||| |||||||| || |||||||||| || || |||| |||||||| || |||||
Sbjct 141916 GACAAGGAGGGCATTCCGCCGGACCAGCAGCGCCTGATCTTTGCGGGCAAGCAACTGGAG 141975
Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902
|| | || ||||| | |||||||| |||||||||||| ||||||||| || || ||
Sbjct 141976 GATGGACGTACCCTGAGTGACTACAATATCCAGAAGGAGAGCACGCTGCACCTTGTCCTG 142035
Query 40903 CG 40904
||
Sbjct 142036 CG 142037
>seq4
Length=1203039
Score = 127 bits (140), Expect = 2e-24
Identities = 154/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || || || ||||| || || ||| | || ||||| | |
Sbjct 405942 ATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATTACCCTTGAGGTCGAGTCGTCG 406001
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | |||||| || || | ||||| ||||||||||| |||||||
Sbjct 406002 GACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAA 406061
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || || |||| ||| || || ||||| || |||| ||||| || | ||||||||||
Sbjct 406062 CAGCGTCTGATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTGAGCGACTACAAC 406121
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899
|| ||||||||| ||| ||||| || |||
Sbjct 406122 ATTCAGAAGGAGAGCACCCTGCACCTTGTG 406151
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515219148478080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |