Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149165.1_202017-01- 09] 8 sequences; 7,873,153 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq8 504 7e-138 seq1 136 4e-27 seq5 134 1e-26 seq4 127 2e-24 >seq8 Length=440579 Score = 504 bits (558), Expect = 7e-138 Identities = 636/865 (74%), Gaps = 19/865 (2%) Strand=Plus/Minus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 |||||||||||| |||||| || || || | ||||| || | |||| || Sbjct 42631 GAGCCGCTGCTGAAGGAGAACAAGTCGCGCTTTGTCCTCTTCCCGATCCGCTACCACGAG 42572 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||||||||| ||||||||||||| ||||||| ||||||| Sbjct 42571 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCGTTCTGGACCGCCGAGGAGATGGACCTC 42512 Query 116696 TCCAAGGACACGAGCGACTGGGAGC---GCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 || |||||| | ||||||||| | || |||||||||| |||||||| || | | Sbjct 42511 TCGAAGGACTTGCACGACTGGGACCACCGCATGAACGACAATGAGCGCCACTTTGTGAGC 42452 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| |||||||| || || || ||||| |||||||||||||| ||||||||||| Sbjct 42451 CACGTCCTGGCCTTCTTTGCTGCTTCGGACGGTATCGTCAACGAGAACCTGGTCGAGCGC 42392 Query 116813 TTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| || | | ||||||||| |||||||| || |||||||||||||| |||||| || Sbjct 42391 TTCAGCGCCG-AGGTGCAGGCCGCCGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGAT 42333 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGA 116931 ||||||| | |||||||| | ||| ||| |||||||||||||||| | ||| |||| Sbjct 42332 GGAGAACATCCACTCGGAGACGTACTCGCTCCTCATCGACACGTACATCCGCGAGCCGGA 42273 Query 116932 GGAGAAGCTCCGTTTGT--TGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCC 116989 | || | |||| | | ||||| ||||||||||| || |||||| |||||||| Sbjct 42272 GCAGCG--TGAGTTTCTCTTCAACGCTATCGAGACGATCCCCGTCGTCAAGCAGAAGGCC 42215 Query 116990 GAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCC 117049 |||||||| |||||||||||| | | ||| ||| | ||| |||||||| |||||| Sbjct 42214 GAGTGGGCCCTGCGCTGGATCTCGGACAGGCGCGCCTCGTTCTCGGAGCGCCTTGTGGCC 42155 Query 117050 TTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAG 117109 || || |||||||||||| |||| || |||||| || ||| |||| || ||||||||| Sbjct 42154 TTTGCCGCCGTCGAGGGCATCTTTTTCTCGGGCTCGTTTGCCTCCATCTTCTGGCTCAAG 42095 Query 117110 AAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGT 117169 || |||||||||||||| || ||| | ||| |||||||||||||| | || ||||| Sbjct 42094 AAGCGCGGCCTCATGCCTGGTCTGTCGTTCTCGAACGAGCTCATCTCGCGCGATGAGGGC 42035 Query 117170 CTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCG 117229 ||||| ||||||||||||| | ||||||| || || | || || |||| | Sbjct 42034 CTGCACACCGACTTTGCCTGTCTCCTGTTCAGCCACCTGAAGAAG----CGTGCGCACCC 41979 Query 117230 CGCGTCAGGGA----GATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGA 117285 | ||| || ||| ||||||| || || ||||| |||||| ||| | || || Sbjct 41978 TGACACAGTGAACCGCATCATCACCGAGGCTGTGGCCATTGAGCAGGACTTTTTGACTGA 41919 Query 117286 AGCGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGT 117344 || |||| || ||| | || | || ||| | |||| || ||||| |||| Sbjct 41918 CGCCTTGCCTGTTTCGCTGATCGGCATGAA-CGCGCGCCTCATGTGCCAGTACATTGAGT 41860 Query 117345 TCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACC 117404 | || || ||| | ||||| || | || | | | | |||||||||||| || | |||| Sbjct 41859 TTGTGGCGGACCGCCTGCTCGTCAACCTCGGCAACCCGAAGCACTACAACTCGACGAACC 41800 Query 117405 CGCTGGACTTTATGAACCTCATCTC 117429 | | ||||||||| | |||||| Sbjct 41799 CCTTCGACTTTATGGAGAACATCTC 41775 >seq1 Length=1509180 Score = 136 bits (150), Expect = 4e-27 Identities = 162/217 (75%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 ||||||||| || || || || ||||| ||||| || |||||| |||| ||||| | | Sbjct 1005637 AATGCAAATTTTTGTTAAGACCCTCACTGGCAAGACGATCACCCTCGAGGTCGAGTCGTC 1005696 Query 40749 CGACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 |||| | || || | |||||| || || | ||||| |||||||| || |||||| Sbjct 1005697 GGACACGATTGACAATG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACC 1005755 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 | || || || || | || ||||| |||||||| || | ||||| || | |||||||| Sbjct 1005756 AACAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTTAGCGACTACA 1005815 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||| ||||||||| ||||||||| | ||| |||| Sbjct 1005816 ACATTCAGAAGGAGAGCACGCTGCACTTGGTGCTGCG 1005852 >seq5 Length=703599 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||| | ||||| || || || || || || || |||||| |||| || || | || Sbjct 232052 ATGCAAGTGTTCGTCAAGACCCTTACCGGGAAGACGATCACCCTCGAGGTGGAGTCTTCC 231993 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| || || | ||||| ||||| ||||| ||||||| Sbjct 231992 GACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAA 231933 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| ||||| |||||||| || | ||||| || | |||||||||| Sbjct 231932 CAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACGCTGAGCGACTACAAC 231873 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| |||||| || || ||| ||||| || | || || Sbjct 231872 ATCCAGAAGGAGAGCACGCTCCACCTTGTGCTGCGCCTGCGTGGTGG 231826 Score = 104 bits (114), Expect = 2e-17 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| |||||||| || |||||||||| || || |||| |||||||| || ||||| Sbjct 141916 GACAAGGAGGGCATTCCGCCGGACCAGCAGCGCCTGATCTTTGCGGGCAAGCAACTGGAG 141975 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 || | || ||||| | |||||||| |||||||||||| ||||||||| || || || Sbjct 141976 GATGGACGTACCCTGAGTGACTACAATATCCAGAAGGAGAGCACGCTGCACCTTGTCCTG 142035 Query 40903 CG 40904 || Sbjct 142036 CG 142037 >seq4 Length=1203039 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || ||||| || || ||| | || ||||| | | Sbjct 405942 ATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATTACCCTTGAGGTCGAGTCGTCG 406001 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | |||||| || || | ||||| ||||||||||| ||||||| Sbjct 406002 GACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAA 406061 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| || || ||||| || |||| ||||| || | |||||||||| Sbjct 406062 CAGCGTCTGATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTGAGCGACTACAAC 406121 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 || ||||||||| ||| ||||| || ||| Sbjct 406122 ATTCAGAAGGAGAGCACCCTGCACCTTGTG 406151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515219148478080