Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149165.1_202017-01- 09] 8 sequences; 7,873,153 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq8 136 8e-27 seq1 95.1 3e-14 >seq8 Length=440579 Score = 136 bits (150), Expect = 8e-27 Identities = 411/631 (65%), Gaps = 19/631 (3%) Strand=Plus/Plus Query 248818 TACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAG 248877 ||| | ||||||| ||||| ||||| ||| || || || || || |||||||| Sbjct 54092 TACAACTTCTTTGGCTTCAAGACGCTCGAGCGCTCCTACCTGCTGCGGATCAATGGCAAG 54151 Query 248878 ATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGAC 248937 | | ||| || ||||||||| | ||||| || || ||||| || ||| || ||| Sbjct 54152 GTTGCGGAGCGCCCCCAGCACATGCTCATGCGCGTCGCCGTCGGCATCCACGGCGAGGAC 54211 Query 248938 ATAGAGAGCGTGCTCGAGACGTACACCGGAATG--AGTGAACGCTGGATGACACATGCCA 248995 | | ||||| | |||||||||||| | ||| | ||| || | ||||| || Sbjct 54212 GTGGCGAGCGCGATCGAGACGTACAACTACATGTCCGAGAAGGC--CTTTACACACGCGT 54269 Query 248996 CACCGACGCTCTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTG 249055 | ||||| || ||||| ||||| || |||| || || |||||||| ||| | Sbjct 54270 CGCCGACCCTGTTCAATGCCGGCACGCCCAACCCCCAAATGTCGTCGTGCTTCCTTGTGA 54329 Query 249056 CCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGAC---GGCGAAGA 249112 ||| | |||||||| |||| || || || |||||||| | |||| |||| || Sbjct 54330 GTATGAAGGACGACTCGATCGAGGGTATATACGACACGCTCA---AGACCTGTGCGATGA 54386 Query 249113 TTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGT 249172 | || || ||||| || ||||| | || |||||| || |||| ||| |||| Sbjct 54387 TCAGCAAGACGGCCGGCGGTATTGGTCTGAACATCCACAACATTCGTGCGACGGGCTCGT 54446 Query 249173 ACATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGT 249232 ||||| || || || || || || | ||||| || ||| | || || | | Sbjct 54447 ACATCGCCGGCACGAACGGTGTGAGCAACGGTATTGTGCCCATGCTCCGCGTGTACAACA 54506 Query 249233 CCACCGCCAGGTTCATCAACCAGGCCGG------GCGCCGAAAGGGGTCGTTCGCCATGT 249286 ||| || | | | | |||||| ||| ||||| ||| | || || || | Sbjct 54507 ACACGGCGCGCTACGTGGACCAGGGCGGCAACAAGCGCC---CGGGCGCCTTTGCGATCT 54563 Query 249287 ATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCA 249346 | |||| ||||||| | || | || || || | || || |||||| | |||| Sbjct 54564 ACCTGGAGCCGTGGCACTCGGACGTTTTTGAATTTATTGATCTGCGCAAGAACCATGGCA 54623 Query 249347 ACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGC 249406 | ||| || | ||||| ||||| ||| | |||||| | |||| ||||||||| Sbjct 54624 AGGAGGAAGTGCGCGCGCGCGACCTGTTCCTGGCGCTGTGGATTCCCGATCTGTTCATGC 54683 Query 249407 GCCGCGTCAAGGCCGACGGCGATTGGACGCT 249437 |||| ||| | ||||||| ||| |||| Sbjct 54684 GCCGTGTCGAACAGAACGGCGACTGGTCGCT 54714 >seq1 Length=1509180 Score = 95.1 bits (104), Expect = 3e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 115402 ATCGCACATCTGCTCTGAATCGGTTCGATGATTTTGGTGGAGTTGTTGCAGACTATGATG 115461 |||||||| | |||||| ||||| || ||||| ||| | || | |||||| | | | | Sbjct 518686 ATCGCACAGCGGCTCTGGATCGGCTCAATGATCTTGTTCGACTGGTTGCACGCAAAGCAG 518745 Query 115462 AACCGCGTCGTGCTCGAGTAAACATCCATGATCCGTCGCAGCGCCTGGAAAGCACCAGGT 115521 || |||||||| || ||| | ||||| | || ||||||||||| ||||| || Sbjct 518746 AAGCGCGTCGTTGGCGCGTAGATCTCCATCGTGCGACGCAGCGCCTGCTGCGCACCCGGC 518805 Query 115522 GTCATCGAGTCTGCCTCGTCGAGAACGACAATCTT 115556 ||||| ||| ||||||||||||| || ||||| Sbjct 518806 GTCATGCTGTCCGCCTCGTCGAGAATGATGATCTT 518840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073766289938944