Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149165.1_202017-01-
09] 8 sequences; 7,873,153 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq1 96.9 3e-15
seq5 84.2 2e-11
>seq1
Length=1509180
Score = 96.9 bits (106), Expect = 3e-15
Identities = 152/215 (71%), Gaps = 2/215 (1%)
Strand=Plus/Minus
Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCT 48575
||| || || || ||||||||||| ||||||||||| || || || || || | ||||
Sbjct 1005847 CACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTC-GCTAAGCGTGCGGCCATCCT 1005789
Query 48576 CCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCA 48635
|||||||||| ||| | |||| | |||||| || ||| || | | |||||||||
Sbjct 1005788 CCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCT 1005729
Query 48636 TAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTT 48695
|| || ||||| | | || || || | ||||| ||||| || || || |
Sbjct 1005728 GGATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGTCT 1005669
Query 48696 TACCGGTGAGAGTTTTCACAAAAATCTGCATCGTG 48730
| || ||||| || || |||||||| ||||| |||
Sbjct 1005668 TGCCAGTGAGGGTCTTAACAAAAATTTGCATTGTG 1005634
Score = 86.0 bits (94), Expect = 5e-12
Identities = 147/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCT 48575
||| || || || ||||||||||| |||||||| || || || || || || | ||||
Sbjct 1006075 CACCAAGTGTAGCGTGCTCTCCTTCTGAATGTTATAGTC-GCTAAGCGTGCGGCCATCCT 1006017
Query 48576 CCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCA 48635
|||||||||| ||| | |||| | |||||| || ||| || | | |||||||||
Sbjct 1006016 CCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCT 1005957
Query 48636 TAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTT 48695
|| || ||||| | | || || || | ||||| ||||| || || || |
Sbjct 1005956 GGATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGTCT 1005897
Query 48696 TACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
| || ||||| || || ||||| || |||||
Sbjct 1005896 TGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1005866
>seq5
Length=703599
Score = 84.2 bits (92), Expect = 2e-11
Identities = 161/234 (69%), Gaps = 4/234 (2%)
Strand=Plus/Plus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTG 48582
|| || ||||||||||| || |||||||| || || | || || | |||||||||||
Sbjct 231850 TGGAGCGTGCTCTCCTTCTGGATGTTGTAGTC-GCTCAGCGTGCGACCATCCTCCAGCTG 231908
Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642
||| ||| || | || | ||||| || ||| || | || ||||||||| || ||
Sbjct 231909 CTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTT 231968
Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702
||| | | | | || || |||| ||||||| ||||| || || || || |||||
Sbjct 231969 GGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTTCCCGGT 232028
Query 48703 GAGAGTTTTCACAAAAATCTGCATCGTGTCT--TGATCGAAGAAAGAGTGATGT 48754
|| || || || || | ||||| || || | | | || |||| ||| |||
Sbjct 232029 AAGGGTCTTGACGAACACTTGCATGGTAACTGCTAACCAAACAAAGTGTGGTGT 232082
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421251158928008
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |