Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149165.1_202017-01- 09] 8 sequences; 7,873,153 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq1 102 7e-17 seq5 87.8 2e-12 seq8 84.2 2e-11 >seq1 Length=1509180 Score = 102 bits (112), Expect = 7e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || || | ||||| || |||| ||| |||| |||||| | Sbjct 1005866 ATGCAAATCTTTGTCAAGACCCTCACTGGCAAGACGATCACCCTCGAGGTCGAGTCGTCG 1005925 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | ||||| ||||| ||||| || ||||| ||||| || ||| Sbjct 1005926 GACACGATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 1005985 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | ||||||| | ||||||||| || || |||| | | | | ||||| |||||| Sbjct 1005986 CAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTTAGCGACTATAAC 1006045 Query 24171 ATTCAAAAAGA 24181 ||||| || || Sbjct 1006046 ATTCAGAAGGA 1006056 >seq5 Length=703599 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||||||||| || || || | || || || |||| ||| |||| || ||| | | Sbjct 232052 ATGCAAGTGTTCGTCAAGACCCTTACCGGGAAGACGATCACCCTCGAGGTGGAGTCTTCC 231993 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| |||||| | || || ||||| ||||| || || || ||||| || ||| Sbjct 231992 GACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAA 231933 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | ||||| | || ||||||||| || || |||| | | | ||||| || ||| Sbjct 231932 CAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACGCTGAGCGACTACAAC 231873 Query 24171 ATTCAAAAAGA 24181 || || || || Sbjct 231872 ATCCAGAAGGA 231862 >seq8 Length=440579 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 104611 TCaaaaaaaTTAGTCTTGCCCTCCAGAGAAATATTATTCATAAATTCGAAAGGATTCAAA 104670 || ||||| || | |||||||| || || || || | |||||| ||||| || ||| Sbjct 41748 TCGAAAAAGTTCGACTTGCCCTGGAGCGAGATGTTCTCCATAAAGTCGAAGGGGTTCGTC 41807 Query 104671 GTCTTAAAATATTTTTCGTAGCCAAGCTCGATCAACAGTCGATCCGCCACAAATTCGATG 104730 | || | | || || ||| || | || | ||| || ||||||||||| || ||| Sbjct 41808 GAGTTGTAGTGCTTCGGGTTGCCGAGGTTGACGAGCAGGCGGTCCGCCACAAACTCAATG 41867 Query 104731 TACTCGCACATAGAATGTGCATTCATGCCCAGCATTGCGACGGGTAAAGCGTTAGTaaaa 104790 |||| |||||| | || |||||||| | || | || || || |||| ||| ||| Sbjct 41868 TACTGGCACATGAGGCGCGCGTTCATGCCGATCAGCGAAACAGGCAAGGCGTCAGTCAAA 41927 Query 104791 aaaTCTTTCTCGATGTCCACGGCTTC 104816 || || | ||| ||| |||| || || Sbjct 41928 AAGTCCTGCTCAATGGCCACAGCCTC 41953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935958081240