Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149165.1_202017-01- 09] 8 sequences; 7,873,153 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq8 223 3e-53 seq4 129 6e-25 seq5 123 2e-23 seq1 116 3e-21 >seq8 Length=440579 Score = 223 bits (246), Expect = 3e-53 Identities = 354/503 (70%), Gaps = 15/503 (3%) Strand=Plus/Minus Query 46100 AGAAAACCGACTGGGCGATGAAGTGGATCA---ACAGCAGCACCGCGACTTTCGCCGAGC 46156 |||| |||| ||||| || |||||| |||| || || || ||| | |||| Sbjct 42222 AGAAGGCCGAGTGGGCCCTGCGCTGGATCTCGGACAGGCGCGCCTCG---TTCTCGGAGC 42166 Query 46157 GTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCT 46216 | | ||||||||||| || |||||| ||||||| || ||| |||||| |||||| Sbjct 42165 GCCTTGTGGCCTTTGCCGCCGTCGAGGGCATCTTTTTCTCGGGCTCGTTTGCCTCCATCT 42106 Query 46217 TTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGC 46276 | | |||| | ||| ||||||| || ||| |||| |||||||| || |||| Sbjct 42105 TCTGGCTCAAGAAGCGCGGCCTCATGCCTGGTCTGTCGTTCTCGAACGAGCTCATCTCGC 42046 Query 46277 GCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACTCGCGTGCACGACA 46336 |||| ||||||||||| || |||||||| |||||| || | || | | || | | Sbjct 42045 GCGATGAGGGCCTGCACACCGACTTTGCCTGTCTC--CTGTT-CAGCCACCTGAAG---A 41992 Query 46337 AGCTTGCGCCC---GACACCGTGCTGAGCATGTTCAAGGAGGCGGTGGCCATTGAGAAGG 46393 ||| ||||| | ||||| ||| |||| ||| ||||| |||||||||||| ||| Sbjct 41991 AGCGTGCGCACCCTGACACAGTGAACCGCATCATCACCGAGGCTGTGGCCATTGAGCAGG 41932 Query 46394 AGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAGTCAATGTGCG 46453 | ||||| || | ||| |||| | | | ||| | ||||||||||| | |||||| Sbjct 41931 ACTTTTTGACTGACGCCTTGCCTGTTTCGCTGATCGGCATGAACGCGCGCCTCATGTGCC 41872 Query 46454 ACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCCGAAGCATTTTC 46513 | ||||| |||||||| |||||||| |||||||| | || | | |||||||| | Sbjct 41871 AGTACATTGAGTTTGTGGCGGACCGCCTGCTCGTCAACCTCGGCAACCCGAAGCACTACA 41812 Query 46514 ACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAACTAATTTTT 46573 || || || || || || |||||| | |||||||| || ||||||| | || |||| Sbjct 41811 ACTCGACGAACCCCTTCGACTTTATGGAGAACATCTCGCTCCAGGGCAAGTCGAACTTTT 41752 Query 46574 TCGAAAAGCGCGTCGGCGAGTAT 46596 |||| ||||| | ||| ||| Sbjct 41751 TCGAGCGCCGCGTTGCCGACTAT 41729 Score = 183 bits (202), Expect = 3e-41 Identities = 940/1459 (64%), Gaps = 55/1459 (4%) Strand=Plus/Minus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||| ||||| ||||| ||||| | |||||| |||| || | ||| |||| | || Sbjct 55587 TTGACCACCTGGAACTCACCGGCAAGCACACGGCGCATGTAAATGTTGCTCGTGTACGGC 55528 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 ||||| ||||||| ||| ||||| ||| || | || || |||||| ||||| | Sbjct 55527 TCAAAGCACTCGTTGAAGCCAAGGATCTGACTCGTGGAGGCCGTCGGCATGGGCGCCATC 55468 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | | || |||||||| ||||||| || | | |||| |||| |||| ||||| Sbjct 55467 AGCAGCGAGTTGCGCAGACCGTGCTGGGCAATCTTTGCCTTGAGCGAGGCCCAGTCCCAC 55408 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297 || | |||| | || ||||||||||||||||| | ||||| ||| |||||| Sbjct 55407 AGGTCCGACGGCGTGCGGTTCCACATGTCGTACTGCAGGAGGCCCTGCGAGGCAGGGCTG 55348 Query 145298 CCTTGAAAGGAACTGTAACTGCCCCAAGTTTTG--GCGAGCTCGCAACTCGCCTCCAGAG 145355 || | | | ||| || ||| || | || |||||||| || ||||| || Sbjct 55347 CCCTCGTACGTCTCGTA--TGTGCCATATTCGGCCGCCAGCTCGCAGCTGCGCTCCA-AG 55291 Query 145356 CGCCGAA--ATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTC 145413 |||| | ||||| ||||| || ||| || ||||| ||| || | ||| || Sbjct 55290 -GCCGCATGGTAAATGGTCTCAAAGATCTGCACATTCAGCAGGCGCGCCTCCTGGCTGTC 55232 Query 145414 GTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGG 145473 | |||| || || | | || |||||||| || ||||| | || | |||||||| Sbjct 55231 GAACGGATAGCCCATGATCATGAACGCATCGGCAAGGCCCTGGACACCGATACCGATGGG 55172 Query 145474 CCGATGTTTCATGTT-GCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATAA 145532 || || |||||| | | | | || ||| | ||| || || ||||| | Sbjct 55171 GCGGTGCCGCATGTTCGAGCGACGT-GCACTCTCCACAGGGTAGTAGTTGATATCGATGA 55113 Query 145533 TTTTATTCAAGTT-TCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAA- 145590 | |||| ||| | |||| || || || | | || ||| || |||| | Sbjct 55112 TGCGGTTCAGGTTCTTGCAC-ACCACTTTCGACACGTCGTGCAGGCGTTGGAAGTTGTAT 55054 Query 145591 ----CCGAGCCTCGTCAACGACCAC-ACAGCTATTGACGGCG--ATCGACGCCAAATTAC 145643 |||| | | | | || | | | | | | ||| |||||||||| || | Sbjct 55053 GTCTTCGAGGCAC--CGGTGCCCTCAATAAACGTCGGCAGCGCAATCGACGCCAGGTTGC 54996 Query 145644 AAACTGCCGTCTCCT-CGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACAT 145702 | || || ||||| | ||||| |||||| | | ||||| | ||| | || | Sbjct 54995 ACACAGCTGTCTCGTCCGGCG-AGCTGTACTCGATAATCTCCGTGCAGAGGTTCGAGCTC 54937 Query 145703 TTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATG 145762 ||||| || ||||| || | ||| ||||| || | ||| || ||||||||| || | Sbjct 54936 TTGATCGTGCCCAGGTTCTTCTGGTTACTCTTGCGGTTCGCCGAGTCCTTGTACAGGACA 54877 Query 145763 TACGGTCCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCA-AG-TCCTGCGCAC 145820 | || ||| ||||| | |||| ||| | ||| | || || || | |||||| Sbjct 54876 AAAGGATTGCCCGTCTCAATTTGCGCCTCGAGGAT--AGCGTACCACAGCTTCTGCGCCT 54819 Query 145821 GCACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGG 145880 || ||| | ||||||||| ||||| ||| ||| || | |||||| | Sbjct 54818 TGACAGAGCGCTTGGCGCGGCCCTCGCGCTCGTACTTCTCGTACAGAGCATCAAACTCCT 54759 Query 145881 AACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGT 145940 || ||||| || | ||| || || |||| | ||| |||||||||||||| |||||| Sbjct 54758 CGCCATAGCAGTCAGCCAGACCTGGGCACTCGGCGGGGCACATCAGCGACCAGTCGCCGT 54699 Query 145941 TGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCG 146000 | | ||| || ||| |||| ||| || | ||||||||| | || |||||||| Sbjct 54698 TCTGTTCGACACGGCGCATGAACAGATCGGGAATCCACAGCGCCAGGAACAGGTCGCGCG 54639 Query 146001 CTTTGCA-ATCCTCAGCACCCATGTTTC--GCTTCAAATTAAGCACACTATAGATGTCCG 146057 | ||| ||||| ||||| ||| || || || || | | | | ||||| Sbjct 54638 C-GCGCACTTCCTC-CTTGCCATGGTTCTTGC-GCAGATCAATAAATTCAAAAACGTCCG 54582 Query 146058 CGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCA 146114 ||||||||| || | |||| || | ||| || || ||||| |||||||||| Sbjct 54581 AGTGCCACGGCTCCAGGTAGATCGCAAAGGCGCCCGGGCGCTTGTTGCCGCCCTGGTCCA 54522 Query 146115 CGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGT 146174 ||| || || ||||||| | ||||| | ||||||| | | ||| || || |||| Sbjct 54521 CGTAGCGCGCCGTGTTGTTGTACACGCGGAGCATGGGCACAATACCGTTGCTCACACCGT 54462 Query 146175 TCGTAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCA----ATGAACATTCACGCCGAGA 146230 |||| | || | ||| || |||||| | || | |||| || | | Sbjct 54461 TCGTGCCGGCGATGTACGAGCC-CG---TCGCACGAATGTTGTGGATGTTCAGACCAATA 54406 Query 146231 CCGCC-GCCGTACTTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGTCAAT 146289 ||||| ||||| |||| || || ||| |||||| ||||| || || || || Sbjct 54405 CCGCCGGCCGT-CTTGCTGATCATCGCACAGGTCTTGAGCGTGTCGTATATACCCTCGAT 54347 Query 146290 GCTATCG--CTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCC 146347 ||| |||| || | | || |||||||| |||| || | | ||||| || Sbjct 54346 CGAGTCGTCCTTC--ATACTCACAAGGAAGCACGACGACATTTGGGGGTTGGGCGTGCCG 54289 Query 146348 GCCGAGAACAACGTCGGGCTCGCGTGCGTAAA-CATTTTTCGGCTCATCATCCGATACGT 146406 || ||||| ||||| |||||| ||||| || |||| ||| ||||| Sbjct 54288 GCATTGAACAGGGTCGGCGACGCGTGTGTAAAGGCCTTCTCGG-ACATGTAGTTGTACGT 54230 Query 146407 TTCGATAGCGTCTTG-AATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGT 146465 ||||| ||| || | | ||| ||||| || ||||| | ||||||||||||||||||| Sbjct 54229 CTCGATCGCG-CTCGCCACGTCCTCGCCGTGGATGCCGACGGCGACGCGCATGAGCATGT 54171 Query 146466 GTTGGGGCCGCTCCGCCAC 146484 | ||||| |||||||| || Sbjct 54170 GCTGGGGGCGCTCCGCAAC 54152 >seq4 Length=1203039 Score = 129 bits (142), Expect = 6e-25 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 || ||||| | || | ||| |||||| ||||||||||| ||||||| ||||| | Sbjct 406156 CGAAGCACAAGGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCG 406097 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139 ||||| |||||||| || ||| |||| | |||||| |||||||||||||| || || ||| Sbjct 406096 TCCTCGAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTG 406037 Query 131140 TCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACG 131199 || ||| || ||||| | || | || || | ||||||| || | ||||| Sbjct 406036 TCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCCGACGACTCGACCTCAAGGGTAATC 405977 Query 131200 GTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || || || || ||||| || ||||| || |||||| Sbjct 405976 GTCTTGCCAGTCAGAGTCTTGACGAAGATTTGCATG 405941 >seq5 Length=703599 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| |||||||| | || | || |||||| || |||||||| |||||| Sbjct 231826 CCACCACGCAGGCGCAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 231885 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| ||| |||| | ||||| |||||||||||| Sbjct 231886 AGCGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGG 231945 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||| | | ||| | || |||| ||||| | Sbjct 231946 ATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACC 232005 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| ||| | || || ||||| || || || ||||| | |||||| Sbjct 232006 TCGAGGGTGATCGTCTTCCCGGTAAGGGTCTTGACGAACACTTGCATG 232053 Score = 89.7 bits (98), Expect = 5e-13 Identities = 114/156 (73%), Gaps = 1/156 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||||| |||||| || | || | || |||||| || || ||||| || ||| Sbjct 142049 CCACCGCGCAGACGCAGGACAAGGTGCAGCGTGCTCTCCTTCTGGATATTGTAGTCACTC 141990 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| || |||||||| || |||| | |||||||||||||| || Sbjct 141989 AGGGTACGTCCATCCTCCAGTTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGCGGA 141930 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGC 131163 || || || ||||| ||| ||| ||||| |||| Sbjct 141929 ATGCCCTCCTTGTCCTGGATCTTCGTCTTGA-CTGC 141895 >seq1 Length=1509180 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||||||||| || || | || |||||| ||||||||||| ||||| Sbjct 1005864 CCACCACGGAGACGCAGCACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTA 1005805 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| || | || | |||||| ||||||||||| Sbjct 1005804 AGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAGGA 1005745 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || || | ||||||| Sbjct 1005744 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACC 1005685 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | || || || || || || || || ||||| ||||| Sbjct 1005684 TCGAGGGTGATCGTCTTGCCAGTGAGGGTCTTAACAAAAATTTGCAT 1005638 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||||||||| || |||| || |||||| |||||||| || ||||| Sbjct 1006093 GCCACCACGGAGACGCAGCACCAAGTGTAGCGTGCTCTCCTTCTGAATGTTATAGTCGCT 1006034 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||||| ||||| ||||||||||| || | || | |||||| ||||||||||| Sbjct 1006033 AAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAGG 1005974 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| ||| || ||||| | || | || || | ||||||| Sbjct 1005973 AATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGAC 1005914 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | || || || || || || || || || || ||||| Sbjct 1005913 CTCGAGGGTGATCGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1005866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012752798720