Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149165.1_202017-01- 09] 8 sequences; 7,873,153 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq8 111 2e-19 >seq8 Length=440579 Score = 111 bits (122), Expect = 2e-19 Identities = 440/690 (64%), Gaps = 2/690 (0%) Strand=Plus/Minus Query 63018 CCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTT 63077 |||| || || || || | || ||||||| |||||| || |||| | | || || Sbjct 54743 CCAGACCTGGGCACTCGGCGGGGCACATCAGCGACCAGTCGCCGTTCTGTTCGACACGGC 54684 Query 63078 TCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGT 63137 ||| || ||||| |||||||| || || | || || || | | | |||||| | Sbjct 54683 GCATGAACAGATCGGGAATCCACAGCGCCAGGAACAGGTCGCGCGCGCGCACTTCCTCCT 54624 Query 63138 TTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGT 63197 | || ||||| ||||| | || | | || || || |||||||| |||| || Sbjct 54623 TGCCATGGTTCTTGCGCAGATCAATAAATTCAAAAACGTCCGAGTGCCACGGCTCCAGGT 54564 Query 63198 ATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTAT 63257 | || || | | || || || ||||| || ||||| || | ||| | || ||||| | Sbjct 54563 AGATCGCAAAGGCGCCCGGGCGCTTGTTGCCGCCCTGGTCCACGTAGCGCGCCGTGTTGT 54504 Query 63258 TATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGC 63317 | || || | | ||| || | |||||| ||| ||| || || || | ||| || Sbjct 54503 TGTACACGCGGAGCATGGGCACAATACCGTTGCTCACACCGTTCGTGCCGGCGATGTACG 54444 Query 63318 TTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 63377 || | |||||||| || || ||||| || || || ||| | || ||| | Sbjct 54443 AGCCCGTCGCACGAATGTTGTGGATGTTCAGACCAATACCGCCGGCCGTCTTGCTGATCA 54384 Query 63378 ATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTA 63437 || || || | ||| || || || ||||| || || ||| |||| | | | Sbjct 54383 TCGCACAGGTCTTGAGCGTGTCGTATATACCCTCGATCGAGTCGTCCTTCATACTCACAA 54324 Query 63438 GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 63497 | || || ||||||||| | || || ||||| || | ||| || || |||| Sbjct 54323 GGAAGCACGACGACATTTGGGGGTTGGGCGTGCCGGCATTGAACAGGGTCGGCGACGCGT 54264 Query 63498 GAGTAAACCATTTTTCAGAAA-GTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCAT 63556 | ||||| || || || | |||| ||||||||||| || || | | ||| Sbjct 54263 GTGTAAAGGCCTTCTCGGACATGTAG-TTGTACGTCTCGATCGCGCTCGCCACGTCCTCG 54205 Query 63557 TGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTG 63616 || || || || ||||| ||||| | ||||||||| || | || | | |||| Sbjct 54204 CCGTGGATGCCGACGGCGACGCGCATGAGCATGTGCTGGGGGCGCTCCGCAACCTTGCCA 54145 Query 63617 TTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAG 63676 || || || || |||||| || | || || || ||||| ||||||| ||| Sbjct 54144 TTGATCCGCAGCAGGTAGGAGCGCTCGAGCGTCTTGAAGCCAAAGAAGTTGTAGTGGAAG 54085 Query 63677 TCTCGTTCGTAAATAATAACCGAGTTGAGT 63706 || || |||||||| | |||||| |||| Sbjct 54084 TCGCGCTCGTAAATCACCGCCGAGTCGAGT 54055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631936636800