Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149165.1_202017-01-
09] 8 sequences; 7,873,153 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq1 125 6e-24
seq5 113 4e-20
seq4 93.3 4e-14
>seq1
Length=1509180
Score = 125 bits (138), Expect = 6e-24
Identities = 159/217 (73%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055
||||||||||| ||||| ||||| | || || || | ||||| |||| || ||||||
Sbjct 1005635 ACAATGCAAATTTTTGTTAAGACCCTCACTGGCAAGACGATCACCCTCGAGGTCGAGTCG 1005694
Query 25056 TCTGACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTG 25113
|| ||||| || || || || ||| || ||| ||||| || || ||||| || |
Sbjct 1005695 TCGGACACGATTGA--CAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGG 1005752
Query 25114 ACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATT 25173
|||||||||| | |||||||||||||| || | || |||| ||||| | |||| |
Sbjct 1005753 ACCAACAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTTAGCGACT 1005812
Query 25174 ACAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|||| ||||| || || |||||| || || |||||
Sbjct 1005813 ACAACATTCAGAAGGAGAGCACGCTGCACTTGGTGCT 1005849
Score = 120 bits (132), Expect = 3e-22
Identities = 156/214 (73%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| ||||| | || || || | ||||| |||| || ||||||||
Sbjct 1005866 ATGCAAATCTTTGTCAAGACCCTCACTGGCAAGACGATCACCCTCGAGGTCGAGTCGTCG 1005925
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||||| || || || || ||| || ||| ||||| || || ||||| || ||||
Sbjct 1005926 GACACGATTGA--CAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACC 1005983
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
||||||| | |||||||||||||| || | || |||| ||||| | |||| || |
Sbjct 1005984 AACAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTTAGCGACTATA 1006043
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
| ||||| || || ||||||||| || |||||
Sbjct 1006044 ACATTCAGAAGGAGAGCACGCTACACTTGGTGCT 1006077
>seq5
Length=703599
Score = 113 bits (124), Expect = 4e-20
Identities = 154/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055
|| |||||| | || || ||||| | ||||| || | ||||| |||| ||||||||
Sbjct 232055 ACCATGCAAGTGTTCGTCAAGACCCTTACCGGGAAGACGATCACCCTCGAGGTGGAGTCT 231996
Query 25056 TCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
|| ||||| |||||| ||||| || ||| ||||| || || || || || |||
Sbjct 231995 TCCGACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGAC 231936
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
|||||||| | || || |||||||| || | || |||| |||||| || |||| |||
Sbjct 231935 CAACAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACGCTGAGCGACTAC 231876
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| || || || || |||||| || | |||||
Sbjct 231875 AACATCCAGAAGGAGAGCACGCTCCACCTTGTGCT 231841
>seq4
Length=1203039
Score = 93.3 bits (102), Expect = 4e-14
Identities = 150/214 (70%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || |||||| |||| || || | || || | || || ||||||||
Sbjct 405942 ATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATTACCCTTGAGGTCGAGTCGTCG 406001
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||||| ||||| || || ||| || ||| ||||| || || || || || ||||
Sbjct 406002 GACACGATCGA--CAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACC 406059
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
||||||| | || || || || || || | || || | |||||| || |||| ||||
Sbjct 406060 AACAGCGTCTGATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTGAGCGACTACA 406119
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
| ||||| || || ||| || || | |||||
Sbjct 406120 ACATTCAGAAGGAGAGCACCCTGCACCTTGTGCT 406153
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327957750520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |