Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149165.1_202017-01-
09] 8 sequences; 7,873,153 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq1 120 3e-22
seq5 87.8 2e-12
seq4 84.2 2e-11
>seq1
Length=1509180
Score = 120 bits (132), Expect = 3e-22
Identities = 141/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||||||||| || | || || || ||| |||| || || || || | |
Sbjct 1005638 ATGCAAATTTTTGTTAAGACCCTCACTGGCAAGACGATCACCCTCGAGGTCGAGTCGTCG 1005697
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || |||| || || || ||||||||||| ||||| || || |||
Sbjct 1005698 GACACGATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 1005757
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || ||||||||||| ||| | |||||| |||||| | ||| ||||||
Sbjct 1005758 CAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTTAGCGACTACAAC 1005817
Query 22399 ATTCAAAAAGA 22409
||||| || ||
Sbjct 1005818 ATTCAGAAGGA 1005828
Score = 109 bits (120), Expect = 5e-19
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| ||||| || || | || || || ||| |||| || || || || | |
Sbjct 1005866 ATGCAAATCTTTGTCAAGACCCTCACTGGCAAGACGATCACCCTCGAGGTCGAGTCGTCG 1005925
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || |||| || || || ||||||||||| ||||| || || |||
Sbjct 1005926 GACACGATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 1005985
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || ||||||||||| ||| | |||||| |||||| | ||| || |||
Sbjct 1005986 CAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTTAGCGACTATAAC 1006045
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433
||||| || || ||| |||| || || ||||
Sbjct 1006046 ATTCAGAAGGAGAGCACGCTACACTTGGTGCTGCG 1006080
>seq5
Length=703599
Score = 87.8 bits (96), Expect = 2e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||| | || || || || | ||||| || ||| |||| || || ||||| | ||
Sbjct 232052 ATGCAAGTGTTCGTCAAGACCCTTACCGGGAAGACGATCACCCTCGAGGTGGAGTCTTCC 231993
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || || | || || || || |||||||||||||| || || || |||
Sbjct 231992 GACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAA 231933
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || || || || |||||||| ||| | |||||| ||||| | ||| ||||||
Sbjct 231932 CAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACGCTGAGCGACTACAAC 231873
Query 22399 ATTCAAAAAGA 22409
|| || || ||
Sbjct 231872 ATCCAGAAGGA 231862
>seq4
Length=1203039
Score = 84.2 bits (92), Expect = 2e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || || ||| | || || || ||| | || ||||| || || | |
Sbjct 405942 ATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATTACCCTTGAGGTCGAGTCGTCG 406001
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || |||| || || || ||||||||||| || || || || |||
Sbjct 406002 GACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAA 406061
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || || || || || ||| | ||||| ||||| | ||| ||||||
Sbjct 406062 CAGCGTCTGATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTGAGCGACTACAAC 406121
Query 22399 ATTCAAAAAGA 22409
||||| || ||
Sbjct 406122 ATTCAGAAGGA 406132
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727959076520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |