Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149165.1_202017-01- 09] 8 sequences; 7,873,153 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq1 120 3e-22 seq5 87.8 2e-12 seq4 84.2 2e-11 >seq1 Length=1509180 Score = 120 bits (132), Expect = 3e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||||||||| || | || || || ||| |||| || || || || | | Sbjct 1005638 ATGCAAATTTTTGTTAAGACCCTCACTGGCAAGACGATCACCCTCGAGGTCGAGTCGTCG 1005697 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || |||| || || || ||||||||||| ||||| || || ||| Sbjct 1005698 GACACGATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 1005757 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||||||||| ||| | |||||| |||||| | ||| |||||| Sbjct 1005758 CAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTTAGCGACTACAAC 1005817 Query 22399 ATTCAAAAAGA 22409 ||||| || || Sbjct 1005818 ATTCAGAAGGA 1005828 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || || | || || || ||| |||| || || || || | | Sbjct 1005866 ATGCAAATCTTTGTCAAGACCCTCACTGGCAAGACGATCACCCTCGAGGTCGAGTCGTCG 1005925 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || |||| || || || ||||||||||| ||||| || || ||| Sbjct 1005926 GACACGATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 1005985 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||||||||| ||| | |||||| |||||| | ||| || ||| Sbjct 1005986 CAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTTAGCGACTATAAC 1006045 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433 ||||| || || ||| |||| || || |||| Sbjct 1006046 ATTCAGAAGGAGAGCACGCTACACTTGGTGCTGCG 1006080 >seq5 Length=703599 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||| | || || || || | ||||| || ||| |||| || || ||||| | || Sbjct 232052 ATGCAAGTGTTCGTCAAGACCCTTACCGGGAAGACGATCACCCTCGAGGTGGAGTCTTCC 231993 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | || || || || |||||||||||||| || || || ||| Sbjct 231992 GACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAA 231933 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || |||||||| ||| | |||||| ||||| | ||| |||||| Sbjct 231932 CAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACGCTGAGCGACTACAAC 231873 Query 22399 ATTCAAAAAGA 22409 || || || || Sbjct 231872 ATCCAGAAGGA 231862 >seq4 Length=1203039 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || ||| | || || || ||| | || ||||| || || | | Sbjct 405942 ATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATTACCCTTGAGGTCGAGTCGTCG 406001 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || |||| || || || ||||||||||| || || || || ||| Sbjct 406002 GACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAA 406061 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || || ||| | ||||| ||||| | ||| |||||| Sbjct 406062 CAGCGTCTGATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTGAGCGACTACAAC 406121 Query 22399 ATTCAAAAAGA 22409 ||||| || || Sbjct 406122 ATTCAGAAGGA 406132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727959076520