Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149165.1_202017-01-
09] 8 sequences; 7,873,153 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq8 167 5e-36
seq3 116 8e-21
>seq8
Length=440579
Score = 167 bits (184), Expect = 5e-36
Identities = 398/592 (67%), Gaps = 11/592 (2%)
Strand=Plus/Plus
Query 251554 ACACGGCGTTCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAG 251613
|| ||||| ||||| || || |||||||||| || ||||| |||||| |||||||||
Sbjct 41739 ACGCGGCGCTCGAAAAAGTTCGACTTGCCCTGGAGCGAGATGTTCTCCATAAAGTCGAAG 41798
Query 251614 GGGTTTGTGGCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACA 251673
||||| || | ||||| ||||| || | ||| || |||| | |||||| ||||||
Sbjct 41799 GGGTTCGTCGAGTTGTAGTGCTTCGGGTTGCCGAGGTTGACGAGCAGGCGGTCCGCCACA 41858
Query 251674 AACTCCAGATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACA-AGGAATTGC 251732
||||| | ||||| | ||| || | ||||||||| |||| ||| | ||| | ||
Sbjct 41859 AACTCAATGTACTGGCACATGAGGCGCGCGTTCATGCCGATCA-GCGAAACAGGCAAGGC 41917
Query 251733 CTCACAGATGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGC 251792
||| | || |||| || |||| || ||||| | || |||| |||||
Sbjct 41918 GTCAGTCAAAAAGTCCTGCTCAATGGCCACAGCCTCGGTGATGATGCGGTTCA-CTGTGT 41976
Query 251793 CAGAGACAGCTTG-TTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGAC 251851
||| | || | |||| ||| | | ||||||| | |||| | |||||| |
Sbjct 41977 CAGGGTGCGCACGCTTCTTCAGGTGGCTGAACAGGAGACAGGCAAAGTCGGTGTGCAGGC 42036
Query 251852 CCTCGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCC 251911
|||| ||||| ||||| |||||| || | ||| |||||||| | || || |||
Sbjct 42037 CCTCATCGCGCGAGATGAGCTCGTTCGAGAACGACAGACCAGGCATGAGGCCGCGCTTCT 42096
Query 251912 TGAGCCAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATG 251971
||||||||||||| | | ||| || || ||||| | | |||||||| | | |
Sbjct 42097 TGAGCCAGAAGATGGAGGCAAACGAGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGG 42156
Query 251972 CAACAAGGCGCTCAGCAAACGACTTG-TCCTG--CGACAAGAACTTCTGTGCCCATGCTG 252028
| ||||||||||| | ||||| | |||| ||| | | | | ||||| | |
Sbjct 42157 CCACAAGGCGCTCCGAGAACGAGGCGCGCCTGTCCGAGATCCAGCGCAGGGCCCACTCGG 42216
Query 252029 CCTTCTTTCCAACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTCCGCTCGGCAT 252088
|||||| || ||||||| || ||||| || | |||||| | | |||| ||
Sbjct 42217 CCTTCTGCTTGACGACGGGGATCGTCTCGATAGCGTTGAAGAGAAACTCACGCT--GCTC 42274
Query 252089 CG--TCCTCGATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATG 252138
|| || |||| || || | ||||| |||||| ||||||| ||||||
Sbjct 42275 CGGCTCGCGGATGTACGTGTCGATGAGGAGCGAGTACGTCTCCGAGTGGATG 42326
>seq3
Length=1354264
Score = 116 bits (128), Expect = 8e-21
Identities = 397/613 (65%), Gaps = 18/613 (3%)
Strand=Plus/Minus
Query 218402 GCGAGCTCATCGACCGATCTTTCAACAAGTCTCGTCCTGATGAGCGCAAGACCTGGCTGC 218461
|||| ||| |||||| | ||||||||| | || || |||||| |||||||
Sbjct 276530 GCGATCTCGTCGACCTGGCCTTCAACAAGAAGAAGGCGGACGACCGCAAGGAGTGGCTGC 276471
Query 218462 TCGACTTCCAGCCCGGAAACCAGTTGGACCAGTCGAAGAC-CAACATCCCCGTCCCTGAC 218520
| | ||| ||| || | | | ||||||| || | | | | |||||| || | |||
Sbjct 276470 GCCAGTTCGTGCCGGGCACCTACCTGGACCAC-CGCATCCGCCAGATCCCCATCTCGGAC 276412
Query 218521 TTCATCGACAAGGAGCTCATTCTTTTCTC----GCGGTATGATGTGGAGCGTTCTATTCC 218576
|| ||| |||||||||| || || ||||| |||| | || | || || || ||
Sbjct 276411 TTTATCAACAAGGAGCTGATCCTCTTCTCCATGGCGG-ACAATATC---CGCTCGATCCC 276356
Query 218577 CAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAAGCG 218636
|||||||| || ||||||||||| ||||| ||| |||| || | ||||||||
Sbjct 276355 GAGCGTGGTCGACGGCCTCAAGCCGGGCCAGCGCAAGGTCCTGTTCGGTTGCTTCAAGCG 276296
Query 218637 GAACCTGGTTCAA----GAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTT 218692
|||| |||| ||||| ||||| ||| | ||||| || || ||
Sbjct 276295 TAACC----TCAAGACGGAAATCAAGGTGCAGCAGCTGCAGGGTTACGTGTCGGAGCACA 276240
Query 218693 CTGGCTACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACT 218752
| | || || ||||| || ||||||||| | ||||| ||| | || |||||||
Sbjct 276239 CGGCGTATCACCACGGCGACCAGAGTCTGGTAATGACGATTGTGGGCCTTGCGCAGGACT 276180
Query 218753 ATGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGTCTAT 218812
| ||||| |||||| |||| |||| | |||||||| || || || | ||
Sbjct 276179 TTTGCGGCAGCAACAACGTGAATATGCTCATGCCCAACGGCCAATTCGGCACGCGCAGCA 276120
Query 218813 TGGGTGGAAAGGATAGTGCTTCTGCCAGGTATATCTTTACAAAGTTGTCGCCCGTGACGC 218872
|||| || ||||| || ||| | || || || || || ||| | | ||||
Sbjct 276119 TGGGCGGCAAGGACGCGGCGAGCGCCCGTTACATTTTCACGGCCGTGCCGCGCATCACGC 276060
Query 218873 GCCAGGTGTTCAATCAGGCCGATGATGTGCTCCTTAAGTATCTTGAGGACGATGGTTCTT 218932
||||| | ||| | | | || || | ||||| || || || || || || ||
Sbjct 276059 GCCAGCTCTTCCACCCGAAGGACGACGCACTCCTCAACTACCTCGACGAGGACGGGCAGA 276000
Query 218933 CGATTGAGCCCGAGTGGTATGTGCCTGCTATTCCGTTTTTGCTCGTAAATGGTGCCAATG 218992
|| |||||||||||||| || || | | ||| |||| | || || ||| | |
Sbjct 275999 GCATCGAGCCCGAGTGGTACGTCCCGGTCGTGCCGCAGGTGCTGCTCAACGGCGCCGACG 275940
Query 218993 GTATCGGGACAGG 219005
||||||| || ||
Sbjct 275939 GTATCGGCACGGG 275927
Score = 105 bits (116), Expect = 1e-17
Identities = 157/220 (71%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404
|| ||||| |||||| ||||| | |||||||| || || |||| ||||||||||| |||
Sbjct 396779 GGCGAGGACCTGTGTAACTGTCAGTTCTCGCTGGCCTACGGTGCCAAGATTCTGCTGAAC 396720
Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464
| || ||| | ||||||||||| |||| || |||||| |||| || || |
Sbjct 396719 ACCGCCACCCTGCGCCTCAAGCGTGGCCACCGCTACGGTCTCTGTGGTCGTAACGGTTCC 396660
Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524
|||||| || || ||||||||||| ||||| ||| | | ||| |||| |||
Sbjct 396659 GGTAAGTCGACCCTGATGCGCGCCATCCAGAACGGCCAGGTCG-AGGGCTTCCCGTCGCC 396601
Query 279525 T-CTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGAC 279563
| ||||| | || ||| || ||||||||| |||||
Sbjct 396600 TGAGGAGGTCCGCACCTGGTACGTCGAGCACGACCTCGAC 396561
Score = 96.9 bits (106), Expect = 7e-15
Identities = 138/194 (71%), Gaps = 3/194 (2%)
Strand=Plus/Minus
Query 279705 CTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCCGAT 279764
|||||||||||||||||||||||||| ||||| | || ||| | || | |||||
Sbjct 396425 CTGTCGGGTGGTTGGAAGATGAAGCTCGCCCTGGCCCGTGCCGTGCTGTTCAAGGCCGAC 396366
Query 279765 GTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTAGTG 279824
| || ||||| |||||||| ||||||||| ||||| | |||||| |||||| | |
Sbjct 396365 ATTCTGCTGCTCGATGAGCCGACCAACCACTTGGACGTGATCAACGTGGCCTGGATCACG 396306
Query 279825 TCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCTGGCTTC 279884
|||||| || | | ||| | | || ||||||| || |||||||| |||
Sbjct 396305 AACTACCTGTGCACT---ACGAACGCCACCTCGATCATTGTGTCGCACGACTCCAAGTTC 396249
Query 279885 CTAGATGCCGTGTG 279898
|| | | ||||||
Sbjct 396248 CTGAACGACGTGTG 396235
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027836694646728
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |