Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149165.1_202017-01- 09] 8 sequences; 7,873,153 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq8 273 2e-68 seq4 134 1e-26 seq1 120 3e-22 seq5 107 2e-18 >seq8 Length=440579 Score = 273 bits (302), Expect = 2e-68 Identities = 960/1469 (65%), Gaps = 65/1469 (4%) Strand=Plus/Minus Query 153025 ACTGGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGA 153084 || |||||||||| || ||||| || || | ||| || | || || | ||||| ||| Sbjct 55592 ACGGGTTGACCACCTGGAACTCACCGGCAAGCACACGGCGCATGTAAATGTTGCTCGTGT 55533 Query 153085 AAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACG 153144 | || |||||| | ||||| ||| || || ||| ||||| || ||||||||| || Sbjct 55532 ACGGCTCAAAGCACTCGTTGAAGCCAAGGATCTGACTCGTGGAGGCCGTCGGCATGGGCG 55473 Query 153145 CCACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAAT 153204 ||| || || || || |||| |||||| ||| | |||| | || ||| | Sbjct 55472 CCATCAGCAGCGAGTTGCGCAGACCGTGCTGGGCAATCTTTGCCTTGAGCGAGGCCCAGT 55413 Query 153205 CCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGG 153264 ||||||| ||||||| || |||||||||||||||||| | | || | ||| | Sbjct 55412 CCCACAGGTCCGACGGCGTGCGGTTCCACATGTCGTACTGCAGGAGGCCCTGCGAGGCAG 55353 Query 153265 GACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGG--GCCAGTTCGCAGCTAGCCTC 153322 | ||||| | |||| ||| |||| | | || ||||| |||||||| ||| Sbjct 55352 GGCTGCCCTCGTACGTCTCGTATGTGCCAT--ATTCGGCCGCCAGCTCGCAGCTGCGCTC 55295 Query 153323 GAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCT 153382 | || ||| ||| ||||| || ||| || ||| || | | ||| || | ||| Sbjct 55294 CAAGGCCGCATGGTAAATGGTCTCAAAGATCTGCACATTCAGCAGGCGCGCCTCCTGGCT 55235 Query 153383 CTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGAT 153442 ||| |||| || || | || || || ||||| || ||||||| ||||| ||||| Sbjct 55234 GTCGAACGGATAGCCCATGATCATGAACGCATCGGCAAGGCCCTGGACACCGATACCGAT 55175 Query 153443 GGGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCTATGGGATAGTGATTGCGATCGAT 153502 ||| || ||| | ||| ||| | || ||| | | || |||| ||| |||||| Sbjct 55174 GGGGCGGTGCCGCATGTTCGAGCGACGTGCACTCTCCACAGGGTAGTAGTTGATATCGAT 55115 Query 153503 AATTTTGTTGAGGTT-GCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCAT 153561 || ||| ||||| ||| ||||||||| | | | | || | ||| | | Sbjct 55114 GATGCGGTTCAGGTTCTTGCA-CACCACTTTCGACACGTCGTGCAGGCGTTGGAAGTTGT 55056 Query 153562 AGGTCATTTCGTCG-ACGCGTACGCATCGATTCACG--------GCAATAGACGCCAGAT 153612 | ||| |||| | || || | | || || ||| ||||| |||||||| | Sbjct 55055 ATGTC--TTCGAGGCACCGGTGC-CCTCAATAAACGTCGGCAGCGCAATCGACGCCAGGT 54999 Query 153613 TACAGACGGCCGTCTC-TTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTG 153671 | || || || ||||| | ||||| |||||||| | ||||| | ||||||||| | Sbjct 54998 TGCACACAGCTGTCTCGTCCGGCG-AGCTGTACTCGATAATCTCCGTGCAGAGGTTCGAG 54940 Query 153672 CATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGC 153731 | || || ||||| || | ||| || || ||||| || || ||| ||| | || Sbjct 54939 CTCTTGATCGTGCCCAGGTTCTTCTGGTTACTCTTGCGGTTCGCCGAGTCCTTGTACAGG 54880 Query 153732 ATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGATAAACCTA-TGCAGGTCCTGCGC 153790 | | || ||| ||||| | ||||| |||| ||| | | || ||| | |||||| Sbjct 54879 ACAAAAGGATTGCCCGTCTCAATTTGCGCCTCGAGGAT-AGCGTACCACAGCTTCTGCGC 54821 Query 153791 --TCGCA-CCCGC-TGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAA 153846 | || ||| || | ||||||||||| |||||| ||||||||| |||| Sbjct 54820 CTTGACAGAGCGCTTGGC----GCGGCCCTCGCGCTCGTACTTCTCGTACAGAGCATCAA 54765 Query 153847 ACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACA 153906 |||| ||||| |||||||| || || || || |||| || |||||||||||||| Sbjct 54764 ACTCCTCGCCATAGCAGTCAGCCAGACCTGGGCACTCGGCGGGGCACATCAGCGACCA-- 54707 Query 153907 TATCGTCGGCGTT------GACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACA 153960 |||| |||| ||| || |||||||||||||| || | ||| ||||| | Sbjct 54706 ----GTCGCCGTTCTGTTCGACACGGCGCATGAACAGATCGGGAATCCACAGCGCCAGGA 54651 Query 153961 TGAGGTCGCGCGCCTTGCA-ATCCTCCGCGCCCATG----TTGCGTTTCAGATTGAGCAC 154015 |||||||||| | ||| |||||| | ||||| ||||| ||||| | | Sbjct 54650 ACAGGTCGCGCG-CGCGCACTTCCTCCTTG-CCATGGTTCTTGCG---CAGATCAATAAA 54596 Query 154016 GCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGC---TT 154072 | | | ||| | |||||| || || | ||||| || | ||| || ||| || Sbjct 54595 TTCAAAAACGTCCGAGTGCCACGGCTCCAGGTAGATCGCAAAGGCGCCCGGGCGCTTGTT 54536 Query 154073 TCCGCCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCC 154132 |||||||| || |||| |||| || | |||||| | ||||| | |||||| | | || Sbjct 54535 GCCGCCCTGGTCCACGTAGCGCGCCGTGTTGTTGTACACGCGGAGCATGGGCACAATACC 54476 Query 154133 GCTTGC-GGTGCCGTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGT 154191 | |||| ||||| || ||| | ||| || || | | || | || Sbjct 54475 G-TTGCTCACACCGTTCGTGCCGGCGATGTACGAGCCCGTCGCACGAATGTTGTGGATGT 54417 Query 154192 TAACGCCAATGCCGCC-GCCGTACTT--TGAT-ATGGCAGCGCAGTCGCCCAGCGTCCTG 154247 | | ||||| ||||| ||||| ||| |||| || ||| ||| ||||| | Sbjct 54416 TCAGACCAATACCGCCGGCCGT-CTTGCTGATCATCGCA---CAGGTCTTGAGCGTGTCG 54361 Query 154248 TAGATGCCGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGA 154307 || || || ||||| ||||| | | | | ||| ||||| ||||||| || Sbjct 54360 TATATACCCTCGATCGAGTCGTCCTTCATACTCACAAGGAAGCACGACGACATTTGGGGG 54301 Query 154308 ATGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATC 154367 || |||| || || || ||||| || |||||| ||||| || | | ||| Sbjct 54300 TTGGGCGTGCCGGCATTGAACAGGGTCGGCGACGCGTGTGTAAAGGCCTTCTCGGACATG 54241 Query 154368 ATGCGGTACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGC 154427 | |||||| ||||| ||| | | || |||||||| ||||||| ||||||||| Sbjct 54240 TAGTTGTACGTCTCGATCGCGCTCGCCACGTCCTCGCCGTGGATGCCGACGGCGACGCGC 54181 Query 154428 ATGAGCATGTGCTGCGGACGTTCGGCGAC 154456 |||||||||||||| || || || || || Sbjct 54180 ATGAGCATGTGCTGGGGGCGCTCCGCAAC 54152 Score = 197 bits (218), Expect = 1e-45 Identities = 323/461 (70%), Gaps = 11/461 (2%) Strand=Plus/Minus Query 52382 CGCCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGG 52441 |||| || | | |||||| | |||||||| ||| ||||||||| | ||||| || || Sbjct 42182 CGCCTCGTTCTCGGAGCGCCTTGTGGCCTTTGCCGCCGTCGAGGGCATCTTTTTCTCGGG 42123 Query 52442 CAGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAG 52501 | |||||| ||||||| | | || | | ||| | ||||| || ||| ||||| Sbjct 42122 CTCGTTTGCCTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCTGGTCTGTCGTTCTC 42063 Query 52502 CAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAA 52561 |||||| | || |||||||| || || |||||||| |||||||| || ||| | || Sbjct 42062 GAACGAGCTCATCTCGCGCGATGAGGGCCTGCACACCGACTTTGCCTGTCTCCTGTTCAG 42003 Query 52562 GACGCGCGTGACCGAAAAATTGG-ATTCGGACAC---GATCCTGAGCATGTTCAAGGAGG 52617 | | ||| ||| | | | | ||||| || || |||| ||| |||| Sbjct 42002 C---CACCTGAA-GAAGCGTGCGCACCCTGACACAGTGAACC---GCATCATCACCGAGG 41950 Query 52618 CGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGA 52677 | ||||| || || |||| ||||| || | ||| |||| || |||| | ||||||| Sbjct 41949 CTGTGGCCATTGAGCAGGACTTTTTGACTGACGCCTTGCCTGTTTCGCTGATCGGCATGA 41890 Query 52678 ACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCG 52737 |||||| ||||||| ||||||| |||||||||||||| || ||| | || | |||| Sbjct 41889 ACGCGCGCCTCATGTGCCAGTACATTGAGTTTGTGGCGGACCGCCTGCTCGTCAACCTCG 41830 Query 52738 GGCAGCCAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTG 52797 | | || ||| ||| |||| | || || || || |||||| | ||||| ||||| Sbjct 41829 GCAACCCGAAGCACTACAACTCGACGAACCCCTTCGACTTTATGGAGAACATCTCGCTCC 41770 Query 52798 AGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTAT 52838 |||||||| | |||||||||||| || || | ||| ||| Sbjct 41769 AGGGCAAGTCGAACTTTTTCGAGCGCCGCGTTGCCGACTAT 41729 >seq4 Length=1203039 Score = 134 bits (148), Expect = 1e-26 Identities = 149/196 (76%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| ||||||||||||||||||| || || ||||||||| || ||||| | | Sbjct 406133 CTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAA 406074 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATT 138541 ||| |||||||||||||||||||| || || || ||||| ||| || || | ||| Sbjct 406073 GATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 406014 Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601 | || | ||||| | |||||| ||||| | || | ||| || ||||||||||| || | Sbjct 406013 G-TCGATCGTGTCCGACGACTCGACCTCAAGGGTAATCGTCTTGCCAGTCAGAGTCTTGA 405955 Query 138602 CAAAAATCTGCATGGC 138617 | || || |||||||| Sbjct 405954 CGAAGATTTGCATGGC 405939 >seq1 Length=1509180 Score = 120 bits (132), Expect = 3e-22 Identities = 144/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| ||||||||||||||||| | || || ||||| || || || |||| | | Sbjct 1005829 CTCCTTCTGAATGTTGTAGTCGCTAAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAA 1005770 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATT 138541 || |||||||||||||||||||| || || || ||||| ||| || || | ||| Sbjct 1005769 AATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 1005710 Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601 | || | ||||| | |||||| ||||||| || | ||| || ||||| || || || | Sbjct 1005709 G-TCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTTGCCAGTGAGGGTCTTAA 1005651 Query 138602 CAAAAATCTGCAT 138614 ||||||| ||||| Sbjct 1005650 CAAAAATTTGCAT 1005638 Score = 113 bits (124), Expect = 4e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || || | ||||| || || |||| | |||||| |||||||| |||||||| Sbjct 1006093 GCCACCACGGAGACGCAGCACCAAGTGTAGCGTGCTCTCCTTCTGAATGTTATAGTCGCT 1006034 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || || ||||| || || || |||| | | || |||||||||||||||||||| Sbjct 1006033 AAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAGG 1005974 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCA 138565 || || || ||||| ||| || || | |||| || | ||||| | |||||| | Sbjct 1005973 AATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTG-TCAATCGTGTCCGACGACTCGA 1005915 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||| || | ||| || ||||| || || || ||||| || ||||| Sbjct 1005914 CCTCGAGGGTGATCGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1005866 >seq5 Length=703599 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || |||||||||||||||| || || ||||| || || || |||| | Sbjct 231861 CTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGACCATCCTCCAGCTGCTTGCCGGCGAA 231920 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTG 138542 ||| || ||||||||||||||||| ||||| || ||||| ||| || || | | Sbjct 231921 GATCAGGCGCTGTTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTCACATT 231980 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | ||||||| ||||||||||||| || | ||| || || || || || || || Sbjct 231981 CTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTTCCCGGTAAGGGTCTTGAC 232040 Query 138603 AAAAATCTGCATGG 138616 || | ||||||| Sbjct 232041 GAACACTTGCATGG 232054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262350373760