Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149165.1_202017-01- 09] 8 sequences; 7,873,153 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq8 134 1e-26 seq1 95.1 1e-14 >seq8 Length=440579 Score = 134 bits (148), Expect = 1e-26 Identities = 707/1117 (63%), Gaps = 55/1117 (5%) Strand=Plus/Plus Query 123235 CCATGCTGCGAGTTTACAATAACGCCGTGCGGCACGTCGACCAGGGCGGCAAA---CGCA 123291 ||||||| || || ||||| ||| | | ||| |||| |||||||||||||| ||| Sbjct 54486 CCATGCTCCGCGTGTACAACAACACGGCGCGCTACGTGGACCAGGGCGGCAACAAGCGCC 54545 Query 123292 AAGGCGCGATGGCGATCTATCTAGAACCGTGGCACGTTGATGTGTACGATTTTTTAAATT 123351 ||||| | |||||||| || || ||||||||| || || | || ||| | || Sbjct 54546 CGGGCGCCTTTGCGATCTACCTGGAGCCGTGGCACTCGGACGTTTTTGAATTTATTGATC 54605 Query 123352 TAAAACGCAA----CATGGGGGCGGAAGAAAAGAAAGCCCGCGATTTGTTGTACGCTTTA 123407 | ||||| ||||| ||| ||| | || ||||| |||| || | Sbjct 54606 TG---CGCAAGAACCATGGCAA-GGAGGAAGTGCGCGCGCGCGACCTGTTCCTGGCGCTG 54661 Query 123408 TGGGTACCCGATTTGTTTATGCGACGCGTAAAAGACGACGGCGTGTGGTCGCTCATGTGT 123467 ||| | |||||| |||| ||||| || || || | |||||| |||||||| ||||| Sbjct 54662 TGGATTCCCGATCTGTTCATGCGCCGTGTCGAACAGAACGGCGACTGGTCGCTGATGTGC 54721 Query 123468 CCCGATCGGTGTCCCGGCTTGAGCGACGTTTACGGCAATCAGTTTGACGAGTTGTACGCG 123527 |||| ||| || || || ||| || ||| | ||||||| | |||||| | Sbjct 54722 CCCGCCGAGTGCCCAGGTCTGGCTGACTGCTATGGCGAGGAGTTTGATGCTCTGTACGAG 54781 Query 123528 CAATACGAGCGCGAAGGCA-----AACAGGTTAGTCAGGTTCCGGCACGTGATTTGTTCA 123582 | ||||||||||| ||| || | | |||| | | | | || || | Sbjct 54782 AAGTACGAGCGCGAGGGCCGCGCCAAGCGCTCTGTCAAGGCGCAGAAGCTG---TGGT-- 54836 Query 123583 AATTTATTATCGAAACACAAGTCGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCT 123642 | ||| |||| | ||| | || || || | || | | || ||||| ||| | Sbjct 54837 ACGCTATCCTCGAGGCGCAAATTGAGACGGGCAATCCTTTTGTCCTGTACAAGGACTCGG 54896 Query 123643 GCAACAGGAAAACCAATCAGAGCAACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCG 123702 ||| | || | || |||| ||| |||| || || || | || || ||| | | Sbjct 54897 CGAACCGCAAGAGTAACCAGAAGAACCTGGGCACGATCAAGAGCTCGAACCTCTGCACGG 54956 Query 123703 AAATTATCGAATACAGCGATGCCGATCAAGTG-GCCGTGTGTAATTTGGCTTCGATT--- 123758 | |||||||| |||||| |||| | || || ||||| || |||| |||||| Sbjct 54957 AGATTATCGAGTACAGCTC-GCCGGACGAGACAGCTGTGTGCAACCTGGCGTCGATTGCG 55015 Query 123759 --------------TGCGTGAATCGTTGCGTCGAAAACGGCGCTTTTAATTTCCAAACGC 123804 || | | | || ||| ||||| || | || |||||| ||| Sbjct 55016 CTGCCGACGTTTATTGAGGGCACCGGTGCCTCGAAGACA-----TACAACTTCCAA-CGC 55069 Query 123805 TCAAACG-CATAACAAAAACTGTAGTAAAGAATTTGAACAAAATTATCGATGTTAATTTT 123863 ||| | | | ||| || ||||| ||||| || |||||| | || | Sbjct 55070 CTGCACGACGTGTCGAAAGTGGTGTGCAAGAACCTGAACCGCATCATCGATATCAACTAC 55129 Query 123864 TATCCTTTGGAGGAAGCGCGTTTGTCTAATTTGAAACACAGACCGGTCGGAGTGGGCATT 123923 || ||| ||||| || ||| || || || ||| | || |||| | || | Sbjct 55130 TACCCTGTGGAGAGTGCACGTCGCTCGAACATGCGGCACCGCCCCATCGGTATCGGTGTC 55189 Query 123924 CAAGGGTTGGCCGACGCGTTTGTAATGCTGCGCATGCCGTACGAAAGCGACGAAGCAAAG 123983 || || | ||||| ||||| | || || || |||| ||| ||| | || || Sbjct 55190 CAGGGCCTTGCCGATGCGTTCATGATCATGGGCTATCCGTTCGACAGCCAGGAGGCGCGC 55249 Query 123984 TTGCTTAATACGCAAATAGCCGAAACAATTTATTACGGCGCTTTGGAGGCGAGCTGCGAA 124043 |||| ||| ||| || || || ||||| | | || |||||| |||||||| Sbjct 55250 CTGCTGAATGTGCAGATCTTTGAGACCATTTACCATGCGGCCTTGGAGCGCAGCTGCGAG 55309 Query 124044 CTTGCGAA--AATTCACGGCGCGTACGAAAGTTACGCGGGCAGCCCGGCGAGCCGAGGTA 124101 || ||| ||| | ||| | ||||| | |||| ||||||||| || | || Sbjct 55310 CTGGCGGCCGAAT--ATGGCACATACGAGACGTACGAGGGCAGCCCTGCCTCGCAGGGCC 55367 Query 124102 TTTTGCAGTACGACATGTGGAATGCTACACCGACAAATTTGTGGGACTGGAGCGTT--TT 124159 | ||||||||||||||||||| || ||| | | ||||||||||| || | | Sbjct 55368 TCCTGCAGTACGACATGTGGAACCGCACGCCGTCGGACCTGTGGGACTGG-GCCTCGCTC 55426 Query 124160 AAAACAACGCATATCGACGCACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATGCCGAC 124219 || ||| | | | | ||||||| |||| ||||||||| || ||||| ||||||||| Sbjct 55427 AAGGCAAAGATTGCCCA-GCACGGTCTGCGCAACTCGCTGCTGATGGCGCCCATGCCGAC 55485 Query 124220 GGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCTTCGAGCCGTTCACTAACAATTT 124279 ||| |||| ||| || | || |||||| | ||| ||||||| ||| | ||| | Sbjct 55486 GGCCTCCACGAGTCAGATCCTTGGCTTCAACGAGTGCTTTGAGCCGTACACGAGCAACAT 55545 Query 124280 GTACGTGCGACGAGTGTTAGCCGGCGATTTTCAAGTG 124316 ||| |||| || ||| | ||||| || || || ||| Sbjct 55546 TTACATGCGCCGTGTGCTTGCCGGTGAGTTCCAGGTG 55582 >seq1 Length=1509180 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | || ||| | |||||||| ||||| || || || || ||| Sbjct 1005867 ATACCACCACGGAGACGCAGCACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCG 1005808 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || | || ||| |||| || || || || | |||| || || |||||||| Sbjct 1005807 CTAAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGA 1005748 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 |||||||| || || || || || || |||| || | ||||| || |||||| Sbjct 1005747 GGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCG 1005688 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || ||||| || | ||| ||||| || || || || |||||||||||||| Sbjct 1005687 ACCTCGAGGGTGATCGTCTTGCCAGTGAGGGTCTTAACAAAAATTTGCAT 1005638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452003154799680