Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149165.1_202017-01-
09] 8 sequences; 7,873,153 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq5 118 2e-21
seq1 109 1e-18
>seq5
Length=703599
Score = 118 bits (130), Expect = 2e-21
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| || | ||| ||||||||||| || |||||| |||| ||||||||| || ||
Sbjct 231832 CGCAGGCGCAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTG 231891
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||| ||||||||||| ||||||||||| || ||||| ||||||||| || ||
Sbjct 231892 CGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGGATACCC 231951
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| ||||| |||||| |||| ||||| | | || || || |
Sbjct 231952 TCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCGAGG 232011
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||||||||| || || || || || || || | |||
Sbjct 232012 GTGATCGTCTTCCCGGTAAGGGTCTTGACGAACACTTG 232049
Score = 95.1 bits (104), Expect = 3e-14
Identities = 103/137 (75%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| || | |||||||||||| || || |||||| |||| ||||||||| || ||
Sbjct 142043 CGCAGACGCAGGACAAGGTGCAGCGTGCTCTCCTTCTGGATATTGTAGTCACTCAGGGTA 141984
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| |||||| ||||| ||||| || || ||||| || |||||||||||||| ||| ||
Sbjct 141983 CGTCCATCCTCCAGTTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGCGGAATGCCC 141924
Query 199529 TCTCGCTCCTGAATCTT 199545
|| ||||| |||||
Sbjct 141923 TCCTTGTCCTGGATCTT 141907
>seq1
Length=1509180
Score = 109 bits (120), Expect = 1e-18
Identities = 157/219 (72%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAA-GT 199467
|| || | ||| || | ||| || || |||||| || | ||||||||| || || ||
Sbjct 1005858 CGGAGACGCAGCACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTC-GCTAAGCGT 1005800
Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527
| ||||| ||||||||||| ||||| || || |||||||| ||||||||| ||| ||
Sbjct 1005799 GCGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAGGAATGCC 1005740
Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587
|| ||||| ||||| ||| || || | ||||| | | || || || |
Sbjct 1005739 CTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACCTCGAG 1005680
Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||||||||| || ||||| || || |||||||||||
Sbjct 1005679 GGTGATCGTCTTGCCAGTGAGGGTCTTAACAAAAATTTG 1005641
Score = 100 bits (110), Expect = 7e-16
Identities = 155/219 (71%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAA-GT 199467
|| || | ||| || | ||| || || |||||| || | ||| ||||| || || ||
Sbjct 1006086 CGGAGACGCAGCACCAAGTGTAGCGTGCTCTCCTTCTGAATGTTATAGTC-GCTAAGCGT 1006028
Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527
| ||||| ||||||||||| ||||| || || |||||||| ||||||||| ||| ||
Sbjct 1006027 GCGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAGGAATGCC 1005968
Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587
|| ||||| ||||| ||| || || | ||||| | | || || || |
Sbjct 1005967 CTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACCTCGAG 1005908
Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||||||||| || ||||| || || ||||| |||||
Sbjct 1005907 GGTGATCGTCTTGCCAGTGAGGGTCTTGACAAAGATTTG 1005869
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178921479160536
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |