Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149165.1_202017-01- 09] 8 sequences; 7,873,153 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq8 410 1e-109 seq1 150 2e-31 seq5 122 9e-23 seq4 107 2e-18 >seq8 Length=440579 Score = 410 bits (454), Expect = 1e-109 Identities = 593/827 (72%), Gaps = 25/827 (3%) Strand=Plus/Plus Query 132627 CTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGC 132686 ||| ||||| || | || |||| | || ||| | |||||| || |||||||| | Sbjct 41747 CTCGAAAAAGTTCGACTTGCCCTGGAGCGAGATGTTCTCCATAAAGTCGAAGGGGTTCGT 41806 Query 132687 TGTGTTGTAGTGCTTGG---TGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTC 132743 | |||||||||||| | |||||| ||| ||||||||| | ||| ||||| ||||| Sbjct 41807 CGAGTTGTAGTGCTTCGGGTTGCCGA---GGTTGACGAGCAGGCGGTCCGCCACAAACTC 41863 Query 132744 GATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACGCACCGGCAGCGCTTCGG 132802 ||||| || ||||| | ||| | | | || | ||| || |||| || || | Sbjct 41864 AATGTACTGGCACATGAGGCGCGCGTTCATG-CCGATCAGCGAAACAGGCAAGGCGTCAG 41922 Query 132803 TGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGAT----TTCCCTAACGCGCGCC 132858 | | |||| ||||| ||||| || || ||||||| ||| ||| || | | Sbjct 41923 TCAAAAAGTCCTGCTCAATGGCCACAGCCTCGGTGATGATGCGGTTCACTGTGTCAGGGT 41982 Query 132859 GCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCC 132918 |||| || || || || |||||| | || ||||||||| |||| |||| Sbjct 41983 GCGCACGCTTCTT----CAGGTGGCTGAACAGGAGACAGGCAAAGTCGGTGTGCAGGCCC 42038 Query 132919 TCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTG 132978 || || | || ||||| ||||| ||| | || || |||||||||||||| || ||| Sbjct 42039 TCATCGCGCGAGATGAGCTCGTTCGAGAACGACAGACCAGGCATGAGGCCGCGCTTCTTG 42098 Query 132979 AGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCC 133038 ||||| || |||| ||| || |||||| || |||| |||||||||||| || || ||| Sbjct 42099 AGCCAGAAGATGGAGGCAAACGAGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGGCC 42158 Query 133039 ACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCC 133098 || |||||||| ||||| ||| || | |||||||||||| ||||| |||||| Sbjct 42159 ACAAGGCGCTCCGAGAACGAGGCGCGCCTGTCCGAGATCCAGCGCAGGGCCCACTCGGCC 42218 Query 133099 TTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCA--ACAAACGGAGTTTCTCTTCCG 133156 || | |||||| || ||||| ||||| ||||| | | |||| | || |||| Sbjct 42219 TTCTGCTTGACGACGGGGATCGTCTCGATAGCGTTGAAGAGAAACTCA--CGCTGCTCCG 42276 Query 133157 AGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGG 133216 || | ||| |||||||||||| ||| ||| | |||||||| | ||||||||| Sbjct 42277 GCTCGCGGATGTACGTGTCGATGAGGAGCGAGTACGTCTCCGAGTGGATGTTCTCCATCA 42336 Query 133217 CGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGC-GAAACGC 133275 ||| || |||||||| ||||| || |||||| | ||||||| || | || ||| ||| Sbjct 42337 TGATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGCGGCCTGCACCTC-GGCGCTGAAGCGC 42395 Query 133276 TCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTG 133335 |||||||| || ||||||||||| ||||| || || || |||||||| ||||| | Sbjct 42396 TCGACCAGGTTCTCGTTGACGATACCGTCCGAAGCAGCAAAGAAGGCCAGGACGTGGCTC 42455 Query 133336 ATGAAATGGCGCTCGTTGTCGTTCAAGC---GCTCCCAGTCGCGCGTGTCCTTGGACAGG 133392 | || |||||||| |||||||||| || | ||||||||| || |||||| || ||| Sbjct 42456 ACAAAGTGGCGCTCATTGTCGTTCATGCGGTGGTCCCAGTCGTGCAAGTCCTTCGAGAGG 42515 Query 133393 TCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 |||| ||||||| ||||||| ||||| |||||||| || |||||||| Sbjct 42516 TCCATCTCCTCGGCGGTCCAGAACGAGGCCTCGGCCTTCTTGTACAT 42562 >seq1 Length=1509180 Score = 150 bits (166), Expect = 2e-31 Identities = 168/219 (77%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 ||||||||| || || || || ||||| ||||| || |||||| |||| |||||| | | Sbjct 1005637 AATGCAAATTTTTGTTAAGACCCTCACTGGCAAGACGATCACCCTCGAGGTCGAGTCGTC 1005696 Query 38303 CGACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | || || | | || | || |||| ||||| ||||| ||||| | |||| Sbjct 1005697 GGACACGATTGACAATG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACC 1005755 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||||| || |||| || ||||| |||||||| || | ||||| || | |||||||| Sbjct 1005756 AACAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTTAGCGACTACA 1005815 Query 38422 ACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGT 38459 |||| || ||||| ||| |||||||| |||||||||||| Sbjct 1005816 ACATTCAGAAGGAGAGC-ACGCTGCACTTGGTGCTGCGT 1005853 Score = 141 bits (156), Expect = 9e-29 Identities = 173/231 (75%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || ||||| ||||| || |||||| |||| |||||| | | Sbjct 1005866 ATGCAAATCTTTGTCAAGACCCTCACTGGCAAGACGATCACCCTCGAGGTCGAGTCGTCG 1005925 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | || || | | || | || |||| ||||| ||||| ||||| | ||||| Sbjct 1005926 GACACGATTGACAATG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCA 1005984 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| || |||| || ||||| |||||||| || | ||||| || | |||||| || Sbjct 1005985 ACAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTTAGCGACTATAA 1006044 Query 38423 CATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 ||| || ||||| ||| ||||| || |||||||||||| | | || |||| Sbjct 1006045 CATTCAGAAGGAGAGC-ACGCTACACTTGGTGCTGCGTCTCCGTGGTGGCC 1006094 >seq5 Length=703599 Score = 122 bits (134), Expect = 9e-23 Identities = 158/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||| | ||||| || || || || || || || |||||| |||| || ||| | || Sbjct 232052 ATGCAAGTGTTCGTCAAGACCCTTACCGGGAAGACGATCACCCTCGAGGTGGAGTCTTCC 231993 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | || |||| ||||| ||||| || || | |||||| Sbjct 231992 GACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAA 231933 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| ||||| |||||||| || | ||||| || | |||||||||| Sbjct 231932 CAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACGCTGAGCGACTACAAC 231873 Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCG 38458 ||||| ||||| ||| ||||| || | |||||||| Sbjct 231872 ATCCAGAAGGAGAGC-ACGCTCCACCTTGTGCTGCG 231838 >seq4 Length=1203039 Score = 107 bits (118), Expect = 2e-18 Identities = 155/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || ||||| || || ||| | || |||||| | | Sbjct 405942 ATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATTACCCTTGAGGTCGAGTCGTCG 406001 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | || |||| ||||| ||||| || || | |||||| Sbjct 406002 GACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAA 406061 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| || || ||||| || |||| ||||| || | |||||||||| Sbjct 406062 CAGCGTCTGATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTGAGCGACTACAAC 406121 Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCG 38458 || || ||||| ||| || ||||| | ||||| || Sbjct 406122 ATTCAGAAGGAGAGC-ACCCTGCACCTTGTGCTTCG 406156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172749982720