Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149165.1_202017-01-
09] 8 sequences; 7,873,153 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq4 107 2e-18
seq1 84.2 2e-11
>seq4
Length=1203039
Score = 107 bits (118), Expect = 2e-18
Identities = 267/401 (67%), Gaps = 6/401 (1%)
Strand=Plus/Minus
Query 29988 CACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGG 30047
|||| | ||||| || | | || || || ||||| |||||| | ||| || ||||
Sbjct 577084 CACGAAGAACTGGCAGAGAATATGACAAGGTGGAAGCGCCATGTTGTCCAGATCGATGGG 577025
Query 30048 GTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGC 30107
|||||| |||| || | ||||||| ||| |||||| || |||| | || | | |
Sbjct 577024 GTTCCATGCGCTCAGTAAAATGCGCCGGTCCGTTGGGTTCGTCTTGATTTGTTCGATGAC 576965
Query 30108 GTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATG-TCCGTGTACTCTG 30166
|| || ||||| || ||| ||| ||||| || ||| ||| |||| |
Sbjct 576964 GTGGGCGAGTTGATCGACACCCTGACCCTGGTAGT-TGGTATCAGCATCCACATACTTCG 576906
Query 30167 CTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCT 30226
| || || || | ||| ||||| |||||||| || |||||||| || || | ||||
Sbjct 576905 CGCCAAAGTGGCGCCATTGGAAGCCGTACACTGGACCCAGGTCACCTTCACGGCGGTGCC 576846
Query 30227 CGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCT 30286
| | || | ||| | || ||| || ||||||| ||| | |||||||| | ||| |
Sbjct 576845 CAAGTCCGCGCTTCTGCAGAAATTCGGTGGAACCATTGCCATCCCAGATGTGTACAT--T 576788
Query 30287 TC--TCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCAC 30344
|| || |||| || |||| ||| ||| | ||||||||||||||| ||||
Sbjct 576787 TCGTTCACTGAGCCACTTAGAGTCCGTGCGCCCGGCAATGAACCACAGCAGCTCTTCCAG 576728
Query 30345 GACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAA 30385
||| | ||||||| | ||| || || | |||||||
Sbjct 576727 CACGCCACGGTAAAAGACACGCTTCGTTGTCAAAAGGGGAA 576687
>seq1
Length=1509180
Score = 84.2 bits (92), Expect = 2e-11
Identities = 167/242 (69%), Gaps = 18/242 (7%)
Strand=Plus/Minus
Query 51963 GAGGGCTACCTGGACAGGGTGACTGTG---GACGTGGACTCTGACGGCAAGAAGCTCGTC 52019
||||||||| ||||| |||| | | ||| |||||| ||| ||| |||||||
Sbjct 879646 GAGGGCTACGTGGACCAGGTGCTTATCAGCGACACGGACTCGGACC---AGACGCTCGTC 879590
Query 52020 AAGGTGAGGCTGAGGACCCCCAGGCAC-----CCAGAGATGGGCGACAAGTTTGCGTCG- 52073
|||| | || | || |||| | | |||||| ||||||||||||| |||||
Sbjct 879589 AAGGCG---CTCAT--CCGCCAGACGCGGCGGCCAGAGCTGGGCGACAAGTTCTCGTCGC 879535
Query 52074 TTCACGGCGCAAAAGGGGACGTGCGGAGCCGTCCTGACCCAGGAGGACATGCCCTTCGAC 52133
|||||| |||||||| ||| || | || | ||||||||| |||| ||| |
Sbjct 879534 GCCACGGC-CAAAAGGGCGTGTGTGGTCTGATTGTGCCGCAGGAGGACCTGCCGTTCACC 879476
Query 52134 AAGGACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCATCCAGGATGACC 52193
| ||||| | |||||| ||||||| |||||||||| ||| || || | |||||
Sbjct 879475 GACGACGGTATCCACCCCGACATCATCATGAACCCCCACGGCTTCCCGTCGCGTATGACG 879416
Query 52194 GT 52195
||
Sbjct 879415 GT 879414
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408617560159784
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |