Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149165.1_202017-01- 09] 8 sequences; 7,873,153 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq8 266 6e-66 >seq8 Length=440579 Score = 266 bits (294), Expect = 6e-66 Identities = 645/962 (67%), Gaps = 21/962 (2%) Strand=Plus/Minus Query 221714 GCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGG 221773 |||||||| ||||| || ||||||| | | |||| || ||||| || |||||| Sbjct 55005 GCCAGGTTGCACACAGCTGTCTCGTCCGGCGAGCTGTACTCGATAATCTCCGTGCAGAGG 54946 Query 221774 TTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTG 221833 || || |||||| || ||||||| || || ||| |||||| || || | ||||||| Sbjct 54945 TTCGAGCTCTTGATCGTGCCCAGGTTCTTCTGGTTACTCTTGCGGTTCGCCGAGTCCTTG 54886 Query 221834 TAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCT 221893 || || | ||| ||| ||| ||||| | || ||| | || || || ||| || | | Sbjct 54885 TACAGGACAAAAGGATTGCCCGTCTCAATTTGCGCCTCGAGGATAGCGTACCACAGCT-T 54827 Query 221894 CTG-GCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCAT 221952 ||| || | || | | |||| | |||||| || | | | || || ||||||| Sbjct 54826 CTGCGCCTTGACAGAGCGCTTGGCGCGGCCCTCGCGCTCGTACTTCTCG-TACAGAGCAT 54768 Query 221953 GTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACT 222012 |||||| || || || || |||| ||||| ||| |||||| |||||||| Sbjct 54767 --CAAACTCCTCGCCATAGCAGTCAGCCAGACCTGGGCACTCGGCGGGGCACATCAGCGA 54710 Query 222013 CCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAA 222072 ||||| ||| | || ||| | ||||||| || || || |||||||||||| | || Sbjct 54709 CCAGTCGCCGTTCTGTTCGACACGGCGCATGAACAGATCGGGAATCCACAGCGCCAGGAA 54650 Query 222073 GAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAA 222132 || || | | ||| |||||| ||| | ||| || | |||||| | ||| ||||| Sbjct 54649 CAGGTCGCGCGCGCGCACTTCCTCCTTGCCATGGTTCTTGCGCAGATCAATAAATTCAAA 54590 Query 222133 AATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACC 222192 || ||| | ||||||||||||||| |||| || | ||||| || ||||||||||| || Sbjct 54589 AACGTCCGAGTGCCACGGCTCCAGGTAGATCGCAAAGGCGCCCGGGCGCTTGTTGCCGCC 54530 Query 222193 CTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGA 222252 ||| ||||| | | || |||| | | ||| || | || || | |||||| Sbjct 54529 CTGGTCCACGTAGCGCGCCGTGTTGTTGTACACGCGGAGCATGGGCACAATACCGTTGCT 54470 Query 222253 TCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAG-ACATGC 222311 |||||| ||||| ||||||| || || | | ||| ||| | || | Sbjct 54469 CACACCGTTCGTGCCGGCGATGTACGAGCCCGTCGCACGAATGTT-GTGGATGTTCAGAC 54411 Query 222312 CGATACCACCGG-CGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCC 222370 | ||||| |||| ||| || | |||||| || ||| ||||||| ||||| || ||| Sbjct 54410 CAATACCGCCGGCCGTCTTGC-TGATCATCGCACAGGTCTTGAGCGTGTCGTATATACCC 54352 Query 222371 TCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAA 222430 || || ||||| ||||| | ||| || || || |||||||| || | |||| | Sbjct 54351 TCGATCGAGTCGTCCTTCATACTCACAAGGAAGCACGACGACATTTGGGGGTTGGGCGTG 54292 Query 222431 CAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCC--CCTAGACATCAGATCGT 222488 | ||| || ||||| || || |||||||||||| ||| | ||||| | || Sbjct 54291 CCGGCATTGAACAGGGTCGGCGACGCGTGTGTAAAG--GCCTTCTCGGACATGTAGTTGT 54234 Query 222489 ACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACA 222548 ||||||| | | || || | || || ||||| || | |||| | |||| || Sbjct 54233 ACGTCTCGATCGCGCTCGCCACGTCCTCGCCGTGGATGCCGACGGCGACGCGCATGAGCA 54174 Query 222549 TGTACTGGGGCCTCTCCACAGGAC----CCTTGGAGCTGGAGAGCAGGTACGATTTTTCC 222604 ||| |||||| | |||| || || || | || | | |||||||| || || Sbjct 54173 TGTGCTGGGGGCGCTCCGCA--ACCTTGCCATTGATCCG--CAGCAGGTAGGAGCGCTCG 54118 Query 222605 AGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCGGCGTCC 222664 || |||||||| |||||| ||||| || ||||| | ||| || ||| || | ||| Sbjct 54117 AGCGTCTTGAAGCCAAAGAAGTTGTAGTGGAAGTCGCGCTCGTAAATCACCGCCGAGTCG 54058 Query 222665 AG 222666 || Sbjct 54057 AG 54056 Score = 242 bits (268), Expect = 7e-59 Identities = 557/839 (66%), Gaps = 24/839 (3%) Strand=Plus/Minus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533 || || ||| |||||||||||||||| | ||| |||||||||||| ||||| || Sbjct 42574 GAGATCTGGCAGATGTACAAGAAGGCCGAGGCCTCGTTCTGGACCGCCGAGGAGATGGAC 42515 Query 25534 CTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGAC---GAGCAGCATTTTCTC 25590 || | |||||| || ||| |||| || | || ||| |||| || ||| | Sbjct 42514 CTCTCGAAGGACTTGCACGACTGGGACCACCGCATGAACGACAATGAGCGCCACTTTGTG 42455 Query 25591 AAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAG 25650 | |||| |||| |||||||| || || || ||||| || |||||||| ||| |||| Sbjct 42454 AGCCACGTCCTGGCCTTCTTTGCTGCTTCGGACGGTATCGTCAACGAGAACCTGGTCGAG 42395 Query 25651 AGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCC 25710 | |||| | || |||||| || |||||| || |||||||| |||||||| Sbjct 42394 CGCTTCAGCGCCGAGGTGCAGGCCGCCGAGGCCCGCTGCTTCTACGGCTTCCAGATCATG 42335 Query 25711 ATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGA- 25766 || || || | ||||| ||| ||| | ||| || || |||||||| || Sbjct 42334 ATGGAGAACATCCACTCGGAGACGTACTC---GCTCCTCATCGACACGTACATCCGCGAG 42278 Query 25767 -CGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGA 25825 || || | | ||| | || || || |||||| || ||| | ||||| || Sbjct 42277 CCGGAGCAGCGTGAGTTT--CTCTTCAACGCTATCGAGACGATCCCCGTCGTCAAGCAGA 42220 Query 25826 AGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGA-GCGCTACGTTTGGCGAGCGGCTG 25884 |||| ||||||| || |||||| | | ||| |||| |||| ||||| || Sbjct 42219 AGGCCGAGTGGGCCCTGCGCTGGATCT-CGGACAGGCGCGCCTCGTTCTCGGAGCGCCTT 42161 Query 25885 GTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGG 25944 || |||||||| || || ||||||||||||||| || |||||||| ||||||||||| Sbjct 42160 GTGGCCTTTGCCGCCGTCGAGGGCATCTTTTTCTCGGGCTCGTTTGCCTCCATCTTCTGG 42101 Query 25945 CTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGAC 26004 |||||| || || |||||| || |||| || || |||||||||||| | || Sbjct 42100 CTCAAGAAGCGCGGCCTCATGCCTGGTCTGTCGTTCTCGAACGAGCTCATCTCGCGCGAT 42041 Query 26005 GAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCT 26064 ||||| || |||| || |||||||| || || | || ||||| || | || | | Sbjct 42040 GAGGGCCTGCACACCGACTTTGCCTGTCTCCTGTTCA---GCCAC---CTGAAGAAGCGT 41987 Query 26065 TCTCA---AGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTT 26121 | || || || || || | ||||||| |||||||||| || ||| |||| ||| Sbjct 41986 GCGCACCCTGACACAGTGAACCGCATCATCACCGAGGCTGTGGCCATTGAGCAGGACTTT 41927 Query 26122 CNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATAC 26181 | ||||||||| | |||||| |||| ||| Sbjct 41926 TTGACTGACGCCTTGCCTGTTTCGCTGATCGGCATGAACGCGCGCCTCATGTGCCAGTAC 41867 Query 26182 ATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTACAGTACG 26241 ||||||| |||||| |||| ||||| | | || || | | | | ||||| || Sbjct 41866 ATTGAGTTTGTGGCGGACCGCCTGCTCGTCAACCTCGGCAACCCGAAGCACTACAACTCG 41807 Query 26242 CCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGA 26300 | ||||| |||||||||||||| ||||| ||| | | || ||| | ||||| || || Sbjct 41806 ACGAACCCCTTCGACTTTATGGAGAACATCTCGCTCCAGGGCAAGTCGAACTTTTTCGA 41748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844707115520