Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149165.1_202017-01-
09] 8 sequences; 7,873,153 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq3 129 2e-24
seq1 120 9e-22
seq6 96.9 1e-14
>seq3
Length=1354264
Score = 129 bits (142), Expect = 2e-24
Identities = 260/386 (67%), Gaps = 0/386 (0%)
Strand=Plus/Minus
Query 302491 TCAATTCCGTCATCGCCGTAGGAATACTGAATGATTTTGTTCTTGTTATTTCTTACGGTC 302550
||||| || || || ||||| | | ||| ||| | ||||| | || | ||| ||
Sbjct 1328765 TCAATACCATCTTCACCGTACGCAAACTCAATTACATTGTTGGTAGAGTTGCGTACAGTT 1328706
Query 302551 ATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCA 302610
|||||| | ||| | | || || | | ||| | ||||||||||| || ||||||
Sbjct 1328705 CCATCATAGCAAATAGTTACATCCTCAAGAGCCTTCACCAAACGACGCTGGATGTAACCA 1328646
Query 302611 GTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAG 302670
||| || |||||| ||||| |||||||| ||||| |||||||| |||| |||||||||
Sbjct 1328645 GTTTCAGCTGTTTTCACAGCAGTATCAATCAGACCTTCACGACCAGCCATGGCATGGAAG 1328586
Query 302671 AATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCG 302730
|| | || | || | || || | || | | || ||||||| || || || |||
Sbjct 1328585 AAGAATTCATGCGCTGTAAGACCTCGAAGATACGAATTCTCAACAAAGCCTCGACTTTCG 1328526
Query 302731 GGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATA 302790
|| | |||| ||||| || |||||||| ||| | | ||| | || |||
Sbjct 1328525 GGGGTGAAGTCGTCTTTGGTGAAATGTGGCAGACTCCGATGGCGGAAACCGAACGGAATA 1328466
Query 302791 CGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCA 302850
||||| || || || |||||| || | || | | ||| |||||||| || | | |
Sbjct 1328465 CGCTTGCCTTCCACCGACTGCTGACCGACACAAGCAGACATTTGCGAAATGTTGATAAAA 1328406
Query 302851 CTGCCCTTGGAGCCAGCATTTACCAT 302876
||||| || || || |||||||
Sbjct 1328405 GAACCCTTTGAACCCGCGATTACCAT 1328380
>seq1
Length=1509180
Score = 120 bits (132), Expect = 9e-22
Identities = 127/166 (77%), Gaps = 1/166 (1%)
Strand=Plus/Minus
Query 251487 ACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAGC 251546
||||||||| |||||||| || |||||||| ||||| ||||| |||||||| |||||
Sbjct 736174 ACCGTGTGAGATCATACAGTCGCGCTCCATCTCACCAAAACGCAGACCACCGTCGCGGCT 736115
Query 251547 CCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGTTG 251606
| ||||||| ||||||| || || ||| | || |||||| | |||||| ||
Sbjct 736114 GCGACCCTCGACAGGCTGCCGCGTAAGAATCTGCACGGGACCGCGCGCGCGGCTGTGGAT 736055
Query 251607 CTTATCATTTACCATATGCTTGAGACGCTGGTAGAATG-CGGGACC 251651
||| || | ||||| ||||| |||||||||||| ||| |||| ||
Sbjct 736054 CTTGTCGTCCACCATGTGCTTCAGACGCTGGTAGTATGTCGGGCCC 736009
Score = 84.2 bits (92), Expect = 6e-11
Identities = 103/138 (75%), Gaps = 6/138 (4%)
Strand=Plus/Minus
Query 251835 CAGTTGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTT 251894
||| || |||| |||||||||||||| || || || || |||||||| |||||||| |
Sbjct 735826 CAGATGCCCGATGGTCATACGACTGGGGATGGCGTGCGGGTTGATGATAATGTCGGGCGT 735767
Query 251895 CAGTCCATCAGCAGTGAAGGGCATATCCTTTTCCT--CAATA-ATGTTTCCAATAGTTCC 251951
| || ||||| ||||| |||| ||| ||||| | || || | ||||| || ||
Sbjct 735766 AATACCCTCAGCCGTGAACGGCAGATC---TTCCTGGCGGTACGTGATGCCAATGGTACC 735710
Query 251952 CTTTTGTCCGTGACGAGA 251969
||| |||||||| || ||
Sbjct 735709 CTTCTGTCCGTGGCGCGA 735692
>seq6
Length=634830
Score = 96.9 bits (106), Expect = 1e-14
Identities = 144/202 (71%), Gaps = 2/202 (1%)
Strand=Plus/Minus
Query 289026 TTTACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGA-ATTTTGTCTCGCAA 289084
||| |||| ||||| |||||||| | ||| || | |||||| | ||||| | | ||
Sbjct 562028 TTTGCCAATCGCATCGATTTCGTCCACGAAGATGATACACGGTGCCATTTTCT-TGGCCG 561970
Query 289085 TTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAG 289144
||||||| | || | || || |||| |||| ||||||| ||||||| ||||||||||
Sbjct 561969 TTGCAAACATATCACGCACGCGAGATGGACCAACACCAACAAACATTTCCACAAATTCAG 561910
Query 289145 AAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTG 289204
| | ||||| | ||||| ||| |||||| ||||| ||| | || | || |
Sbjct 561909 ATCCAGATACGGACAAGAATGGAACACCTGCTTCACCTGCAGTAGCCTTTGCAACTAGCG 561850
Query 289205 TCTTACCTGTTCCAGGTGGTCC 289226
| || ||||| || || |||||
Sbjct 561849 TTTTGCCTGTACCGGGGGGTCC 561828
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471817449138696
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |