Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149165.1_202017-01- 09] 8 sequences; 7,873,153 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq8 217 2e-50 seq4 141 1e-27 seq1 122 1e-21 seq3 109 7e-18 >seq8 Length=440579 Score = 217 bits (240), Expect = 2e-50 Identities = 281/390 (72%), Gaps = 15/390 (4%) Strand=Plus/Minus Query 1630062 GCACTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTT 1630121 || |||||| |||||||||||||||| ||| | ||||||||||||||||| | ||||| Sbjct 54532 GCCCTGGTCCACGTAGCGCGCCGTGTTGTTGTACACGCGGAGCATGGGCACAATACCGTT 54473 Query 1630122 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAA 1630181 | | | ||||| ||||| || | ||| | ||| | || || | ||||| | | Sbjct 54472 GCTCACACCGTTCGTGCCGGCGATGTACGAGCCCGTCGCACGAATGTTGTGGATGTTCAG 54413 Query 1630182 GCCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCC 1630241 || || |||||||||| |||| ||| | ||| || |||||||||||||| || || Sbjct 54412 ACCAATACCGCCGGCCGTCTTGCTGATCATCGCACAGGTCTTGAGCGTGTCGTATATACC 54353 Query 1630242 CTCGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGT 1630301 ||||||||||||| ||||||| ||| || ||||||||||| |||| |||| | ||| Sbjct 54352 CTCGATCGAGTCGTCCTTCATACTCACAAGGAAGCACGACGACATTTGGGGGTTGGGCGT 54293 Query 1630302 GCCGGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTA 1630361 |||||| ||||| || || |||| ||| || || || | |||||| || ||| Sbjct 54292 GCCGGCATTGAACAGGGTCGGCGACGCGTGTGTAAAGGCCTTCTCGGACATGTAGTTGTA 54233 Query 1630362 GGTGGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGC 1630421 || ||| | ||| ||||| ||||| || || | | ||||| ||| Sbjct 54232 CGTCTCGATCGCGCTCGCCA------CGTCCTCG---------CCGTGGATGCCGACGGC 54188 Query 1630422 GACGCGCATGAGCATGTACTGGGGCCGCTC 1630451 ||||||||||||||||| |||||| ||||| Sbjct 54187 GACGCGCATGAGCATGTGCTGGGGGCGCTC 54158 Score = 187 bits (206), Expect = 3e-41 Identities = 216/289 (75%), Gaps = 3/289 (1%) Strand=Plus/Plus Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690 |||||||||||||||| || ||||||||||||||| ||| | |||| || | | Sbjct 42316 CCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGCGGCCT 42375 Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750 | ||||| |||| || || ||||||||||| ||||| ||||| || || | Sbjct 42376 GCACCTCGGCGCTGAAGCGCTCGACCAGGTTCTCGTTGACGATACCGTCCGAAGCAGCAA 42435 Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCGACA--CCCAGT 869807 | || ||||||||||| | | |||||||||||| | |||| | | ||| |||||| Sbjct 42436 AGAAGGCCAGGACGTGGCTCACAAAGTGGCGCTCATTGTCGTTCATGCGGTGGTCCCAGT 42495 Query 869808 GGACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTT 869867 | ||| |||||||| ||||||||||||||||| ||||||||||||||| | Sbjct 42496 CGTGCAAGTCCTTCGAGAGGTCCATCTCCTCGGCGGTCCAGAACGAGGCCTCGGCCTTCT 42555 Query 869868 TGTACATCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCG 869916 ||||||||| ||| | | ||||||||||| ||||||||||||||||| Sbjct 42556 TGTACATCTGCCAGATCTCGTGGTAGCGGATCGGGAAGAGGACAAAGCG 42604 Score = 176 bits (194), Expect = 6e-38 Identities = 184/242 (76%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 |||||||| || ||| | ||||| |||||||||||||| | |||||||| ||||||||| Sbjct 41721 GCCTTGGCATAGTCGGCAACGCGGCGCTCGAAAAAGTTCGACTTGCCCTGGAGCGAGATG 41780 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 |||||| | ||| ||||| | || ||||||||||| | ||||| || Sbjct 41781 TTCTCCATAAAGTCGAAGGGGTTCGTCGAGTTGTAGTGCTTCGGGTTGCCGAGGTTGACG 41840 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 ||||||||||| || |||||||| ||||||||||||||||||| |||||||||||||| Sbjct 41841 AGCAGGCGGTCCGCCACAAACTCAATGTACTGGCACATGAGGCGCGCGTTCATGCCGATC 41900 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 |||| || |||| | || ||| ||| || | ||| || | || |||||| |||| Sbjct 41901 AGCGAAACAGGCAAGGCGTCAGTCAAAAAGTCCTGCTCAATGGCCACAGCCTCGGTGATG 41960 Query 868931 AT 868932 || Sbjct 41961 AT 41962 Score = 129 bits (142), Expect = 7e-24 Identities = 183/253 (72%), Gaps = 11/253 (4%) Strand=Plus/Plus Query 869216 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAA 869275 || || |||||||||||||||||||||||||| ||||||| | || |||||||||| Sbjct 42072 AGACCAGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGGCAAACGAGCCCGAGAAA 42131 Query 869276 AAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCC 869335 |||||||||||||||||||||||| | | || ||||| | || |||||| | || Sbjct 42132 AAGATGCCCTCGACGGCGGCAAAGGCCACAAGGCGCTCCGAGAA-----CGAGGCGCGCC 42186 Query 869336 TTGT---TGATCCACTTCATCGCCCAGTCGGCCTTTTTCCTCACCGAC-GGCACCGTGTC 869391 ||| |||||| || ||||| |||||||| | | | | |||| || | ||| || Sbjct 42187 -TGTCCGAGATCCAGCGCAGGGCCCACTCGGCCTTCTGCTTGA-CGACGGGGATCGTCTC 42244 Query 869392 GATGGCGCGAAAGAGGTGGTCCTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAG 869451 ||| ||| ||||| || | |||| || || || |||||||| ||||| Sbjct 42245 GATAGCGTTGAAGAGAAACTCACGCTGCTCCGGCTCGCGGATGTACGTGTCGATGAGGAG 42304 Query 869452 CGAATAGGTCTCC 869464 ||| || |||||| Sbjct 42305 CGAGTACGTCTCC 42317 Score = 118 bits (130), Expect = 1e-20 Identities = 289/443 (65%), Gaps = 8/443 (2%) Strand=Plus/Minus Query 1628162 ACTGGACGATCTCGGTGCACAGGTTGGCCGACGTCGTCGTACCCAGGTTCTGCTGGTTGG 1628221 ||| || ||||| ||||| ||||| | | | |||| |||||||||| |||||| Sbjct 54968 ACTCGATAATCTCCGTGCAGAGGTTCGAGCTCTTGATCGTGCCCAGGTTCTTCTGGTTAC 54909 Query 1628222 TGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCCG 1628281 | | |||| | | |||||||| || | | || ||| ||||| || |||||| Sbjct 54908 TCTTGCGGTTCGCCGAGTCCTTGTACAGGACAAAAGGATTGCCCGTCTCAATTTGCGCCT 54849 Query 1628282 CGACGATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCCGC---GCGCGGCCCTNNN 1628338 ||| ||| || |||| | || |||| | ||||| ||| |||||||||| Sbjct 54848 CGAGGATAGCGTACCACAGCTTCTGCGC---CTTGACAGAGCGCTTGGCGCGGCCCTCGC 54792 Query 1628339 NNNNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGCG 1628398 ||||| || |||| ||||| || ||| || || Sbjct 54791 GCTCGTACTTCTCGTACAGAGCATCAAACTCCTCGCCATAGCAGTCAGCCAGACCTGGGC 54732 Query 1628399 CCTCGGACGGACAAAAGAGCGACCAGTCGCCAC-CGGTCACCGCGCGGCGCATAAAGAGG 1628457 ||||| || || | |||||||||||||| | || | | |||||||| || || Sbjct 54731 ACTCGGCGGGGCACATCAGCGACCAGTCGCCGTTCTGTT-CGACACGGCGCATGAACAGA 54673 Query 1628458 TCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTC 1628517 || ||||||| || || ||||||||||| || ||||||||||| |||||| Sbjct 54672 TCGGGAATCCACAGCGCCAGGAACAGGTCGCGCGCGCGCACTTCCTCCTTGCCATGGTTC 54613 Query 1628518 TTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAG 1628577 || || || | | || | || ||| | ||||||||||||||||||| |||||| Sbjct 54612 TTGCGCAGATCAATAAATTCAAAAACGTCCGAGTGCCACGGCTCCAGGTAGATCGCAAAG 54553 Query 1628578 GCGCCCTTGCGCTTGCCGCCGCC 1628600 |||||| ||||||| |||||| Sbjct 54552 GCGCCCGGGCGCTTGTTGCCGCC 54530 Score = 91.5 bits (100), Expect = 2e-12 Identities = 109/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 1627334 GGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGTTGGTGATGA 1627393 |||||||||| || || || | ||||| |||||| |||| |||||| | ||| Sbjct 55589 GGTTGACCACCTGGAACTCACCGGCAAGCACACGGCGCATGTAAATGTTGCTCGTGTACG 55530 Query 1627394 CCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCA 1627453 ||| | |||| || ||| |||||||| ||| | |||||| |||||| |||||| Sbjct 55529 GCTCAAAGCACTCGTTGAAGCCAAGGATCTGACTCGTGGAGGCCGTCGGCATGGGCGCCA 55470 Query 1627454 CGAGGAGCGAGTTGCGCAGGCCGTGCTG 1627481 || |||||||||||||| |||||||| Sbjct 55469 TCAGCAGCGAGTTGCGCAGACCGTGCTG 55442 >seq4 Length=1203039 Score = 141 bits (156), Expect = 1e-27 Identities = 343/509 (67%), Gaps = 19/509 (4%) Strand=Plus/Minus Query 1726679 AAGGTATGCGGCTGGGCGGCGGCGCGCACGGCGTCGAGTGCCGTCGCCAC-GCTCCCGTC 1726737 |||| |||||||| | | ||||| | || |||| || | ||||| || ||||| Sbjct 444681 AAGGCGTGCGGCTGCGACGACGCGCGGATCGCATCGACCGC-GACGCCAATGCCGCCGTC 444623 Query 1726738 GGTGCCGTTCTTGAAGCCGATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGCACCTG 1726797 || |||||||||||| || | ||||| ||| ||||| | | ||||||||||| ||| Sbjct 444622 CGTAGAGTTCTTGAAGCCAATCGGCAGCGACAGGCCCGACACAAGCTCGCGGTGCAGCTG 444563 Query 1726798 GCTCTCGGTCGTGCGCGCGCCCACGGCGCCCCACGCCACCAGGTCTGCCAAATAAGGGGC 1726857 ||||||||| |||||||| | ||||||||||| ||| || | || || ||| Sbjct 444562 CGACTCGGTCGTACGCGCGCCGATCGCGCCCCACGCGTACAGATCCGACAGGTACTGGGG 444503 Query 1726858 CACCAGAGGACTGAGAAACTCGACGGCCACGGGCTGATCGACGGCGACGACGAGATCGCG 1726917 | | | ||| | |||| ||||| ||| | | | || | | || Sbjct 444502 CGAGATCGTGTCGAGCACCTCGCACGCCACAGGCAGGCCAATCTCGTTAATG---TCAAT 444446 Query 1726918 CAACAGGCGGCGCGACGCCGT-CAGGCCGTCGGCCAGGCGGCACGACCCGTCGAGGTCGG 1726976 || ||| |||||| | || ||||||| | | || |||| |||||||||| | Sbjct 444445 CAGCAGCTGGCGCG-CAATGTGCAGGCCGCGGTTGATCTGGAACGAGCCGTCGAGGTTCG 444387 Query 1726977 GGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAGGCGCGC- 1727035 ||||| || ||| |||||||| |||||||||||||||||||| || | ||||| ||| Sbjct 444386 GGTCGTTGATCAGACCCTTCCAGCCGACGGTCGTGCGCGGCTTCTCAAAGTAGGCCCGCA 444327 Query 1727036 --ATGACCACGCAAAGCGCGT-CGCCGACCTCGTCTCGGACAAAGGCGC--GCAGGCGTC 1727090 |||||||| ||| | | | | | | || |||| | | | | |||||| | Sbjct 444326 TAATGACCAC---AAGACCATCCTTCCAGCGCGCCTCG---TATGCCTCCTTCAGGCGGC 444273 Query 1727091 GGCCATAGTCGACGACGGCCGCCGGGTCGTGCGCCGAACACGGACCAACGATAACCAGCA 1727150 | |||||||| ||||| | |||||||| ||| ||||| || || || ||||||| Sbjct 444272 GAGCATAGTCGCGCGCGGCCTCAGGGTCGTGGATCGAGCACGGGCCGACAATCACCAGCA 444213 Query 1727151 GCCGCCGGTCGGTCCCGTCGAGCACGCGC 1727179 | || ||| ||||| || ||| ||| Sbjct 444212 GGCGGTCGTCCTGCCCGTGGATCACACGC 444184 >seq1 Length=1509180 Score = 122 bits (134), Expect = 1e-21 Identities = 323/478 (68%), Gaps = 45/478 (9%) Strand=Plus/Minus Query 733076 GCGCCAGCCCGAGTTGGGCGACAAACTGTCGTCGCGCCACGGCCAAAAGGGC-ACCGTGG 733134 ||| | ||| ||| |||||||||| | |||||||||||||||||||||||| |||| Sbjct 879569 GCGGCGGCCAGAGCTGGGCGACAAGTTCTCGTCGCGCCACGGCCAAAAGGGCGTGTGTGG 879510 Query 733135 GCAGCGTGCGCTCCACCGAGGACATGCCCTGGTCGCCGCGCGGCGG-CGCCACGCCCGAC 733193 | | || || || |||||| |||| | || ||| || ||| |||| |||||| Sbjct 879509 TCTGATTGTGCCGCA-GGAGGACCTGCC--GTTCACCG-ACGACGGTATCCAC-CCCGAC 879455 Query 733194 ATCGTGATCAACCCGCACGCCATCCCGTCGCGCATGACCATGGGCAAGATGCTCGAGGCC 733253 ||| | || ||||| |||| | |||||||||| ||||| | ||||||||| ||||| Sbjct 879454 ATCATCATGAACCCCCACGGCTTCCCGTCGCGTATGACGGTCGGCAAGATGATCGAG--- 879398 Query 733254 CTCCTG---GGCAAGG-TGGCCTGCCGCGAGGGCTACATCGGCGACGGCACGCCCTTTGG 733309 || ||| ||||||| || || ||| |||| | |||||||| |||| || Sbjct 879397 CTGCTGGCCGGCAAGGCCGGTGTG-ATCGATGGCTCGCTGCAGTACGGCACGGCCTTCGG 879339 Query 733310 CGGCGTCACCNNNNNNNNNNNNNNNNNNGAGTTGGCCCGC-CACGGGTGCGAGC---GCT 733365 |||| || | || |||||||| | |||| ||| ||| Sbjct 879338 CGGC-TCGC-----------GCGTCGAGGATATGGCCCGCATCCTCGTGC-AGCACGGCT 879292 Query 733366 AC---------GGCAAGGAGGTGCTCTACCACCCGCAC-ACCGGCGAGCCCATGGCGGCG 733415 || ||||| ||| ||| || | | |||| ||||| || || | | |||| Sbjct 879291 ACAACTACGGTGGCAAAGAGTACCTC-ACGAGCGGCACGACCGGTGAACCGCTCGAGGCG 879233 Query 733416 TTGATCTTCTCGGCGCCGGTCTACTACCAGGCCCTCCGGCACGTGGCCATCGACAAGATC 733475 | | | || | ||| ||||||||||| ||| |||| ||| ||| |||||||| Sbjct 879232 TACGTGTACTTTGGCCCGATCTACTACCAGAAGCTCAAGCACATGGTCATGGACAAGATG 879173 Query 733476 CACGCGCGCCCGCGCGGTCC-CGTGCAGATGCTCACCAAGCAGCCGGTCGAGGGCCGC 733532 ||||||||| ||||||| || ||||| | ||||||| |||||| |||||| ||| Sbjct 879172 CACGCGCGCGCGCGCGGACCGCGTGCCG-TGCTCACGCGCCAGCCGACCGAGGGACGC 879116 Score = 96.9 bits (106), Expect = 4e-14 Identities = 163/236 (69%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 1574004 GGCGTCGACGTCGTGCGCAAGATCATCAAGCACCACGCCTCCAAGAGGATCGACCTGCCG 1574063 ||| ||||||| |||||||| | |||||| || |||| | | |||||| Sbjct 518912 GGCATCGACGTTGTGCGCAACAAGATCAAGGTGTTTGCGCAGAAGAAGGTGTCGCTGCCG 518853 Query 1574064 CCCGGACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAG 1574123 || || |||||| | ||||| ||||||||||| ||| || | ||| ||| || ||| Sbjct 518852 CCGAACCGGCACAAGATCATCATTCTCGACGAGGCGGACAGCATGACGCCGGGTGCGCAG 518793 Query 1574124 CAGGCCCTGCGGTCCACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTGGCGTGC 1574183 ||||| ||||| ||| ||||| | || | ||||||||||| | | |||||| Sbjct 518792 CAGGCGCTGCGTCGCACGATGGAGATCTACGCGCCAACGACGCGCTTCTGCTTTGCGTGC 518733 Query 1574184 AACACGTCGTCGATGGTCATCGAGGCCCTCCAAAGTCGCTGCGCCATTCTGCGCTT 1574239 ||| |||| | | |||| ||| | |||| || ||||| || ||||| || || Sbjct 518732 AACCAGTCGAACAAGATCATTGAGCCGATCCAGAGCCGCTGTGCGATTCTTCGGTT 518677 >seq3 Length=1354264 Score = 109 bits (120), Expect = 7e-18 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 1254350 CAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTT 1254409 ||| ||||| | | |||| || || || ||||||||||| |||| ||| ||| | Sbjct 504437 CAGCTCGCCAGGGAGAATCAAACGAACAGCCGTCTGGATCTCACGCGAAGAGATGGTGCT 504496 Query 1254410 GCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTT 1254469 |||||| || ||||| |||||||||| ||||||| |||| ||||| | Sbjct 504497 CTTCTTGTTGTAGCTGGCCAGCTTCGAGGCCTCGGTGGCGATGCGCTCGAAGATGTCCTG 504556 Query 1254470 GACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTG 1254529 || |||||||| | | | ||| | |||||| ||||| || ||||||||||||||| Sbjct 504557 CACGAACGAGTTGAGAATGGCCATGGCCTTGTTCGAGATACCAGTGTCGGGGTGCACCTG 504616 Query 1254530 CTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 |||||| || ||||||| | | |||||| Sbjct 504617 CTTGAGGACACGGTAGATGTAGGTCGAGTA 504646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107138543482536